RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CHIC2Q9UKJ5 165 aa26.5■■□□□ 1.83
CLK1-205ENST00000434813 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
CLK1-205ENST00000434813 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
CLK1-205ENST00000434813 PTPRGP23470 1445 aa26.47■■□□□ 1.83
CLK1-205ENST00000434813 TROQ12816 1431 aaPredicted RBP26.47■■□□□ 1.83
CLK1-205ENST00000434813 ITSN2Q9NZM3 1697 aa26.46■■□□□ 1.83
CLK1-205ENST00000434813 ABCC5O15440 1437 aa26.44■■□□□ 1.82
CLK1-205ENST00000434813 ABCA8O94911 1581 aa26.44■■□□□ 1.82
CLK1-205ENST00000434813 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
CLK1-205ENST00000434813 CLASP1Q7Z460 1538 aa26.38■■□□□ 1.81
CLK1-205ENST00000434813 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
CLK1-205ENST00000434813 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
CLK1-205ENST00000434813 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
CLK1-205ENST00000434813 KIF14Q15058 1648 aa26.36■■□□□ 1.81
CLK1-205ENST00000434813 MPHOSPH9Q99550 1183 aa26.35■■□□□ 1.81
CLK1-205ENST00000434813 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
CLK1-205ENST00000434813 GPATCH8Q9UKJ3 1502 aaKnown RBP26.33■■□□□ 1.81
CLK1-205ENST00000434813 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.8
CLK1-205ENST00000434813 PLEKHD1A6NEE1 506 aa26.32■■□□□ 1.8
CLK1-205ENST00000434813 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
CLK1-205ENST00000434813 ATP10BO94823 1461 aa26.32■■□□□ 1.8
CLK1-205ENST00000434813 ZNF644Q9H582 1327 aaPredicted RBP26.32■■□□□ 1.8
CLK1-205ENST00000434813 KCNH8Q96L42 1107 aa26.29■■□□□ 1.8
CLK1-205ENST00000434813 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
CLK1-205ENST00000434813 ADGRL2O95490 1459 aa26.28■■□□□ 1.8
CLK1-205ENST00000434813 RPRD2Q5VT52 1461 aaKnown RBP26.25■■□□□ 1.79
CLK1-205ENST00000434813 ANKRD30BQ9BXX2 1392 aa26.25■■□□□ 1.79
CLK1-205ENST00000434813 CCER2I3L3R5 266 aa26.25■■□□□ 1.79
CLK1-205ENST00000434813 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
CLK1-205ENST00000434813 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
CLK1-205ENST00000434813 ANP32CO43423 234 aa26.22■■□□□ 1.79
CLK1-205ENST00000434813 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
CLK1-205ENST00000434813 TEX14Q8IWB6 1497 aa26.21■■□□□ 1.79
CLK1-205ENST00000434813 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
CLK1-205ENST00000434813 PZPP20742 1482 aa26.19■■□□□ 1.78
CLK1-205ENST00000434813 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
CLK1-205ENST00000434813 SHANK2Q9UPX8 1470 aa26.16■■□□□ 1.78
CLK1-205ENST00000434813 L3MBTL2Q969R5 705 aa26.15■■□□□ 1.78
CLK1-205ENST00000434813 FOXD1Q16676 465 aa26.15■■□□□ 1.78
CLK1-205ENST00000434813 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
CLK1-205ENST00000434813 HSPA5P11021 654 aaKnown RBP26.12■■□□□ 1.77
CLK1-205ENST00000434813 ANKRD30AQ9BXX3 1397 aa26.12■■□□□ 1.77
CLK1-205ENST00000434813 SUPT16HQ9Y5B9 1047 aaKnown RBP26.12■■□□□ 1.77
CLK1-205ENST00000434813 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
CLK1-205ENST00000434813 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
CLK1-205ENST00000434813 RIMBP3CA6NJZ7 1639 aa26.08■■□□□ 1.77
CLK1-205ENST00000434813 RIMBP3BA6NNM3 1639 aa26.08■■□□□ 1.77
CLK1-205ENST00000434813 RIMBP3Q9UFD9 1639 aa26.08■■□□□ 1.77
CLK1-205ENST00000434813 UHRF1BP1LA0JNW5 1464 aa26.08■■□□□ 1.77
CLK1-205ENST00000434813 WASHC2AQ641Q2 1341 aa26.08■■□□□ 1.76
CLK1-205ENST00000434813 KIAA1107Q9UPP5 1409 aa26.06■■□□□ 1.76
CLK1-205ENST00000434813 ARHGEF5Q12774 1597 aa26.05■■□□□ 1.76
CLK1-205ENST00000434813 ANKRD50Q9ULJ7 1429 aa26.04■■□□□ 1.76
CLK1-205ENST00000434813 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
CLK1-205ENST00000434813 MBD5Q9P267 1494 aa26.02■■□□□ 1.76
CLK1-205ENST00000434813 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
CLK1-205ENST00000434813 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
CLK1-205ENST00000434813 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
CLK1-205ENST00000434813 PREX2Q70Z35 1606 aa26■■□□□ 1.75
CLK1-205ENST00000434813 CNTLNQ9NXG0 1405 aa26■■□□□ 1.75
CLK1-205ENST00000434813 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
CLK1-205ENST00000434813 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
CLK1-205ENST00000434813 SPATA31E1Q6ZUB1 1445 aa25.97■■□□□ 1.75
CLK1-205ENST00000434813 CCDC7Q96M83 1385 aa25.95■■□□□ 1.74
CLK1-205ENST00000434813 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
CLK1-205ENST00000434813 SAMD9LQ8IVG5 1584 aa25.94■■□□□ 1.74
CLK1-205ENST00000434813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.92■■□□□ 1.74
CLK1-205ENST00000434813 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
CLK1-205ENST00000434813 PKD2Q13563 968 aa25.9■■□□□ 1.74
CLK1-205ENST00000434813 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
CLK1-205ENST00000434813 KIF15Q9NS87 1388 aa25.89■■□□□ 1.73
CLK1-205ENST00000434813 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
CLK1-205ENST00000434813 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
CLK1-205ENST00000434813 C11orf95C9JLR9 678 aaPredicted RBP25.87■■□□□ 1.73
CLK1-205ENST00000434813 NUP155O75694 1391 aa25.86■■□□□ 1.73
CLK1-205ENST00000434813 ARHGAP5Q13017 1502 aa25.86■■□□□ 1.73
CLK1-205ENST00000434813 ARHGEF12Q9NZN5 1544 aa25.86■■□□□ 1.73
CLK1-205ENST00000434813 MAST1Q9Y2H9 1570 aa25.84■■□□□ 1.73
CLK1-205ENST00000434813 MYO5CQ9NQX4 1742 aa25.83■■□□□ 1.73
CLK1-205ENST00000434813 HNRNPMP52272 730 aaKnown RBP eCLIP25.83■■□□□ 1.731e-7■■■■□ 21.9
CLK1-205ENST00000434813 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
CLK1-205ENST00000434813 RSPH4AQ5TD94 716 aa25.81■■□□□ 1.72
CLK1-205ENST00000434813 KIF7Q2M1P5 1343 aa25.8■■□□□ 1.72
CLK1-205ENST00000434813 KDM5CP41229 1560 aa25.8■■□□□ 1.72
CLK1-205ENST00000434813 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
CLK1-205ENST00000434813 WDR7Q9Y4E6 1490 aa25.79■■□□□ 1.72
CLK1-205ENST00000434813 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
CLK1-205ENST00000434813 PLCH2O75038 1416 aa25.77■■□□□ 1.72
CLK1-205ENST00000434813 PLEKHH2Q8IVE3 1493 aa25.77■■□□□ 1.72
CLK1-205ENST00000434813 USP47Q96K76 1375 aa25.76■■□□□ 1.71
CLK1-205ENST00000434813 FAM135AQ9P2D6 1515 aa25.76■■□□□ 1.71
CLK1-205ENST00000434813 UNC13BO14795 1591 aa25.76■■□□□ 1.71
CLK1-205ENST00000434813 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
CLK1-205ENST00000434813 PRKRIP1Q9H875 184 aaPredicted RBP25.75■■□□□ 1.71
CLK1-205ENST00000434813 PLXNC1O60486 1568 aa25.75■■□□□ 1.71
CLK1-205ENST00000434813 BCORL1Q5H9F3 1711 aa25.74■■□□□ 1.71
CLK1-205ENST00000434813 EFCAB2Q5VUJ9 269 aa25.73■■□□□ 1.71
CLK1-205ENST00000434813 FKBP8Q14318 412 aa25.72■■□□□ 1.71
CLK1-205ENST00000434813 NEFLP07196 543 aa25.7■■□□□ 1.7
CLK1-205ENST00000434813 HNRNPUQ00839 825 aaKnown RBP eCLIP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms