RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
RBFOX1-205ENST00000436368 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
RBFOX1-205ENST00000436368 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
RBFOX1-205ENST00000436368 ADGRL2O95490 1459 aa22.14■■□□□ 1.14
RBFOX1-205ENST00000436368 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.14
RBFOX1-205ENST00000436368 KIF14Q15058 1648 aa22.14■■□□□ 1.13
RBFOX1-205ENST00000436368 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
RBFOX1-205ENST00000436368 FBLN2P98095 1184 aa22.14■■□□□ 1.13
RBFOX1-205ENST00000436368 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
RBFOX1-205ENST00000436368 ABCA8O94911 1581 aa22.14■■□□□ 1.13
RBFOX1-205ENST00000436368 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
RBFOX1-205ENST00000436368 KDM5BQ9UGL1 1544 aa22.12■■□□□ 1.13
RBFOX1-205ENST00000436368 GPATCH8Q9UKJ3 1502 aaKnown RBP22.12■■□□□ 1.13
RBFOX1-205ENST00000436368 KDM6BO15054 1643 aa22.1■■□□□ 1.13
RBFOX1-205ENST00000436368 SHANK2Q9UPX8 1470 aa22.1■■□□□ 1.13
RBFOX1-205ENST00000436368 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
RBFOX1-205ENST00000436368 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
RBFOX1-205ENST00000436368 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.13
RBFOX1-205ENST00000436368 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
RBFOX1-205ENST00000436368 RPRD2Q5VT52 1461 aaKnown RBP22.08■■□□□ 1.12
RBFOX1-205ENST00000436368 ANKRD30BQ9BXX2 1392 aa22.05■■□□□ 1.12
RBFOX1-205ENST00000436368 NCOA1Q15788 1441 aa22.04■■□□□ 1.12
RBFOX1-205ENST00000436368 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
RBFOX1-205ENST00000436368 SLC4A1APQ9BWU0 796 aaKnown RBP22.01■■□□□ 1.11
RBFOX1-205ENST00000436368 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
RBFOX1-205ENST00000436368 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
RBFOX1-205ENST00000436368 ATP10BO94823 1461 aa21.99■■□□□ 1.11
RBFOX1-205ENST00000436368 PTPRGP23470 1445 aa21.98■■□□□ 1.11
RBFOX1-205ENST00000436368 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
RBFOX1-205ENST00000436368 KIAA1107Q9UPP5 1409 aa21.96■■□□□ 1.11
RBFOX1-205ENST00000436368 ARHGEF5Q12774 1597 aa21.96■■□□□ 1.11
RBFOX1-205ENST00000436368 PZPP20742 1482 aa21.96■■□□□ 1.11
RBFOX1-205ENST00000436368 HSPA5P11021 654 aaKnown RBP21.94■■□□□ 1.1
RBFOX1-205ENST00000436368 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
RBFOX1-205ENST00000436368 C9orf84Q5VXU9 1444 aa21.93■■□□□ 1.1
RBFOX1-205ENST00000436368 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
RBFOX1-205ENST00000436368 CDC42BPAQ5VT25 1732 aa21.93■■□□□ 1.1
RBFOX1-205ENST00000436368 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
RBFOX1-205ENST00000436368 ZNF777Q9ULD5 760 aaPredicted RBP21.92■■□□□ 1.1
RBFOX1-205ENST00000436368 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
RBFOX1-205ENST00000436368 KDM5DQ9BY66 1539 aa21.91■■□□□ 1.1
RBFOX1-205ENST00000436368 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
RBFOX1-205ENST00000436368 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
RBFOX1-205ENST00000436368 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
RBFOX1-205ENST00000436368 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
RBFOX1-205ENST00000436368 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
RBFOX1-205ENST00000436368 CCDC141Q6ZP82 1450 aa21.86■■□□□ 1.09
RBFOX1-205ENST00000436368 PREX2Q70Z35 1606 aa21.85■■□□□ 1.09
RBFOX1-205ENST00000436368 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
RBFOX1-205ENST00000436368 MBD5Q9P267 1494 aa21.83■■□□□ 1.09
RBFOX1-205ENST00000436368 ARHGEF12Q9NZN5 1544 aa21.83■■□□□ 1.09
RBFOX1-205ENST00000436368 NEFLP07196 543 aa21.83■■□□□ 1.09
RBFOX1-205ENST00000436368 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.08
RBFOX1-205ENST00000436368 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
RBFOX1-205ENST00000436368 FOXD1Q16676 465 aa21.82■■□□□ 1.08
RBFOX1-205ENST00000436368 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
RBFOX1-205ENST00000436368 CHD1O14646 1710 aa21.82■■□□□ 1.08
RBFOX1-205ENST00000436368 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
RBFOX1-205ENST00000436368 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
RBFOX1-205ENST00000436368 PKD2Q13563 968 aa21.79■■□□□ 1.08
RBFOX1-205ENST00000436368 MAST1Q9Y2H9 1570 aa21.79■■□□□ 1.08
RBFOX1-205ENST00000436368 NUP155O75694 1391 aa21.78■■□□□ 1.08
RBFOX1-205ENST00000436368 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
RBFOX1-205ENST00000436368 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
RBFOX1-205ENST00000436368 SPATA31E1Q6ZUB1 1445 aa21.76■■□□□ 1.07
RBFOX1-205ENST00000436368 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
RBFOX1-205ENST00000436368 SAMD9LQ8IVG5 1584 aa21.75■■□□□ 1.07
RBFOX1-205ENST00000436368 NBPF8Q3BBV2 869 aa21.73■■□□□ 1.07
RBFOX1-205ENST00000436368 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
RBFOX1-205ENST00000436368 RALGAPBQ86X10 1494 aa21.72■■□□□ 1.07
RBFOX1-205ENST00000436368 UHRF1BP1LA0JNW5 1464 aa21.7■■□□□ 1.06
RBFOX1-205ENST00000436368 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
RBFOX1-205ENST00000436368 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
RBFOX1-205ENST00000436368 CDC42BPBQ9Y5S2 1711 aa21.68■■□□□ 1.06
RBFOX1-205ENST00000436368 USP47Q96K76 1375 aa21.68■■□□□ 1.06
RBFOX1-205ENST00000436368 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
RBFOX1-205ENST00000436368 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.06
RBFOX1-205ENST00000436368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
RBFOX1-205ENST00000436368 UNC13BO14795 1591 aa21.66■■□□□ 1.06
RBFOX1-205ENST00000436368 KIF7Q2M1P5 1343 aa21.66■■□□□ 1.06
RBFOX1-205ENST00000436368 SYCP2Q9BX26 1530 aa21.66■■□□□ 1.06
RBFOX1-205ENST00000436368 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
RBFOX1-205ENST00000436368 TTC37Q6PGP7 1564 aa21.64■■□□□ 1.06
RBFOX1-205ENST00000436368 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
RBFOX1-205ENST00000436368 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
RBFOX1-205ENST00000436368 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
RBFOX1-205ENST00000436368 KDM5CP41229 1560 aa21.62■■□□□ 1.05
RBFOX1-205ENST00000436368 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
RBFOX1-205ENST00000436368 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
RBFOX1-205ENST00000436368 FKBP8Q14318 412 aa21.6■■□□□ 1.05
RBFOX1-205ENST00000436368 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
RBFOX1-205ENST00000436368 CCDC144AA2RUR9 1427 aa21.59■■□□□ 1.05
RBFOX1-205ENST00000436368 PLCH2O75038 1416 aa21.58■■□□□ 1.05
RBFOX1-205ENST00000436368 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
RBFOX1-205ENST00000436368 IQGAP3Q86VI3 1631 aa21.56■■□□□ 1.04
RBFOX1-205ENST00000436368 MYT1Q01538 1121 aa21.55■■□□□ 1.04
RBFOX1-205ENST00000436368 ZNF326Q5BKZ1 582 aaKnown RBP21.55■■□□□ 1.04
RBFOX1-205ENST00000436368 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
RBFOX1-205ENST00000436368 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
RBFOX1-205ENST00000436368 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms