RNA–Protein interactions for RNA: ENST00000434521.1

PRDM6-203, Transcript of PR/SET domain 6, humanhuman

TSL 2

Gene PRDM6, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-203ENST00000434521 ILDR2Q71H61 639 aa25.81■■□□□ 1.72
PRDM6-203ENST00000434521 ARHGEF12Q9NZN5 1544 aa25.81■■□□□ 1.72
PRDM6-203ENST00000434521 ATP10AO60312 1499 aa25.79■■□□□ 1.72
PRDM6-203ENST00000434521 CEBPAP49715 358 aaPredicted RBP25.77■■□□□ 1.72
PRDM6-203ENST00000434521 DISP3Q9P2K9 1392 aa25.77■■□□□ 1.72
PRDM6-203ENST00000434521 FER1L4A9Z1Z3 1794 aa25.77■■□□□ 1.72
PRDM6-203ENST00000434521 SOCS7O14512 581 aa25.76■■□□□ 1.71
PRDM6-203ENST00000434521 C9orf84Q5VXU9 1444 aa25.76■■□□□ 1.71
PRDM6-203ENST00000434521 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
PRDM6-203ENST00000434521 CDK13Q14004 1512 aaKnown RBP25.72■■□□□ 1.71
PRDM6-203ENST00000434521 EEA1Q15075 1411 aa25.71■■□□□ 1.71
PRDM6-203ENST00000434521 EFCAB2Q5VUJ9 269 aa25.71■■□□□ 1.71
PRDM6-203ENST00000434521 PREX1Q8TCU6 1659 aa25.69■■□□□ 1.7
PRDM6-203ENST00000434521 UHRF1BP1Q6BDS2 1440 aa25.66■■□□□ 1.7
PRDM6-203ENST00000434521 STRCQ7RTU9 1775 aa25.64■■□□□ 1.7
PRDM6-203ENST00000434521 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
PRDM6-203ENST00000434521 PTPRTO14522 1441 aa25.62■■□□□ 1.69
PRDM6-203ENST00000434521 ZNF518AQ6AHZ1 1483 aa25.61■■□□□ 1.69
PRDM6-203ENST00000434521 SETD1BQ9UPS6 1966 aaKnown RBP25.58■■□□□ 1.69
PRDM6-203ENST00000434521 KDM5CP41229 1560 aa25.57■■□□□ 1.68
PRDM6-203ENST00000434521 CDK11AQ9UQ88 783 aaPredicted RBP25.57■■□□□ 1.68
PRDM6-203ENST00000434521 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
PRDM6-203ENST00000434521 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
PRDM6-203ENST00000434521 FMN1Q68DA7 1419 aa25.53■■□□□ 1.68
PRDM6-203ENST00000434521 TROQ12816 1431 aaPredicted RBP25.52■■□□□ 1.68
PRDM6-203ENST00000434521 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
PRDM6-203ENST00000434521 LTBP4Q8N2S1 1624 aa25.52■■□□□ 1.68
PRDM6-203ENST00000434521 MYO5CQ9NQX4 1742 aa25.51■■□□□ 1.68
PRDM6-203ENST00000434521 MLH3Q9UHC1 1453 aa25.51■■□□□ 1.67
PRDM6-203ENST00000434521 KIF14Q15058 1648 aa25.5■■□□□ 1.67
PRDM6-203ENST00000434521 SPATA31D1Q6ZQQ2 1576 aa25.5■■□□□ 1.67
PRDM6-203ENST00000434521 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
PRDM6-203ENST00000434521 ARHGAP5Q13017 1502 aa25.49■■□□□ 1.67
PRDM6-203ENST00000434521 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
PRDM6-203ENST00000434521 AGLP35573 1532 aa25.47■■□□□ 1.67
PRDM6-203ENST00000434521 IQSEC2Q5JU85 1478 aa25.47■■□□□ 1.67
PRDM6-203ENST00000434521 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
PRDM6-203ENST00000434521 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.66
PRDM6-203ENST00000434521 ESF1Q9H501 851 aaKnown RBP25.44■■□□□ 1.66
PRDM6-203ENST00000434521 C3P01024 1663 aa25.44■■□□□ 1.66
PRDM6-203ENST00000434521 ABCA6Q8N139 1617 aa25.43■■□□□ 1.66
PRDM6-203ENST00000434521 CLIP1P30622 1438 aa25.42■■□□□ 1.66
PRDM6-203ENST00000434521 CNTLNQ9NXG0 1405 aa25.4■■□□□ 1.66
PRDM6-203ENST00000434521 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
PRDM6-203ENST00000434521 ABCC1P33527 1531 aa25.36■■□□□ 1.65
PRDM6-203ENST00000434521 NPATQ14207 1427 aa25.35■■□□□ 1.65
PRDM6-203ENST00000434521 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
PRDM6-203ENST00000434521 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
PRDM6-203ENST00000434521 CAMSAP1Q5T5Y3 1602 aa25.3■■□□□ 1.64
PRDM6-203ENST00000434521 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
PRDM6-203ENST00000434521 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
PRDM6-203ENST00000434521 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
PRDM6-203ENST00000434521 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
PRDM6-203ENST00000434521 PREX2Q70Z35 1606 aa25.27■■□□□ 1.64
PRDM6-203ENST00000434521 UBAP1LF5GYI3 381 aa25.27■■□□□ 1.64
PRDM6-203ENST00000434521 ITSN2Q9NZM3 1697 aa25.25■■□□□ 1.63
PRDM6-203ENST00000434521 PKD2Q13563 968 aa25.24■■□□□ 1.63
PRDM6-203ENST00000434521 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
PRDM6-203ENST00000434521 PLA2R1Q13018 1463 aa25.21■■□□□ 1.63
PRDM6-203ENST00000434521 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
PRDM6-203ENST00000434521 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.63
PRDM6-203ENST00000434521 MROH2AA6NES4 1674 aa25.2■■□□□ 1.63
PRDM6-203ENST00000434521 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.62
PRDM6-203ENST00000434521 SPAG9O60271 1321 aaKnown RBP25.19■■□□□ 1.62
PRDM6-203ENST00000434521 TCOF1Q13428 1488 aaKnown RBP25.19■■□□□ 1.62
PRDM6-203ENST00000434521 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
PRDM6-203ENST00000434521 ZNF777Q9ULD5 760 aaPredicted RBP25.16■■□□□ 1.62
PRDM6-203ENST00000434521 HNRNPMP52272 730 aaKnown RBP eCLIP25.14■■□□□ 1.62
PRDM6-203ENST00000434521 GPATCH8Q9UKJ3 1502 aaKnown RBP25.12■■□□□ 1.61
PRDM6-203ENST00000434521 CDC42BPAQ5VT25 1732 aa25.12■■□□□ 1.61
PRDM6-203ENST00000434521 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
PRDM6-203ENST00000434521 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
PRDM6-203ENST00000434521 KIAA1107Q9UPP5 1409 aa25.12■■□□□ 1.61
PRDM6-203ENST00000434521 CEP170BQ9Y4F5 1589 aaPredicted RBP25.11■■□□□ 1.61
PRDM6-203ENST00000434521 ZNF142P52746 1687 aaPredicted RBP25.1■■□□□ 1.61
PRDM6-203ENST00000434521 PLXNC1O60486 1568 aa25.1■■□□□ 1.61
PRDM6-203ENST00000434521 A2MP01023 1474 aa25.1■■□□□ 1.61
PRDM6-203ENST00000434521 MYO3AQ8NEV4 1616 aa25.09■■□□□ 1.61
PRDM6-203ENST00000434521 GGT6Q6P531 493 aa25.08■■□□□ 1.61
PRDM6-203ENST00000434521 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
PRDM6-203ENST00000434521 HSPA1LP34931 641 aa25.07■■□□□ 1.6
PRDM6-203ENST00000434521 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
PRDM6-203ENST00000434521 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
PRDM6-203ENST00000434521 PLEKHH2Q8IVE3 1493 aa25.04■■□□□ 1.6
PRDM6-203ENST00000434521 CFDP1Q9UEE9 299 aaPredicted RBP25.03■■□□□ 1.6
PRDM6-203ENST00000434521 A2ML1A8K2U0 1454 aa25.02■■□□□ 1.6
PRDM6-203ENST00000434521 INO80Q9ULG1 1556 aaPredicted RBP25.02■■□□□ 1.6
PRDM6-203ENST00000434521 FYCO1Q9BQS8 1478 aa25.02■■□□□ 1.6
PRDM6-203ENST00000434521 TOM1O60784 492 aa24.99■■□□□ 1.59
PRDM6-203ENST00000434521 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
PRDM6-203ENST00000434521 PIP4K2BP78356 416 aa24.98■■□□□ 1.59
PRDM6-203ENST00000434521 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
PRDM6-203ENST00000434521 CPS1P31327 1500 aa24.96■■□□□ 1.59
PRDM6-203ENST00000434521 DNMT1P26358 1616 aaKnown RBP24.96■■□□□ 1.59
PRDM6-203ENST00000434521 CCNB3Q8WWL7 1395 aa24.95■■□□□ 1.59
PRDM6-203ENST00000434521 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
PRDM6-203ENST00000434521 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
PRDM6-203ENST00000434521 NEURL4Q96JN8 1562 aa24.92■■□□□ 1.58
PRDM6-203ENST00000434521 TNRQ92752 1358 aa24.92■■□□□ 1.58
PRDM6-203ENST00000434521 FBXO31Q5XUX0 539 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms