RNA–Protein interactions for RNA: ENST00000437597.1

LINC00884-201, long intergenic non-protein coding RNA 884, humanhuman

TSL 3

Gene LINC00884, Length 419 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-201ENST00000437597 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
LINC00884-201ENST00000437597 SETD1BQ9UPS6 1966 aaKnown RBP17.43■□□□□ 0.38
LINC00884-201ENST00000437597 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
LINC00884-201ENST00000437597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00884-201ENST00000437597 ATP10AO60312 1499 aa17.39■□□□□ 0.37
LINC00884-201ENST00000437597 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
LINC00884-201ENST00000437597 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
LINC00884-201ENST00000437597 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
LINC00884-201ENST00000437597 SAMD9Q5K651 1589 aa17.38■□□□□ 0.37
LINC00884-201ENST00000437597 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
LINC00884-201ENST00000437597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
LINC00884-201ENST00000437597 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
LINC00884-201ENST00000437597 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
LINC00884-201ENST00000437597 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
LINC00884-201ENST00000437597 C3P01024 1663 aa17.35■□□□□ 0.37
LINC00884-201ENST00000437597 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
LINC00884-201ENST00000437597 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.36
LINC00884-201ENST00000437597 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
LINC00884-201ENST00000437597 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.36
LINC00884-201ENST00000437597 TRAPPC8Q9Y2L5 1435 aa17.27■□□□□ 0.35
LINC00884-201ENST00000437597 CAMSAP1Q5T5Y3 1602 aa17.26■□□□□ 0.35
LINC00884-201ENST00000437597 PLCH2O75038 1416 aa17.25■□□□□ 0.35
LINC00884-201ENST00000437597 REREQ9P2R6 1566 aa17.24■□□□□ 0.35
LINC00884-201ENST00000437597 HSPA1LP34931 641 aa17.24■□□□□ 0.35
LINC00884-201ENST00000437597 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
LINC00884-201ENST00000437597 KDM5CP41229 1560 aa17.23■□□□□ 0.35
LINC00884-201ENST00000437597 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
LINC00884-201ENST00000437597 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
LINC00884-201ENST00000437597 AGLP35573 1532 aa17.18■□□□□ 0.34
LINC00884-201ENST00000437597 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
LINC00884-201ENST00000437597 MYO5CQ9NQX4 1742 aa17.16■□□□□ 0.34
LINC00884-201ENST00000437597 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
LINC00884-201ENST00000437597 NPATQ14207 1427 aa17.14■□□□□ 0.33
LINC00884-201ENST00000437597 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
LINC00884-201ENST00000437597 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
LINC00884-201ENST00000437597 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
LINC00884-201ENST00000437597 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
LINC00884-201ENST00000437597 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
LINC00884-201ENST00000437597 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
LINC00884-201ENST00000437597 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
LINC00884-201ENST00000437597 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
LINC00884-201ENST00000437597 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
LINC00884-201ENST00000437597 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
LINC00884-201ENST00000437597 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
LINC00884-201ENST00000437597 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
LINC00884-201ENST00000437597 PKD2Q13563 968 aa17.09■□□□□ 0.33
LINC00884-201ENST00000437597 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
LINC00884-201ENST00000437597 ALKQ9UM73 1620 aa17.08■□□□□ 0.32
LINC00884-201ENST00000437597 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
LINC00884-201ENST00000437597 KIF14Q15058 1648 aa17.07■□□□□ 0.32
LINC00884-201ENST00000437597 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
LINC00884-201ENST00000437597 TOM1O60784 492 aa17.05■□□□□ 0.32
LINC00884-201ENST00000437597 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
LINC00884-201ENST00000437597 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
LINC00884-201ENST00000437597 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
LINC00884-201ENST00000437597 CPS1P31327 1500 aa17.04■□□□□ 0.32
LINC00884-201ENST00000437597 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
LINC00884-201ENST00000437597 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.32
LINC00884-201ENST00000437597 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
LINC00884-201ENST00000437597 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
LINC00884-201ENST00000437597 ABCC1P33527 1531 aa16.99■□□□□ 0.31
LINC00884-201ENST00000437597 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
LINC00884-201ENST00000437597 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
LINC00884-201ENST00000437597 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
LINC00884-201ENST00000437597 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
LINC00884-201ENST00000437597 ITSN2Q9NZM3 1697 aa16.98■□□□□ 0.31
LINC00884-201ENST00000437597 PTPRKQ15262 1439 aa16.98■□□□□ 0.31
LINC00884-201ENST00000437597 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
LINC00884-201ENST00000437597 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
LINC00884-201ENST00000437597 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
LINC00884-201ENST00000437597 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
LINC00884-201ENST00000437597 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
LINC00884-201ENST00000437597 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
LINC00884-201ENST00000437597 A2ML1A8K2U0 1454 aa16.92■□□□□ 0.3
LINC00884-201ENST00000437597 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
LINC00884-201ENST00000437597 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
LINC00884-201ENST00000437597 PLXNC1O60486 1568 aa16.88■□□□□ 0.29
LINC00884-201ENST00000437597 CDK11AQ9UQ88 783 aaPredicted RBP16.87■□□□□ 0.29
LINC00884-201ENST00000437597 CLIP1P30622 1438 aa16.86■□□□□ 0.29
LINC00884-201ENST00000437597 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
LINC00884-201ENST00000437597 POTEAQ6S8J7 498 aa16.85■□□□□ 0.29
LINC00884-201ENST00000437597 SETD1AO15047 1707 aaKnown RBP16.84■□□□□ 0.29
LINC00884-201ENST00000437597 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
LINC00884-201ENST00000437597 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
LINC00884-201ENST00000437597 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
LINC00884-201ENST00000437597 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
LINC00884-201ENST00000437597 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
LINC00884-201ENST00000437597 CDC42BPAQ5VT25 1732 aa16.8■□□□□ 0.28
LINC00884-201ENST00000437597 SYNMO15061 1565 aa16.8■□□□□ 0.28
LINC00884-201ENST00000437597 INO80Q9ULG1 1556 aaPredicted RBP16.8■□□□□ 0.28
LINC00884-201ENST00000437597 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
LINC00884-201ENST00000437597 MED14O60244 1454 aa16.8■□□□□ 0.28
LINC00884-201ENST00000437597 A2MP01023 1474 aa16.8■□□□□ 0.28
LINC00884-201ENST00000437597 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
LINC00884-201ENST00000437597 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
LINC00884-201ENST00000437597 NPHP4O75161 1426 aaPredicted RBP16.78■□□□□ 0.28
LINC00884-201ENST00000437597 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
LINC00884-201ENST00000437597 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
LINC00884-201ENST00000437597 GGT6Q6P531 493 aa16.76■□□□□ 0.27
LINC00884-201ENST00000437597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms