RNA–Protein interactions for RNA: ENST00000432287.6

SDHC-204, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-204ENST00000432287 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.38
SDHC-204ENST00000432287 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
SDHC-204ENST00000432287 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
SDHC-204ENST00000432287 IQSEC2Q5JU85 1478 aa12.68□□□□□ -0.38
SDHC-204ENST00000432287 CFAP74Q9C0B2 1584 aa12.65□□□□□ -0.38
SDHC-204ENST00000432287 C3P01024 1663 aa12.65□□□□□ -0.38
SDHC-204ENST00000432287 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
SDHC-204ENST00000432287 ATP10AO60312 1499 aa12.65□□□□□ -0.38
SDHC-204ENST00000432287 UHRF1BP1Q6BDS2 1440 aa12.63□□□□□ -0.39
SDHC-204ENST00000432287 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
SDHC-204ENST00000432287 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
SDHC-204ENST00000432287 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SDHC-204ENST00000432287 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
SDHC-204ENST00000432287 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
SDHC-204ENST00000432287 PLCH2O75038 1416 aa12.58□□□□□ -0.4
SDHC-204ENST00000432287 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
SDHC-204ENST00000432287 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
SDHC-204ENST00000432287 KDM5CP41229 1560 aa12.57□□□□□ -0.4
SDHC-204ENST00000432287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
SDHC-204ENST00000432287 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
SDHC-204ENST00000432287 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
SDHC-204ENST00000432287 CDK13Q14004 1512 aaKnown RBP12.55□□□□□ -0.4
SDHC-204ENST00000432287 REREQ9P2R6 1566 aa12.55□□□□□ -0.4
SDHC-204ENST00000432287 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
SDHC-204ENST00000432287 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
SDHC-204ENST00000432287 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
SDHC-204ENST00000432287 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
SDHC-204ENST00000432287 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
SDHC-204ENST00000432287 HSPA1LP34931 641 aa12.52□□□□□ -0.41
SDHC-204ENST00000432287 AFAP1Q8N556 730 aa12.52□□□□□ -0.41
SDHC-204ENST00000432287 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
SDHC-204ENST00000432287 AGLP35573 1532 aa12.5□□□□□ -0.41
SDHC-204ENST00000432287 KIF14Q15058 1648 aa12.5□□□□□ -0.41
SDHC-204ENST00000432287 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
SDHC-204ENST00000432287 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
SDHC-204ENST00000432287 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
SDHC-204ENST00000432287 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.41
SDHC-204ENST00000432287 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.41
SDHC-204ENST00000432287 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
SDHC-204ENST00000432287 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
SDHC-204ENST00000432287 MROH2AA6NES4 1674 aa12.45□□□□□ -0.42
SDHC-204ENST00000432287 EFCAB2Q5VUJ9 269 aa12.44□□□□□ -0.42
SDHC-204ENST00000432287 RGS17Q9UGC6 210 aaPredicted RBP12.44□□□□□ -0.42
SDHC-204ENST00000432287 NPATQ14207 1427 aa12.44□□□□□ -0.42
SDHC-204ENST00000432287 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
SDHC-204ENST00000432287 MYO3AQ8NEV4 1616 aa12.43□□□□□ -0.42
SDHC-204ENST00000432287 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
SDHC-204ENST00000432287 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
SDHC-204ENST00000432287 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
SDHC-204ENST00000432287 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
SDHC-204ENST00000432287 CEP170BQ9Y4F5 1589 aaPredicted RBP12.4□□□□□ -0.42
SDHC-204ENST00000432287 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
SDHC-204ENST00000432287 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
SDHC-204ENST00000432287 PTPRKQ15262 1439 aa12.39□□□□□ -0.43
SDHC-204ENST00000432287 ABCC1P33527 1531 aa12.39□□□□□ -0.43
SDHC-204ENST00000432287 CNTLNQ9NXG0 1405 aa12.38□□□□□ -0.43
SDHC-204ENST00000432287 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
SDHC-204ENST00000432287 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
SDHC-204ENST00000432287 PIP4K2BP78356 416 aa12.38□□□□□ -0.43
SDHC-204ENST00000432287 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
SDHC-204ENST00000432287 PKD2Q13563 968 aa12.37□□□□□ -0.43
SDHC-204ENST00000432287 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
SDHC-204ENST00000432287 VWDEQ8N2E2 1590 aa12.36□□□□□ -0.43
SDHC-204ENST00000432287 DNMT1P26358 1616 aaKnown RBP12.36□□□□□ -0.43
SDHC-204ENST00000432287 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
SDHC-204ENST00000432287 PREX2Q70Z35 1606 aa12.34□□□□□ -0.43
SDHC-204ENST00000432287 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
SDHC-204ENST00000432287 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
SDHC-204ENST00000432287 SAMD9LQ8IVG5 1584 aa12.34□□□□□ -0.43
SDHC-204ENST00000432287 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
SDHC-204ENST00000432287 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
SDHC-204ENST00000432287 CPS1P31327 1500 aa12.32□□□□□ -0.44
SDHC-204ENST00000432287 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
SDHC-204ENST00000432287 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
SDHC-204ENST00000432287 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
SDHC-204ENST00000432287 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
SDHC-204ENST00000432287 TOM1O60784 492 aa12.29□□□□□ -0.44
SDHC-204ENST00000432287 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
SDHC-204ENST00000432287 PHF23Q9BUL5 403 aaPredicted RBP12.28□□□□□ -0.44
SDHC-204ENST00000432287 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
SDHC-204ENST00000432287 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.44
SDHC-204ENST00000432287 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
SDHC-204ENST00000432287 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
SDHC-204ENST00000432287 SETD1AO15047 1707 aaKnown RBP12.26□□□□□ -0.45
SDHC-204ENST00000432287 LRRC7Q96NW7 1537 aa12.25□□□□□ -0.45
SDHC-204ENST00000432287 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
SDHC-204ENST00000432287 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
SDHC-204ENST00000432287 MED14O60244 1454 aa12.24□□□□□ -0.45
SDHC-204ENST00000432287 ATP7AQ04656 1500 aa12.23□□□□□ -0.45
SDHC-204ENST00000432287 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
SDHC-204ENST00000432287 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
SDHC-204ENST00000432287 A2MP01023 1474 aa12.22□□□□□ -0.45
SDHC-204ENST00000432287 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
SDHC-204ENST00000432287 DEPDC5O75140 1603 aa12.21□□□□□ -0.46
SDHC-204ENST00000432287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.46
SDHC-204ENST00000432287 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
SDHC-204ENST00000432287 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
SDHC-204ENST00000432287 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
SDHC-204ENST00000432287 CLIP1P30622 1438 aa12.2□□□□□ -0.46
SDHC-204ENST00000432287 GGT6Q6P531 493 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms