RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
PMPCB-202ENST00000428154 DENND4BO75064 1496 aaPredicted RBP28.54■■■□□ 2.16
PMPCB-202ENST00000428154 TRIM52Q96A61 297 aa28.54■■■□□ 2.16
PMPCB-202ENST00000428154 FBLN2P98095 1184 aa28.53■■■□□ 2.16
PMPCB-202ENST00000428154 MPHOSPH9Q99550 1183 aa28.53■■■□□ 2.16
PMPCB-202ENST00000428154 PRG4Q92954 1404 aaPredicted RBP28.53■■■□□ 2.16
PMPCB-202ENST00000428154 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
PMPCB-202ENST00000428154 ARID3CA6NKF2 412 aa28.52■■■□□ 2.16
PMPCB-202ENST00000428154 CAMSAP2Q08AD1 1489 aa28.51■■■□□ 2.16
PMPCB-202ENST00000428154 ADGRL2O95490 1459 aa28.5■■■□□ 2.15
PMPCB-202ENST00000428154 CFDP1Q9UEE9 299 aaPredicted RBP28.48■■■□□ 2.15
PMPCB-202ENST00000428154 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
PMPCB-202ENST00000428154 DDX10Q13206 875 aaKnown RBP28.46■■■□□ 2.15
PMPCB-202ENST00000428154 KIF14Q15058 1648 aa28.46■■■□□ 2.15
PMPCB-202ENST00000428154 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
PMPCB-202ENST00000428154 CCER2I3L3R5 266 aa28.43■■■□□ 2.14
PMPCB-202ENST00000428154 NCOA1Q15788 1441 aa28.41■■■□□ 2.14
PMPCB-202ENST00000428154 ANKRD30BQ9BXX2 1392 aa28.4■■■□□ 2.14
PMPCB-202ENST00000428154 ZNF644Q9H582 1327 aaPredicted RBP28.4■■■□□ 2.14
PMPCB-202ENST00000428154 ATP10BO94823 1461 aa28.4■■■□□ 2.14
PMPCB-202ENST00000428154 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
PMPCB-202ENST00000428154 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
PMPCB-202ENST00000428154 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.13
PMPCB-202ENST00000428154 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
PMPCB-202ENST00000428154 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
PMPCB-202ENST00000428154 ANP32CO43423 234 aa28.36■■■□□ 2.13
PMPCB-202ENST00000428154 PTPRGP23470 1445 aa28.32■■■□□ 2.12
PMPCB-202ENST00000428154 SHROOM2Q13796 1616 aa28.29■■■□□ 2.12
PMPCB-202ENST00000428154 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
PMPCB-202ENST00000428154 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
PMPCB-202ENST00000428154 PZPP20742 1482 aa28.28■■■□□ 2.12
PMPCB-202ENST00000428154 CHD1O14646 1710 aa28.27■■■□□ 2.12
PMPCB-202ENST00000428154 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
PMPCB-202ENST00000428154 TEX14Q8IWB6 1497 aa28.26■■■□□ 2.11
PMPCB-202ENST00000428154 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
PMPCB-202ENST00000428154 KIAA1107Q9UPP5 1409 aa28.23■■■□□ 2.11
PMPCB-202ENST00000428154 RSPH4AQ5TD94 716 aa28.22■■■□□ 2.11
PMPCB-202ENST00000428154 HIRIP3Q9BW71 556 aaPredicted RBP28.22■■■□□ 2.11
PMPCB-202ENST00000428154 ANKRD50Q9ULJ7 1429 aa28.21■■■□□ 2.11
PMPCB-202ENST00000428154 ZNF777Q9ULD5 760 aaPredicted RBP28.21■■■□□ 2.11
PMPCB-202ENST00000428154 C9orf84Q5VXU9 1444 aa28.2■■■□□ 2.1
PMPCB-202ENST00000428154 KDM5DQ9BY66 1539 aa28.2■■■□□ 2.1
PMPCB-202ENST00000428154 HSPA5P11021 654 aaKnown RBP28.19■■■□□ 2.1
PMPCB-202ENST00000428154 PREX2Q70Z35 1606 aa28.17■■■□□ 2.1
PMPCB-202ENST00000428154 TSPY4P0CV99 314 aa28.17■■■□□ 2.1
PMPCB-202ENST00000428154 TSPY10P0CW01 314 aa28.17■■■□□ 2.1
PMPCB-202ENST00000428154 FOXD1Q16676 465 aa28.13■■■□□ 2.09
PMPCB-202ENST00000428154 KCNH8Q96L42 1107 aa28.12■■■□□ 2.09
PMPCB-202ENST00000428154 POLR1AO95602 1720 aaPredicted RBP28.11■■■□□ 2.09
PMPCB-202ENST00000428154 CCDC141Q6ZP82 1450 aa28.11■■■□□ 2.09
PMPCB-202ENST00000428154 MBD5Q9P267 1494 aa28.11■■■□□ 2.09
PMPCB-202ENST00000428154 CDC42BPBQ9Y5S2 1711 aa28.1■■■□□ 2.09
PMPCB-202ENST00000428154 WASHC2AQ641Q2 1341 aa28.09■■■□□ 2.09
PMPCB-202ENST00000428154 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
PMPCB-202ENST00000428154 MAST1Q9Y2H9 1570 aa28.07■■■□□ 2.08
PMPCB-202ENST00000428154 CNTLNQ9NXG0 1405 aa28.06■■■□□ 2.08
PMPCB-202ENST00000428154 SAMD9LQ8IVG5 1584 aa28.06■■■□□ 2.08
PMPCB-202ENST00000428154 PLEKHH2Q8IVE3 1493 aa28.05■■■□□ 2.08
PMPCB-202ENST00000428154 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
PMPCB-202ENST00000428154 PKD2Q13563 968 aa28.04■■■□□ 2.08
PMPCB-202ENST00000428154 KIF15Q9NS87 1388 aa28.03■■■□□ 2.08
PMPCB-202ENST00000428154 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
PMPCB-202ENST00000428154 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
PMPCB-202ENST00000428154 CCDC7Q96M83 1385 aa28.02■■■□□ 2.08
PMPCB-202ENST00000428154 SUPT16HQ9Y5B9 1047 aaKnown RBP28.01■■■□□ 2.07
PMPCB-202ENST00000428154 NUP155O75694 1391 aa28.01■■■□□ 2.07
PMPCB-202ENST00000428154 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
PMPCB-202ENST00000428154 UHRF1BP1LA0JNW5 1464 aa27.98■■■□□ 2.07
PMPCB-202ENST00000428154 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
PMPCB-202ENST00000428154 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
PMPCB-202ENST00000428154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.96■■■□□ 2.07
PMPCB-202ENST00000428154 HNRNPMP52272 730 aaKnown RBP eCLIP27.95■■■□□ 2.06
PMPCB-202ENST00000428154 ARID4BQ4LE39 1312 aaPredicted RBP27.94■■■□□ 2.06
PMPCB-202ENST00000428154 ARHGAP5Q13017 1502 aa27.94■■■□□ 2.06
PMPCB-202ENST00000428154 PLXNC1O60486 1568 aa27.93■■■□□ 2.06
PMPCB-202ENST00000428154 TTC37Q6PGP7 1564 aa27.93■■■□□ 2.06
PMPCB-202ENST00000428154 UNC13BO14795 1591 aa27.89■■■□□ 2.06
PMPCB-202ENST00000428154 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
PMPCB-202ENST00000428154 SYCP2Q9BX26 1530 aa27.88■■■□□ 2.05
PMPCB-202ENST00000428154 FAM135AQ9P2D6 1515 aa27.86■■■□□ 2.05
PMPCB-202ENST00000428154 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
PMPCB-202ENST00000428154 ZCCHC11Q5TAX3 1644 aaKnown RBP27.84■■■□□ 2.05
PMPCB-202ENST00000428154 KDM5CP41229 1560 aa27.83■■■□□ 2.05
PMPCB-202ENST00000428154 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
PMPCB-202ENST00000428154 PLCH2O75038 1416 aa27.83■■■□□ 2.05
PMPCB-202ENST00000428154 C11orf95C9JLR9 678 aaPredicted RBP27.82■■■□□ 2.04
PMPCB-202ENST00000428154 USP47Q96K76 1375 aa27.82■■■□□ 2.04
PMPCB-202ENST00000428154 ARAP3Q8WWN8 1544 aa27.81■■■□□ 2.04
PMPCB-202ENST00000428154 DUOX2Q9NRD8 1548 aa27.81■■■□□ 2.04
PMPCB-202ENST00000428154 PRKRIP1Q9H875 184 aaPredicted RBP27.8■■■□□ 2.04
PMPCB-202ENST00000428154 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
PMPCB-202ENST00000428154 IQGAP3Q86VI3 1631 aa27.78■■■□□ 2.04
PMPCB-202ENST00000428154 NEFLP07196 543 aa27.78■■■□□ 2.04
PMPCB-202ENST00000428154 ERBINQ96RT1 1412 aa27.78■■■□□ 2.04
PMPCB-202ENST00000428154 EFCAB2Q5VUJ9 269 aa27.75■■■□□ 2.03
PMPCB-202ENST00000428154 MAGI2Q86UL8 1455 aa27.74■■■□□ 2.03
PMPCB-202ENST00000428154 ATP10AO60312 1499 aa27.72■■■□□ 2.03
PMPCB-202ENST00000428154 ABCC1P33527 1531 aa27.72■■■□□ 2.03
PMPCB-202ENST00000428154 CCDC144AA2RUR9 1427 aa27.71■■■□□ 2.03
PMPCB-202ENST00000428154 BCORL1Q5H9F3 1711 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms