RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
DDR1-237ENST00000437124 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
DDR1-237ENST00000437124 MLECQ14165 292 aa25.11■■□□□ 1.61
DDR1-237ENST00000437124 ATP10AO60312 1499 aa25.1■■□□□ 1.61
DDR1-237ENST00000437124 PREX1Q8TCU6 1659 aa25.08■■□□□ 1.61
DDR1-237ENST00000437124 C9orf84Q5VXU9 1444 aa25.08■■□□□ 1.61
DDR1-237ENST00000437124 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
DDR1-237ENST00000437124 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
DDR1-237ENST00000437124 DMRT2Q9Y5R5 561 aa25.04■■□□□ 1.6
DDR1-237ENST00000437124 EFCAB2Q5VUJ9 269 aa25.01■■□□□ 1.59
DDR1-237ENST00000437124 ZNF518AQ6AHZ1 1483 aa24.98■■□□□ 1.59
DDR1-237ENST00000437124 STRCQ7RTU9 1775 aa24.98■■□□□ 1.59
DDR1-237ENST00000437124 MYO5CQ9NQX4 1742 aa24.98■■□□□ 1.59
DDR1-237ENST00000437124 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
DDR1-237ENST00000437124 KDM5CP41229 1560 aa24.96■■□□□ 1.59
DDR1-237ENST00000437124 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
DDR1-237ENST00000437124 DISP3Q9P2K9 1392 aa24.95■■□□□ 1.59
DDR1-237ENST00000437124 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
DDR1-237ENST00000437124 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
DDR1-237ENST00000437124 SOCS7O14512 581 aa24.92■■□□□ 1.58
DDR1-237ENST00000437124 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
DDR1-237ENST00000437124 ILDR2Q71H61 639 aa24.92■■□□□ 1.58
DDR1-237ENST00000437124 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
DDR1-237ENST00000437124 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
DDR1-237ENST00000437124 PTPRTO14522 1441 aa24.91■■□□□ 1.58
DDR1-237ENST00000437124 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
DDR1-237ENST00000437124 KIF14Q15058 1648 aa24.88■■□□□ 1.57
DDR1-237ENST00000437124 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
DDR1-237ENST00000437124 DIP2CQ9Y2E4 1556 aa24.88■■□□□ 1.57
DDR1-237ENST00000437124 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
DDR1-237ENST00000437124 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
DDR1-237ENST00000437124 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
DDR1-237ENST00000437124 AGLP35573 1532 aa24.83■■□□□ 1.57
DDR1-237ENST00000437124 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
DDR1-237ENST00000437124 IQSEC2Q5JU85 1478 aa24.82■■□□□ 1.56
DDR1-237ENST00000437124 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
DDR1-237ENST00000437124 C3P01024 1663 aa24.81■■□□□ 1.56
DDR1-237ENST00000437124 CLIP1P30622 1438 aa24.81■■□□□ 1.56
DDR1-237ENST00000437124 TRAPPC8Q9Y2L5 1435 aa24.8■■□□□ 1.56
DDR1-237ENST00000437124 ABCA6Q8N139 1617 aa24.8■■□□□ 1.56
DDR1-237ENST00000437124 LTBP4Q8N2S1 1624 aa24.79■■□□□ 1.56
DDR1-237ENST00000437124 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
DDR1-237ENST00000437124 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
DDR1-237ENST00000437124 CNTLNQ9NXG0 1405 aa24.76■■□□□ 1.55
DDR1-237ENST00000437124 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
DDR1-237ENST00000437124 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
DDR1-237ENST00000437124 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
DDR1-237ENST00000437124 ABCC1P33527 1531 aa24.73■■□□□ 1.55
DDR1-237ENST00000437124 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
DDR1-237ENST00000437124 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
DDR1-237ENST00000437124 NPATQ14207 1427 aa24.69■■□□□ 1.54
DDR1-237ENST00000437124 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
DDR1-237ENST00000437124 KIDINS220Q9ULH0 1771 aa24.67■■□□□ 1.54
DDR1-237ENST00000437124 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
DDR1-237ENST00000437124 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
DDR1-237ENST00000437124 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
DDR1-237ENST00000437124 ZMYM3Q14202 1370 aa24.59■■□□□ 1.53
DDR1-237ENST00000437124 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
DDR1-237ENST00000437124 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
DDR1-237ENST00000437124 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
DDR1-237ENST00000437124 PLA2R1Q13018 1463 aa24.56■■□□□ 1.52
DDR1-237ENST00000437124 PKD2Q13563 968 aa24.53■■□□□ 1.52
DDR1-237ENST00000437124 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
DDR1-237ENST00000437124 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
DDR1-237ENST00000437124 NCKAP5LQ9HCH0 1330 aa24.52■■□□□ 1.52
DDR1-237ENST00000437124 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
DDR1-237ENST00000437124 SPAG9O60271 1321 aaKnown RBP24.51■■□□□ 1.51
DDR1-237ENST00000437124 PLXNC1O60486 1568 aa24.5■■□□□ 1.51
DDR1-237ENST00000437124 UBAP1LF5GYI3 381 aa24.5■■□□□ 1.51
DDR1-237ENST00000437124 SYCP2Q9BX26 1530 aa24.5■■□□□ 1.51
DDR1-237ENST00000437124 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
DDR1-237ENST00000437124 PTPRKQ15262 1439 aa24.48■■□□□ 1.51
DDR1-237ENST00000437124 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
DDR1-237ENST00000437124 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
DDR1-237ENST00000437124 CEP170BQ9Y4F5 1589 aaPredicted RBP24.48■■□□□ 1.51
DDR1-237ENST00000437124 ATP7AQ04656 1500 aa24.47■■□□□ 1.51
DDR1-237ENST00000437124 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
DDR1-237ENST00000437124 FYCO1Q9BQS8 1478 aa24.46■■□□□ 1.51
DDR1-237ENST00000437124 CLTCQ00610 1675 aaKnown RBP24.46■■□□□ 1.51
DDR1-237ENST00000437124 INO80Q9ULG1 1556 aaPredicted RBP24.46■■□□□ 1.51
DDR1-237ENST00000437124 A2MP01023 1474 aa24.45■■□□□ 1.51
DDR1-237ENST00000437124 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
DDR1-237ENST00000437124 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.5
DDR1-237ENST00000437124 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.5
DDR1-237ENST00000437124 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
DDR1-237ENST00000437124 GGT6Q6P531 493 aa24.37■■□□□ 1.49
DDR1-237ENST00000437124 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
DDR1-237ENST00000437124 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
DDR1-237ENST00000437124 ADGBQ8N7X0 1667 aa24.34■■□□□ 1.49
DDR1-237ENST00000437124 DNMT1P26358 1616 aaKnown RBP24.33■■□□□ 1.49
DDR1-237ENST00000437124 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
DDR1-237ENST00000437124 CPS1P31327 1500 aa24.31■■□□□ 1.48
DDR1-237ENST00000437124 TOM1O60784 492 aa24.28■■□□□ 1.48
DDR1-237ENST00000437124 HSPA1LP34931 641 aa24.28■■□□□ 1.48
DDR1-237ENST00000437124 MED1Q15648 1581 aaPredicted RBP24.28■■□□□ 1.48
DDR1-237ENST00000437124 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
DDR1-237ENST00000437124 NEURL4Q96JN8 1562 aa24.27■■□□□ 1.48
DDR1-237ENST00000437124 MBD5Q9P267 1494 aa24.26■■□□□ 1.47
DDR1-237ENST00000437124 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
DDR1-237ENST00000437124 POLR1AO95602 1720 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms