RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
RAE1-205ENST00000429339 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
RAE1-205ENST00000429339 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
RAE1-205ENST00000429339 C3P01024 1663 aa17.67■□□□□ 0.42
RAE1-205ENST00000429339 SCAPERQ9BY12 1400 aa17.66■□□□□ 0.42
RAE1-205ENST00000429339 ATP10AO60312 1499 aa17.65■□□□□ 0.42
RAE1-205ENST00000429339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
RAE1-205ENST00000429339 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
RAE1-205ENST00000429339 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
RAE1-205ENST00000429339 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
RAE1-205ENST00000429339 PTPRTO14522 1441 aa17.62■□□□□ 0.41
RAE1-205ENST00000429339 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
RAE1-205ENST00000429339 PLCH2O75038 1416 aa17.61■□□□□ 0.41
RAE1-205ENST00000429339 KIF14Q15058 1648 aa17.61■□□□□ 0.41
RAE1-205ENST00000429339 KDM5CP41229 1560 aa17.6■□□□□ 0.41
RAE1-205ENST00000429339 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
RAE1-205ENST00000429339 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.41
RAE1-205ENST00000429339 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
RAE1-205ENST00000429339 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
RAE1-205ENST00000429339 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
RAE1-205ENST00000429339 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
RAE1-205ENST00000429339 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
RAE1-205ENST00000429339 LRRIQ1Q96JM4 1722 aa17.54■□□□□ 0.4
RAE1-205ENST00000429339 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
RAE1-205ENST00000429339 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
RAE1-205ENST00000429339 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
RAE1-205ENST00000429339 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
RAE1-205ENST00000429339 ZNF335Q9H4Z2 1342 aaPredicted RBP17.49■□□□□ 0.39
RAE1-205ENST00000429339 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
RAE1-205ENST00000429339 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
RAE1-205ENST00000429339 ZNF518AQ6AHZ1 1483 aa17.47■□□□□ 0.39
RAE1-205ENST00000429339 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
RAE1-205ENST00000429339 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
RAE1-205ENST00000429339 AGLP35573 1532 aa17.46■□□□□ 0.39
RAE1-205ENST00000429339 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
RAE1-205ENST00000429339 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
RAE1-205ENST00000429339 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
RAE1-205ENST00000429339 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
RAE1-205ENST00000429339 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
RAE1-205ENST00000429339 ABCC1P33527 1531 aa17.41■□□□□ 0.38
RAE1-205ENST00000429339 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
RAE1-205ENST00000429339 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
RAE1-205ENST00000429339 ZNF142P52746 1687 aaPredicted RBP17.39■□□□□ 0.37
RAE1-205ENST00000429339 TCOF1Q13428 1488 aaKnown RBP17.38■□□□□ 0.37
RAE1-205ENST00000429339 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
RAE1-205ENST00000429339 MYO3AQ8NEV4 1616 aa17.38■□□□□ 0.37
RAE1-205ENST00000429339 MROH2AA6NES4 1674 aa17.37■□□□□ 0.37
RAE1-205ENST00000429339 HSPA1LP34931 641 aa17.36■□□□□ 0.37
RAE1-205ENST00000429339 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
RAE1-205ENST00000429339 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
RAE1-205ENST00000429339 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
RAE1-205ENST00000429339 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
RAE1-205ENST00000429339 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
RAE1-205ENST00000429339 NPATQ14207 1427 aa17.33■□□□□ 0.36
RAE1-205ENST00000429339 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.36
RAE1-205ENST00000429339 NEURL4Q96JN8 1562 aa17.32■□□□□ 0.36
RAE1-205ENST00000429339 CEP170BQ9Y4F5 1589 aaPredicted RBP17.32■□□□□ 0.36
RAE1-205ENST00000429339 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
RAE1-205ENST00000429339 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
RAE1-205ENST00000429339 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
RAE1-205ENST00000429339 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
RAE1-205ENST00000429339 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
RAE1-205ENST00000429339 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
RAE1-205ENST00000429339 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
RAE1-205ENST00000429339 DNMT1P26358 1616 aaKnown RBP17.25■□□□□ 0.35
RAE1-205ENST00000429339 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
RAE1-205ENST00000429339 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
RAE1-205ENST00000429339 SYCP2Q9BX26 1530 aa17.23■□□□□ 0.35
RAE1-205ENST00000429339 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
RAE1-205ENST00000429339 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
RAE1-205ENST00000429339 RGS17Q9UGC6 210 aaPredicted RBP17.22■□□□□ 0.35
RAE1-205ENST00000429339 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
RAE1-205ENST00000429339 PIP4K2BP78356 416 aa17.21■□□□□ 0.35
RAE1-205ENST00000429339 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
RAE1-205ENST00000429339 POLR1AO95602 1720 aaPredicted RBP17.21■□□□□ 0.35
RAE1-205ENST00000429339 FMN1Q68DA7 1419 aa17.21■□□□□ 0.34
RAE1-205ENST00000429339 EEA1Q15075 1411 aa17.19■□□□□ 0.34
RAE1-205ENST00000429339 ATP7AQ04656 1500 aa17.18■□□□□ 0.34
RAE1-205ENST00000429339 PKD2Q13563 968 aa17.18■□□□□ 0.34
RAE1-205ENST00000429339 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
RAE1-205ENST00000429339 SHANK2Q9UPX8 1470 aa17.17■□□□□ 0.34
RAE1-205ENST00000429339 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
RAE1-205ENST00000429339 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
RAE1-205ENST00000429339 CLIP1P30622 1438 aa17.14■□□□□ 0.33
RAE1-205ENST00000429339 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.33
RAE1-205ENST00000429339 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
RAE1-205ENST00000429339 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
RAE1-205ENST00000429339 A2MP01023 1474 aa17.13■□□□□ 0.33
RAE1-205ENST00000429339 CPS1P31327 1500 aa17.13■□□□□ 0.33
RAE1-205ENST00000429339 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
RAE1-205ENST00000429339 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
RAE1-205ENST00000429339 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
RAE1-205ENST00000429339 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
RAE1-205ENST00000429339 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
RAE1-205ENST00000429339 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
RAE1-205ENST00000429339 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
RAE1-205ENST00000429339 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
RAE1-205ENST00000429339 GGT6Q6P531 493 aa17.07■□□□□ 0.32
RAE1-205ENST00000429339 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
RAE1-205ENST00000429339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms