RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.12
CCDC171-202ENST00000432954 KIF20AO95235 890 aa14.32□□□□□ -0.12
CCDC171-202ENST00000432954 PSEN1P49768 467 aa14.32□□□□□ -0.12
CCDC171-202ENST00000432954 TAF3Q5VWG9 929 aa14.32□□□□□ -0.12
CCDC171-202ENST00000432954 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
CCDC171-202ENST00000432954 PTMSP20962 102 aa14.31□□□□□ -0.12
CCDC171-202ENST00000432954 SLC52A1Q9NWF4 448 aa14.31□□□□□ -0.12
CCDC171-202ENST00000432954 PHF14O94880 888 aa14.3□□□□□ -0.12
CCDC171-202ENST00000432954 FAM43BQ6ZT52 329 aaPredicted RBP14.3□□□□□ -0.12
CCDC171-202ENST00000432954 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
CCDC171-202ENST00000432954 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.12
CCDC171-202ENST00000432954 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.13
CCDC171-202ENST00000432954 SLC20A2Q08357 652 aa14.27□□□□□ -0.13
CCDC171-202ENST00000432954 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
CCDC171-202ENST00000432954 EEA1Q15075 1411 aa14.24□□□□□ -0.13
CCDC171-202ENST00000432954 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
CCDC171-202ENST00000432954 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
CCDC171-202ENST00000432954 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
CCDC171-202ENST00000432954 MTERF4Q7Z6M4 381 aaKnown RBP14.22□□□□□ -0.13
CCDC171-202ENST00000432954 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
CCDC171-202ENST00000432954 APPP05067 770 aa14.21□□□□□ -0.13
CCDC171-202ENST00000432954 GTPBP4Q9BZE4 634 aaKnown RBP14.2□□□□□ -0.14
CCDC171-202ENST00000432954 LETM1O95202 739 aaPredicted RBP14.2□□□□□ -0.14
CCDC171-202ENST00000432954 SETQ01105 290 aaPredicted RBP14.2□□□□□ -0.14
CCDC171-202ENST00000432954 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
CCDC171-202ENST00000432954 PSMD1Q99460 953 aa14.19□□□□□ -0.14
CCDC171-202ENST00000432954 TERF1P54274 439 aa14.19□□□□□ -0.14
CCDC171-202ENST00000432954 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC171-202ENST00000432954 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
CCDC171-202ENST00000432954 YY1AP1Q9H869 796 aa14.17□□□□□ -0.14
CCDC171-202ENST00000432954 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
CCDC171-202ENST00000432954 CEP120Q8N960 986 aa14.16□□□□□ -0.14
CCDC171-202ENST00000432954 SOX12O15370 315 aa14.15□□□□□ -0.15
CCDC171-202ENST00000432954 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
CCDC171-202ENST00000432954 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CCDC171-202ENST00000432954 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
CCDC171-202ENST00000432954 CCER2I3L3R5 266 aa14.13□□□□□ -0.15
CCDC171-202ENST00000432954 GEMIN8Q9NWZ8 242 aaKnown RBP14.13□□□□□ -0.15
CCDC171-202ENST00000432954 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
CCDC171-202ENST00000432954 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
CCDC171-202ENST00000432954 RALBP1Q15311 655 aa14.11□□□□□ -0.15
CCDC171-202ENST00000432954 NBPF20Q3BBV1 942 aa14.1□□□□□ -0.15
CCDC171-202ENST00000432954 DNAJC2Q99543 621 aaKnown RBP14.1□□□□□ -0.15
CCDC171-202ENST00000432954 EGFL6Q8IUX8 553 aa14.09□□□□□ -0.15
CCDC171-202ENST00000432954 NACADO15069 1562 aa14.08□□□□□ -0.16
CCDC171-202ENST00000432954 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
CCDC171-202ENST00000432954 PRDM16Q9HAZ2 1276 aa14.07□□□□□ -0.16
CCDC171-202ENST00000432954 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
CCDC171-202ENST00000432954 E9PSI1 815 aa14.06□□□□□ -0.16
CCDC171-202ENST00000432954 RIPK4P57078 832 aa14.05□□□□□ -0.16
CCDC171-202ENST00000432954 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
CCDC171-202ENST00000432954 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
CCDC171-202ENST00000432954 OS9Q13438 667 aaPredicted RBP14.03□□□□□ -0.16
CCDC171-202ENST00000432954 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
CCDC171-202ENST00000432954 TRIM52Q96A61 297 aa14.02□□□□□ -0.16
CCDC171-202ENST00000432954 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
CCDC171-202ENST00000432954 ESPNB1AK53 854 aa14.01□□□□□ -0.17
CCDC171-202ENST00000432954 CCDC94Q9BW85 323 aaPredicted RBP14□□□□□ -0.17
CCDC171-202ENST00000432954 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
CCDC171-202ENST00000432954 ANAPC15P60006 121 aa14□□□□□ -0.17
CCDC171-202ENST00000432954 IRX5P78411 483 aaPredicted RBP14□□□□□ -0.17
CCDC171-202ENST00000432954 MAFGO15525 162 aa13.99□□□□□ -0.17
CCDC171-202ENST00000432954 GPATCH11Q8N954 259 aa13.99□□□□□ -0.17
CCDC171-202ENST00000432954 SH3BP1Q9Y3L3 701 aa13.99□□□□□ -0.17
CCDC171-202ENST00000432954 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
CCDC171-202ENST00000432954 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
CCDC171-202ENST00000432954 ABCC9O60706 1549 aa13.98□□□□□ -0.17
CCDC171-202ENST00000432954 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
CCDC171-202ENST00000432954 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.17
CCDC171-202ENST00000432954 NBPF1Q3BBV0 1214 aa13.96□□□□□ -0.18
CCDC171-202ENST00000432954 ZBTB22O15209 634 aa13.95□□□□□ -0.18
CCDC171-202ENST00000432954 TTC36A6NLP5 189 aa13.94□□□□□ -0.18
CCDC171-202ENST00000432954 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
CCDC171-202ENST00000432954 FAM13BQ9NYF5 915 aa13.93□□□□□ -0.18
CCDC171-202ENST00000432954 OFD1O75665 1012 aa13.93□□□□□ -0.18
CCDC171-202ENST00000432954 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
CCDC171-202ENST00000432954 FSD2A1L4K1 749 aa13.92□□□□□ -0.18
CCDC171-202ENST00000432954 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
CCDC171-202ENST00000432954 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCDC171-202ENST00000432954 IRF6O14896 467 aa13.91□□□□□ -0.18
CCDC171-202ENST00000432954 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.91□□□□□ -0.18
CCDC171-202ENST00000432954 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
CCDC171-202ENST00000432954 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
CCDC171-202ENST00000432954 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
CCDC171-202ENST00000432954 SEMA3FQ13275 785 aa13.89□□□□□ -0.19
CCDC171-202ENST00000432954 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
CCDC171-202ENST00000432954 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
CCDC171-202ENST00000432954 ZBED9Q6R2W3 1325 aa13.88□□□□□ -0.19
CCDC171-202ENST00000432954 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
CCDC171-202ENST00000432954 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
CCDC171-202ENST00000432954 MS4A1P11836 297 aa13.87□□□□□ -0.19
CCDC171-202ENST00000432954 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
CCDC171-202ENST00000432954 EFCC1Q9HA90 598 aa13.87□□□□□ -0.19
CCDC171-202ENST00000432954 SATB1Q01826 763 aa13.86□□□□□ -0.19
CCDC171-202ENST00000432954 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
CCDC171-202ENST00000432954 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
CCDC171-202ENST00000432954 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
CCDC171-202ENST00000432954 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
CCDC171-202ENST00000432954 TMC1Q8TDI8 760 aa13.85□□□□□ -0.19
CCDC171-202ENST00000432954 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms