RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
SCRN1-207ENST00000434476 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
SCRN1-207ENST00000434476 TRIM52Q96A61 297 aa18.86■□□□□ 0.61
SCRN1-207ENST00000434476 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
SCRN1-207ENST00000434476 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
SCRN1-207ENST00000434476 ATP10BO94823 1461 aa18.84■□□□□ 0.61
SCRN1-207ENST00000434476 PTPRGP23470 1445 aa18.83■□□□□ 0.61
SCRN1-207ENST00000434476 CAMSAP2Q08AD1 1489 aa18.82■□□□□ 0.6
SCRN1-207ENST00000434476 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
SCRN1-207ENST00000434476 DENND4BO75064 1496 aaPredicted RBP18.81■□□□□ 0.6
SCRN1-207ENST00000434476 KDM6BO15054 1643 aa18.81■□□□□ 0.6
SCRN1-207ENST00000434476 KIF14Q15058 1648 aa18.79■□□□□ 0.6
SCRN1-207ENST00000434476 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
SCRN1-207ENST00000434476 ABCC10Q5T3U5 1492 aa18.78■□□□□ 0.6
SCRN1-207ENST00000434476 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
SCRN1-207ENST00000434476 NCOA1Q15788 1441 aa18.78■□□□□ 0.6
SCRN1-207ENST00000434476 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
SCRN1-207ENST00000434476 ANKRD30AQ9BXX3 1397 aa18.74■□□□□ 0.59
SCRN1-207ENST00000434476 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
SCRN1-207ENST00000434476 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
SCRN1-207ENST00000434476 CHD1O14646 1710 aa18.73■□□□□ 0.59
SCRN1-207ENST00000434476 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
SCRN1-207ENST00000434476 ZNF777Q9ULD5 760 aaPredicted RBP18.72■□□□□ 0.59
SCRN1-207ENST00000434476 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
SCRN1-207ENST00000434476 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
SCRN1-207ENST00000434476 CROCC2H7BZ55 1655 aa18.7■□□□□ 0.58
SCRN1-207ENST00000434476 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
SCRN1-207ENST00000434476 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
SCRN1-207ENST00000434476 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
SCRN1-207ENST00000434476 RSPH4AQ5TD94 716 aa18.67■□□□□ 0.58
SCRN1-207ENST00000434476 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
SCRN1-207ENST00000434476 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
SCRN1-207ENST00000434476 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
SCRN1-207ENST00000434476 PZPP20742 1482 aa18.65■□□□□ 0.58
SCRN1-207ENST00000434476 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.57
SCRN1-207ENST00000434476 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
SCRN1-207ENST00000434476 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
SCRN1-207ENST00000434476 FOXD1Q16676 465 aa18.63■□□□□ 0.57
SCRN1-207ENST00000434476 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
SCRN1-207ENST00000434476 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
SCRN1-207ENST00000434476 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
SCRN1-207ENST00000434476 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
SCRN1-207ENST00000434476 MBD5Q9P267 1494 aa18.6■□□□□ 0.57
SCRN1-207ENST00000434476 ANP32CO43423 234 aa18.59■□□□□ 0.57
SCRN1-207ENST00000434476 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
SCRN1-207ENST00000434476 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
SCRN1-207ENST00000434476 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.56
SCRN1-207ENST00000434476 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
SCRN1-207ENST00000434476 PREX2Q70Z35 1606 aa18.57■□□□□ 0.56
SCRN1-207ENST00000434476 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
SCRN1-207ENST00000434476 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCRN1-207ENST00000434476 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
SCRN1-207ENST00000434476 KDM5DQ9BY66 1539 aa18.55■□□□□ 0.56
SCRN1-207ENST00000434476 PKD2Q13563 968 aa18.54■□□□□ 0.56
SCRN1-207ENST00000434476 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
SCRN1-207ENST00000434476 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
SCRN1-207ENST00000434476 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
SCRN1-207ENST00000434476 SAMD9LQ8IVG5 1584 aa18.53■□□□□ 0.56
SCRN1-207ENST00000434476 NUP155O75694 1391 aa18.52■□□□□ 0.56
SCRN1-207ENST00000434476 CDC42BPBQ9Y5S2 1711 aa18.52■□□□□ 0.56
SCRN1-207ENST00000434476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCRN1-207ENST00000434476 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
SCRN1-207ENST00000434476 MAST1Q9Y2H9 1570 aa18.5■□□□□ 0.55
SCRN1-207ENST00000434476 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
SCRN1-207ENST00000434476 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
SCRN1-207ENST00000434476 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
SCRN1-207ENST00000434476 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
SCRN1-207ENST00000434476 PLCH2O75038 1416 aa18.45■□□□□ 0.54
SCRN1-207ENST00000434476 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
SCRN1-207ENST00000434476 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
SCRN1-207ENST00000434476 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
SCRN1-207ENST00000434476 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
SCRN1-207ENST00000434476 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
SCRN1-207ENST00000434476 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
SCRN1-207ENST00000434476 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
SCRN1-207ENST00000434476 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
SCRN1-207ENST00000434476 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
SCRN1-207ENST00000434476 CNTLNQ9NXG0 1405 aa18.39■□□□□ 0.53
SCRN1-207ENST00000434476 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
SCRN1-207ENST00000434476 ARAP3Q8WWN8 1544 aa18.37■□□□□ 0.53
SCRN1-207ENST00000434476 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
SCRN1-207ENST00000434476 UNC13BO14795 1591 aa18.36■□□□□ 0.53
SCRN1-207ENST00000434476 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
SCRN1-207ENST00000434476 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
SCRN1-207ENST00000434476 DUOX2Q9NRD8 1548 aa18.36■□□□□ 0.53
SCRN1-207ENST00000434476 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
SCRN1-207ENST00000434476 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
SCRN1-207ENST00000434476 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
SCRN1-207ENST00000434476 USP47Q96K76 1375 aa18.31■□□□□ 0.52
SCRN1-207ENST00000434476 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
SCRN1-207ENST00000434476 ABCC1P33527 1531 aa18.31■□□□□ 0.52
SCRN1-207ENST00000434476 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
SCRN1-207ENST00000434476 IQGAP3Q86VI3 1631 aa18.29■□□□□ 0.52
SCRN1-207ENST00000434476 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
SCRN1-207ENST00000434476 WDR7Q9Y4E6 1490 aa18.28■□□□□ 0.52
SCRN1-207ENST00000434476 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
SCRN1-207ENST00000434476 ATP10AO60312 1499 aa18.27■□□□□ 0.52
SCRN1-207ENST00000434476 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SCRN1-207ENST00000434476 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
SCRN1-207ENST00000434476 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms