RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 EXOC6Q8TAG9 804 aa14.85□□□□□ -0.03
SEMA4D-209ENST00000429836 NBPF8Q3BBV2 869 aa14.84□□□□□ -0.03
SEMA4D-209ENST00000429836 DENND4BO75064 1496 aaPredicted RBP14.84□□□□□ -0.03
SEMA4D-209ENST00000429836 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
SEMA4D-209ENST00000429836 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
SEMA4D-209ENST00000429836 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.03
SEMA4D-209ENST00000429836 BACH2Q9BYV9 841 aa14.83□□□□□ -0.04
SEMA4D-209ENST00000429836 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
SEMA4D-209ENST00000429836 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
SEMA4D-209ENST00000429836 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
SEMA4D-209ENST00000429836 SKAP1Q86WV1 359 aa14.82□□□□□ -0.04
SEMA4D-209ENST00000429836 GSE1Q14687 1217 aa14.81□□□□□ -0.04
SEMA4D-209ENST00000429836 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
SEMA4D-209ENST00000429836 SLC4A3P48751 1232 aa14.79□□□□□ -0.04
SEMA4D-209ENST00000429836 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
SEMA4D-209ENST00000429836 FRAT1Q92837 279 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-209ENST00000429836 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
SEMA4D-209ENST00000429836 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
SEMA4D-209ENST00000429836 NFKBIBQ15653 356 aa14.77□□□□□ -0.04
SEMA4D-209ENST00000429836 KDM6BO15054 1643 aa14.77□□□□□ -0.05
SEMA4D-209ENST00000429836 DHX29Q7Z478 1369 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-209ENST00000429836 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.05
SEMA4D-209ENST00000429836 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
SEMA4D-209ENST00000429836 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
SEMA4D-209ENST00000429836 SPATA31E1Q6ZUB1 1445 aa14.74□□□□□ -0.05
SEMA4D-209ENST00000429836 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
SEMA4D-209ENST00000429836 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
SEMA4D-209ENST00000429836 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
SEMA4D-209ENST00000429836 MS4A1P11836 297 aa14.72□□□□□ -0.05
SEMA4D-209ENST00000429836 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
SEMA4D-209ENST00000429836 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
SEMA4D-209ENST00000429836 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.06
SEMA4D-209ENST00000429836 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
SEMA4D-209ENST00000429836 ZNF326Q5BKZ1 582 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-209ENST00000429836 PLIN1O60240 522 aa14.69□□□□□ -0.06
SEMA4D-209ENST00000429836 DDRGK1Q96HY6 314 aa14.69□□□□□ -0.06
SEMA4D-209ENST00000429836 EFCAB5A4FU69 1503 aa14.69□□□□□ -0.06
SEMA4D-209ENST00000429836 POLR1AO95602 1720 aaPredicted RBP14.68□□□□□ -0.06
SEMA4D-209ENST00000429836 LRRIQ1Q96JM4 1722 aa14.68□□□□□ -0.06
SEMA4D-209ENST00000429836 TEX14Q8IWB6 1497 aa14.67□□□□□ -0.06
SEMA4D-209ENST00000429836 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
SEMA4D-209ENST00000429836 GCC2Q8IWJ2 1684 aa14.66□□□□□ -0.06
SEMA4D-209ENST00000429836 DCAF11Q8TEB1 546 aa14.66□□□□□ -0.06
SEMA4D-209ENST00000429836 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
SEMA4D-209ENST00000429836 DAXXQ9UER7 740 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-209ENST00000429836 BCORL1Q5H9F3 1711 aa14.65□□□□□ -0.06
SEMA4D-209ENST00000429836 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
SEMA4D-209ENST00000429836 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-209ENST00000429836 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
SEMA4D-209ENST00000429836 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
SEMA4D-209ENST00000429836 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-209ENST00000429836 CDCA7LQ96GN5 454 aa14.63□□□□□ -0.07
SEMA4D-209ENST00000429836 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
SEMA4D-209ENST00000429836 USP47Q96K76 1375 aa14.62□□□□□ -0.07
SEMA4D-209ENST00000429836 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
SEMA4D-209ENST00000429836 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
SEMA4D-209ENST00000429836 LRPPRCP42704 1394 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-209ENST00000429836 UGGT2Q9NYU1 1516 aa14.6□□□□□ -0.07
SEMA4D-209ENST00000429836 FAM43AQ8N2R8 423 aa14.6□□□□□ -0.07
SEMA4D-209ENST00000429836 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-209ENST00000429836 MAGI3Q5TCQ9 1506 aa14.6□□□□□ -0.07
SEMA4D-209ENST00000429836 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
SEMA4D-209ENST00000429836 EHBP1L1Q8N3D4 1523 aa14.59□□□□□ -0.07
SEMA4D-209ENST00000429836 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
SEMA4D-209ENST00000429836 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
SEMA4D-209ENST00000429836 THOC2Q8NI27 1593 aaKnown RBP14.58□□□□□ -0.08
SEMA4D-209ENST00000429836 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
SEMA4D-209ENST00000429836 CTTNBP2Q8WZ74 1663 aa14.58□□□□□ -0.08
SEMA4D-209ENST00000429836 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
SEMA4D-209ENST00000429836 WDR62O43379 1518 aa14.56□□□□□ -0.08
SEMA4D-209ENST00000429836 TCOF1Q13428 1488 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-209ENST00000429836 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
SEMA4D-209ENST00000429836 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-209ENST00000429836 KIF15Q9NS87 1388 aa14.55□□□□□ -0.08
SEMA4D-209ENST00000429836 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
SEMA4D-209ENST00000429836 ARHGEF11O15085 1522 aa14.54□□□□□ -0.08
SEMA4D-209ENST00000429836 RRAGDQ9NQL2 400 aaPredicted RBP14.53□□□□□ -0.08
SEMA4D-209ENST00000429836 C8orf34Q49A92 452 aa14.52□□□□□ -0.09
SEMA4D-209ENST00000429836 POGKQ9P215 609 aa14.52□□□□□ -0.09
SEMA4D-209ENST00000429836 PDE3BQ13370 1112 aa14.51□□□□□ -0.09
SEMA4D-209ENST00000429836 FAM161AQ3B820 660 aa14.51□□□□□ -0.09
SEMA4D-209ENST00000429836 RGS3P49796 1198 aa14.5□□□□□ -0.09
SEMA4D-209ENST00000429836 KDM5CP41229 1560 aa14.5□□□□□ -0.09
SEMA4D-209ENST00000429836 RALBP1Q15311 655 aa14.49□□□□□ -0.09
SEMA4D-209ENST00000429836 KDM2BQ8NHM5 1336 aa14.49□□□□□ -0.09
SEMA4D-209ENST00000429836 ARXQ96QS3 562 aa14.49□□□□□ -0.09
SEMA4D-209ENST00000429836 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
SEMA4D-209ENST00000429836 CARD11Q9BXL7 1154 aa14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 ROCK2O75116 1388 aaKnown RBP14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 MBD5Q9P267 1494 aa14.48□□□□□ -0.09
SEMA4D-209ENST00000429836 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
SEMA4D-209ENST00000429836 NLRP13Q86W25 1043 aa14.46□□□□□ -0.1
SEMA4D-209ENST00000429836 CUL7Q14999 1698 aa14.45□□□□□ -0.1
SEMA4D-209ENST00000429836 ABCA10Q8WWZ4 1543 aa14.45□□□□□ -0.1
SEMA4D-209ENST00000429836 CENPQQ7L2Z9 268 aaPredicted RBP14.45□□□□□ -0.1
SEMA4D-209ENST00000429836 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms