RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
NEDD4L-206ENST00000431212 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
NEDD4L-206ENST00000431212 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
NEDD4L-206ENST00000431212 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
NEDD4L-206ENST00000431212 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
NEDD4L-206ENST00000431212 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
NEDD4L-206ENST00000431212 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
NEDD4L-206ENST00000431212 KDM6BO15054 1643 aa13.89□□□□□ -0.19
NEDD4L-206ENST00000431212 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
NEDD4L-206ENST00000431212 SPATA31E1Q6ZUB1 1445 aa13.89□□□□□ -0.19
NEDD4L-206ENST00000431212 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
NEDD4L-206ENST00000431212 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
NEDD4L-206ENST00000431212 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
NEDD4L-206ENST00000431212 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
NEDD4L-206ENST00000431212 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
NEDD4L-206ENST00000431212 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
NEDD4L-206ENST00000431212 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
NEDD4L-206ENST00000431212 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
NEDD4L-206ENST00000431212 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
NEDD4L-206ENST00000431212 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
NEDD4L-206ENST00000431212 DHX29Q7Z478 1369 aaKnown RBP13.84□□□□□ -0.19
NEDD4L-206ENST00000431212 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
NEDD4L-206ENST00000431212 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
NEDD4L-206ENST00000431212 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
NEDD4L-206ENST00000431212 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
NEDD4L-206ENST00000431212 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
NEDD4L-206ENST00000431212 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
NEDD4L-206ENST00000431212 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
NEDD4L-206ENST00000431212 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
NEDD4L-206ENST00000431212 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
NEDD4L-206ENST00000431212 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
NEDD4L-206ENST00000431212 USP47Q96K76 1375 aa13.78□□□□□ -0.2
NEDD4L-206ENST00000431212 ARID4BQ4LE39 1312 aaPredicted RBP13.78□□□□□ -0.2
NEDD4L-206ENST00000431212 USP35Q9P2H5 1018 aa13.78□□□□□ -0.2
NEDD4L-206ENST00000431212 NEFMP07197 916 aa13.77□□□□□ -0.21
NEDD4L-206ENST00000431212 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
NEDD4L-206ENST00000431212 EPRSP07814 1512 aaKnown RBP13.77□□□□□ -0.21
NEDD4L-206ENST00000431212 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
NEDD4L-206ENST00000431212 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
NEDD4L-206ENST00000431212 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
NEDD4L-206ENST00000431212 DAPK1P53355 1430 aa13.76□□□□□ -0.21
NEDD4L-206ENST00000431212 PDE4AP27815 886 aa13.75□□□□□ -0.21
NEDD4L-206ENST00000431212 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
NEDD4L-206ENST00000431212 ROCK2O75116 1388 aaKnown RBP13.75□□□□□ -0.21
NEDD4L-206ENST00000431212 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
NEDD4L-206ENST00000431212 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
NEDD4L-206ENST00000431212 NESP48681 1621 aa13.74□□□□□ -0.21
NEDD4L-206ENST00000431212 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
NEDD4L-206ENST00000431212 PPM1GO15355 546 aaPredicted RBP13.73□□□□□ -0.21
NEDD4L-206ENST00000431212 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
NEDD4L-206ENST00000431212 MS4A1P11836 297 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 ABCC5O15440 1437 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
NEDD4L-206ENST00000431212 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
NEDD4L-206ENST00000431212 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
NEDD4L-206ENST00000431212 MBD5Q9P267 1494 aa13.7□□□□□ -0.22
NEDD4L-206ENST00000431212 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
NEDD4L-206ENST00000431212 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
NEDD4L-206ENST00000431212 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
NEDD4L-206ENST00000431212 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
NEDD4L-206ENST00000431212 RALBP1Q15311 655 aa13.69□□□□□ -0.22
NEDD4L-206ENST00000431212 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
NEDD4L-206ENST00000431212 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
NEDD4L-206ENST00000431212 PZPP20742 1482 aa13.68□□□□□ -0.22
NEDD4L-206ENST00000431212 KDM5CP41229 1560 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 KIF14Q15058 1648 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
NEDD4L-206ENST00000431212 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
NEDD4L-206ENST00000431212 WDR62O43379 1518 aa13.66□□□□□ -0.22
NEDD4L-206ENST00000431212 PKD2Q13563 968 aa13.65□□□□□ -0.22
NEDD4L-206ENST00000431212 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
NEDD4L-206ENST00000431212 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
NEDD4L-206ENST00000431212 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
NEDD4L-206ENST00000431212 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
NEDD4L-206ENST00000431212 UHRF1BP1Q6BDS2 1440 aa13.61□□□□□ -0.23
NEDD4L-206ENST00000431212 GSE1Q14687 1217 aa13.61□□□□□ -0.23
NEDD4L-206ENST00000431212 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
NEDD4L-206ENST00000431212 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
NEDD4L-206ENST00000431212 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
NEDD4L-206ENST00000431212 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
NEDD4L-206ENST00000431212 PLIN1O60240 522 aa13.58□□□□□ -0.24
NEDD4L-206ENST00000431212 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
NEDD4L-206ENST00000431212 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
NEDD4L-206ENST00000431212 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
NEDD4L-206ENST00000431212 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
NEDD4L-206ENST00000431212 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
NEDD4L-206ENST00000431212 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
NEDD4L-206ENST00000431212 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
NEDD4L-206ENST00000431212 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
NEDD4L-206ENST00000431212 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
NEDD4L-206ENST00000431212 SKAP1Q86WV1 359 aa13.55□□□□□ -0.24
NEDD4L-206ENST00000431212 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
NEDD4L-206ENST00000431212 ADGBQ8N7X0 1667 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms