RNA–Protein interactions for RNA: ENST00000430750.1

UBE3C-203, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 4

Gene UBE3C, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-203ENST00000430750 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
UBE3C-203ENST00000430750 CEBPAP49715 358 aaPredicted RBP18.66■□□□□ 0.58
UBE3C-203ENST00000430750 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
UBE3C-203ENST00000430750 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
UBE3C-203ENST00000430750 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
UBE3C-203ENST00000430750 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
UBE3C-203ENST00000430750 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
UBE3C-203ENST00000430750 ATP10AO60312 1499 aa18.6■□□□□ 0.57
UBE3C-203ENST00000430750 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
UBE3C-203ENST00000430750 PLCH2O75038 1416 aa18.57■□□□□ 0.56
UBE3C-203ENST00000430750 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
UBE3C-203ENST00000430750 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
UBE3C-203ENST00000430750 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
UBE3C-203ENST00000430750 SPATA31D1Q6ZQQ2 1576 aa18.53■□□□□ 0.56
UBE3C-203ENST00000430750 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
UBE3C-203ENST00000430750 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
UBE3C-203ENST00000430750 PTPRTO14522 1441 aa18.49■□□□□ 0.55
UBE3C-203ENST00000430750 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
UBE3C-203ENST00000430750 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
UBE3C-203ENST00000430750 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
UBE3C-203ENST00000430750 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
UBE3C-203ENST00000430750 C3P01024 1663 aa18.44■□□□□ 0.54
UBE3C-203ENST00000430750 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
UBE3C-203ENST00000430750 KDM5CP41229 1560 aa18.42■□□□□ 0.54
UBE3C-203ENST00000430750 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
UBE3C-203ENST00000430750 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
UBE3C-203ENST00000430750 KIF14Q15058 1648 aa18.41■□□□□ 0.54
UBE3C-203ENST00000430750 EEA1Q15075 1411 aa18.4■□□□□ 0.54
UBE3C-203ENST00000430750 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.53
UBE3C-203ENST00000430750 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
UBE3C-203ENST00000430750 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.53
UBE3C-203ENST00000430750 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
UBE3C-203ENST00000430750 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
UBE3C-203ENST00000430750 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
UBE3C-203ENST00000430750 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
UBE3C-203ENST00000430750 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
UBE3C-203ENST00000430750 MLH3Q9UHC1 1453 aa18.36■□□□□ 0.53
UBE3C-203ENST00000430750 AGLP35573 1532 aa18.34■□□□□ 0.53
UBE3C-203ENST00000430750 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.53
UBE3C-203ENST00000430750 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
UBE3C-203ENST00000430750 CDC42BPBQ9Y5S2 1711 aa18.32■□□□□ 0.52
UBE3C-203ENST00000430750 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
UBE3C-203ENST00000430750 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
UBE3C-203ENST00000430750 UBAP1LF5GYI3 381 aa18.31■□□□□ 0.52
UBE3C-203ENST00000430750 ZNF335Q9H4Z2 1342 aaPredicted RBP18.3■□□□□ 0.52
UBE3C-203ENST00000430750 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
UBE3C-203ENST00000430750 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
UBE3C-203ENST00000430750 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
UBE3C-203ENST00000430750 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
UBE3C-203ENST00000430750 CLIP1P30622 1438 aa18.28■□□□□ 0.52
UBE3C-203ENST00000430750 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
UBE3C-203ENST00000430750 ABCC1P33527 1531 aa18.27■□□□□ 0.51
UBE3C-203ENST00000430750 NPATQ14207 1427 aa18.26■□□□□ 0.51
UBE3C-203ENST00000430750 ITSN2Q9NZM3 1697 aa18.25■□□□□ 0.51
UBE3C-203ENST00000430750 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
UBE3C-203ENST00000430750 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
UBE3C-203ENST00000430750 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
UBE3C-203ENST00000430750 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
UBE3C-203ENST00000430750 PKD2Q13563 968 aa18.19■□□□□ 0.5
UBE3C-203ENST00000430750 SAMD9LQ8IVG5 1584 aa18.18■□□□□ 0.5
UBE3C-203ENST00000430750 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
UBE3C-203ENST00000430750 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
UBE3C-203ENST00000430750 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
UBE3C-203ENST00000430750 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
UBE3C-203ENST00000430750 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
UBE3C-203ENST00000430750 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
UBE3C-203ENST00000430750 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
UBE3C-203ENST00000430750 HSPA1LP34931 641 aa18.16■□□□□ 0.5
UBE3C-203ENST00000430750 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.52e-8■■■■■ 28.8
UBE3C-203ENST00000430750 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
UBE3C-203ENST00000430750 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
UBE3C-203ENST00000430750 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.49
UBE3C-203ENST00000430750 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
UBE3C-203ENST00000430750 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
UBE3C-203ENST00000430750 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
UBE3C-203ENST00000430750 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
UBE3C-203ENST00000430750 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
UBE3C-203ENST00000430750 GGT6Q6P531 493 aa18.11■□□□□ 0.49
UBE3C-203ENST00000430750 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
UBE3C-203ENST00000430750 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
UBE3C-203ENST00000430750 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
UBE3C-203ENST00000430750 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
UBE3C-203ENST00000430750 A2MP01023 1474 aa18.08■□□□□ 0.49
UBE3C-203ENST00000430750 ATP7AQ04656 1500 aa18.08■□□□□ 0.48
UBE3C-203ENST00000430750 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
UBE3C-203ENST00000430750 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
UBE3C-203ENST00000430750 TOM1O60784 492 aa18.06■□□□□ 0.48
UBE3C-203ENST00000430750 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
UBE3C-203ENST00000430750 A2ML1A8K2U0 1454 aa18.05■□□□□ 0.48
UBE3C-203ENST00000430750 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
UBE3C-203ENST00000430750 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
UBE3C-203ENST00000430750 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
UBE3C-203ENST00000430750 CPS1P31327 1500 aa18.02■□□□□ 0.47
UBE3C-203ENST00000430750 FBXO31Q5XUX0 539 aaPredicted RBP18■□□□□ 0.47
UBE3C-203ENST00000430750 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
UBE3C-203ENST00000430750 POLR1AO95602 1720 aaPredicted RBP18■□□□□ 0.47
UBE3C-203ENST00000430750 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
UBE3C-203ENST00000430750 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
UBE3C-203ENST00000430750 PLEKHH2Q8IVE3 1493 aa17.98■□□□□ 0.47
UBE3C-203ENST00000430750 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms