RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 ARHGEF12Q9NZN5 1544 aa26.98■■□□□ 1.91
NUP50-209ENST00000432340 ATP10AO60312 1499 aa26.98■■□□□ 1.91
NUP50-209ENST00000432340 C9orf84Q5VXU9 1444 aa26.98■■□□□ 1.91
NUP50-209ENST00000432340 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
NUP50-209ENST00000432340 NUP153P49790 1475 aaKnown RBP26.97■■□□□ 1.91
NUP50-209ENST00000432340 CEBPAP49715 358 aaPredicted RBP26.96■■□□□ 1.91
NUP50-209ENST00000432340 SCAPERQ9BY12 1400 aa26.93■■□□□ 1.9
NUP50-209ENST00000432340 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
NUP50-209ENST00000432340 ESF1Q9H501 851 aaKnown RBP26.89■■□□□ 1.9
NUP50-209ENST00000432340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.89
NUP50-209ENST00000432340 SAMD9Q5K651 1589 aa26.88■■□□□ 1.89
NUP50-209ENST00000432340 EFCAB2Q5VUJ9 269 aa26.85■■□□□ 1.89
NUP50-209ENST00000432340 STRCQ7RTU9 1775 aa26.84■■□□□ 1.89
NUP50-209ENST00000432340 PLCH2O75038 1416 aa26.84■■□□□ 1.89
NUP50-209ENST00000432340 SIGLEC1Q9BZZ2 1709 aa26.82■■□□□ 1.88
NUP50-209ENST00000432340 LTBP4Q8N2S1 1624 aa26.81■■□□□ 1.88
NUP50-209ENST00000432340 UBAP1LF5GYI3 381 aa26.79■■□□□ 1.88
NUP50-209ENST00000432340 MYT1LQ9UL68 1186 aa26.79■■□□□ 1.88
NUP50-209ENST00000432340 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
NUP50-209ENST00000432340 TRAPPC8Q9Y2L5 1435 aa26.78■■□□□ 1.88
NUP50-209ENST00000432340 ZNF518AQ6AHZ1 1483 aa26.75■■□□□ 1.87
NUP50-209ENST00000432340 NCOA1Q15788 1441 aa26.74■■□□□ 1.87
NUP50-209ENST00000432340 CDK11AQ9UQ88 783 aaPredicted RBP26.71■■□□□ 1.87
NUP50-209ENST00000432340 RANGAP1P46060 587 aaPredicted RBP26.7■■□□□ 1.86
NUP50-209ENST00000432340 CSRNP3Q8WYN3 585 aa26.7■■□□□ 1.86
NUP50-209ENST00000432340 CNTLNQ9NXG0 1405 aa26.69■■□□□ 1.86
NUP50-209ENST00000432340 AFAP1Q8N556 730 aa26.65■■□□□ 1.86
NUP50-209ENST00000432340 PKD2Q13563 968 aa26.63■■□□□ 1.85
NUP50-209ENST00000432340 REREQ9P2R6 1566 aa26.63■■□□□ 1.85
NUP50-209ENST00000432340 AGLP35573 1532 aa26.61■■□□□ 1.85
NUP50-209ENST00000432340 NPATQ14207 1427 aa26.61■■□□□ 1.85
NUP50-209ENST00000432340 ZNF335Q9H4Z2 1342 aaPredicted RBP26.6■■□□□ 1.85
NUP50-209ENST00000432340 KDM5CP41229 1560 aa26.58■■□□□ 1.85
NUP50-209ENST00000432340 MLH3Q9UHC1 1453 aa26.56■■□□□ 1.84
NUP50-209ENST00000432340 PHF23Q9BUL5 403 aaPredicted RBP26.56■■□□□ 1.84
NUP50-209ENST00000432340 CAMSAP1Q5T5Y3 1602 aa26.54■■□□□ 1.84
NUP50-209ENST00000432340 C3P01024 1663 aa26.54■■□□□ 1.84
NUP50-209ENST00000432340 TOM1O60784 492 aa26.53■■□□□ 1.84
NUP50-209ENST00000432340 SCAF1Q9H7N4 1312 aaKnown RBP26.53■■□□□ 1.84
NUP50-209ENST00000432340 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
NUP50-209ENST00000432340 ARHGAP5Q13017 1502 aa26.53■■□□□ 1.84
NUP50-209ENST00000432340 CDK13Q14004 1512 aaKnown RBP26.53■■□□□ 1.84
NUP50-209ENST00000432340 DIP2CQ9Y2E4 1556 aa26.52■■□□□ 1.84
NUP50-209ENST00000432340 ATP1B4Q9UN42 357 aaPredicted RBP26.51■■□□□ 1.83
NUP50-209ENST00000432340 PLA2R1Q13018 1463 aa26.5■■□□□ 1.83
NUP50-209ENST00000432340 HSPA1LP34931 641 aa26.5■■□□□ 1.83
NUP50-209ENST00000432340 CLIP1P30622 1438 aa26.49■■□□□ 1.83
NUP50-209ENST00000432340 PPP6R1Q9UPN7 881 aa26.48■■□□□ 1.83
NUP50-209ENST00000432340 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
NUP50-209ENST00000432340 MED1Q15648 1581 aaPredicted RBP26.47■■□□□ 1.83
NUP50-209ENST00000432340 EEA1Q15075 1411 aa26.46■■□□□ 1.83
NUP50-209ENST00000432340 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
NUP50-209ENST00000432340 FMN1Q68DA7 1419 aa26.45■■□□□ 1.82
NUP50-209ENST00000432340 PIP4K2BP78356 416 aa26.44■■□□□ 1.82
NUP50-209ENST00000432340 TROQ12816 1431 aaPredicted RBP26.43■■□□□ 1.82
NUP50-209ENST00000432340 KIF14Q15058 1648 aa26.43■■□□□ 1.82
NUP50-209ENST00000432340 TCOF1Q13428 1488 aaKnown RBP26.39■■□□□ 1.82
NUP50-209ENST00000432340 ABCA6Q8N139 1617 aa26.39■■□□□ 1.81
NUP50-209ENST00000432340 CPS1P31327 1500 aa26.33■■□□□ 1.81
NUP50-209ENST00000432340 MROH2AA6NES4 1674 aa26.31■■□□□ 1.8
NUP50-209ENST00000432340 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
NUP50-209ENST00000432340 ABCC1P33527 1531 aa26.29■■□□□ 1.8
NUP50-209ENST00000432340 CEP170BQ9Y4F5 1589 aaPredicted RBP26.28■■□□□ 1.8
NUP50-209ENST00000432340 SPAG9O60271 1321 aaKnown RBP26.25■■□□□ 1.79
NUP50-209ENST00000432340 ZNF142P52746 1687 aaPredicted RBP26.24■■□□□ 1.79
NUP50-209ENST00000432340 SHANK2Q9UPX8 1470 aa26.22■■□□□ 1.79
NUP50-209ENST00000432340 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
NUP50-209ENST00000432340 A2ML1A8K2U0 1454 aa26.2■■□□□ 1.78
NUP50-209ENST00000432340 GGT6Q6P531 493 aa26.18■■□□□ 1.78
NUP50-209ENST00000432340 KIDINS220Q9ULH0 1771 aa26.18■■□□□ 1.78
NUP50-209ENST00000432340 ANKLE2Q86XL3 938 aa26.16■■□□□ 1.78
NUP50-209ENST00000432340 PREX2Q70Z35 1606 aa26.15■■□□□ 1.78
NUP50-209ENST00000432340 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
NUP50-209ENST00000432340 ZNF777Q9ULD5 760 aaPredicted RBP26.15■■□□□ 1.78
NUP50-209ENST00000432340 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
NUP50-209ENST00000432340 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
NUP50-209ENST00000432340 A2MP01023 1474 aa26.12■■□□□ 1.77
NUP50-209ENST00000432340 CDC42BPBQ9Y5S2 1711 aa26.11■■□□□ 1.77
NUP50-209ENST00000432340 SUPT6HQ7KZ85 1726 aaKnown RBP26.09■■□□□ 1.77
NUP50-209ENST00000432340 THEMISQ8N1K5 641 aaPredicted RBP26.09■■□□□ 1.77
NUP50-209ENST00000432340 CCDC18Q5T9S5 1454 aa26.09■■□□□ 1.77
NUP50-209ENST00000432340 PLEKHH2Q8IVE3 1493 aa26.08■■□□□ 1.77
NUP50-209ENST00000432340 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
NUP50-209ENST00000432340 KIAA1107Q9UPP5 1409 aa26.07■■□□□ 1.76
NUP50-209ENST00000432340 CLTCQ00610 1675 aaKnown RBP26.07■■□□□ 1.76
NUP50-209ENST00000432340 TNRQ92752 1358 aa26.06■■□□□ 1.76
NUP50-209ENST00000432340 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
NUP50-209ENST00000432340 ATP7AQ04656 1500 aa26.04■■□□□ 1.76
NUP50-209ENST00000432340 DNMT1P26358 1616 aaKnown RBP26.04■■□□□ 1.76
NUP50-209ENST00000432340 PLXNC1O60486 1568 aa26.03■■□□□ 1.76
NUP50-209ENST00000432340 SYCP2Q9BX26 1530 aa26.01■■□□□ 1.75
NUP50-209ENST00000432340 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
NUP50-209ENST00000432340 NPHP4O75161 1426 aaPredicted RBP25.99■■□□□ 1.75
NUP50-209ENST00000432340 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
NUP50-209ENST00000432340 RGS17Q9UGC6 210 aaPredicted RBP25.98■■□□□ 1.75
NUP50-209ENST00000432340 NEURL4Q96JN8 1562 aa25.98■■□□□ 1.75
NUP50-209ENST00000432340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.97■■□□□ 1.75
NUP50-209ENST00000432340 CASKIN1Q8WXD9 1431 aa25.97■■□□□ 1.75
NUP50-209ENST00000432340 VWDEQ8N2E2 1590 aa25.96■■□□□ 1.75
NUP50-209ENST00000432340 MED14O60244 1454 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms