RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
PDAP1-202ENST00000426447 HECW1Q76N89 1606 aa24.41■■□□□ 1.5
PDAP1-202ENST00000426447 CDK13Q14004 1512 aaKnown RBP24.4■■□□□ 1.5
PDAP1-202ENST00000426447 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
PDAP1-202ENST00000426447 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
PDAP1-202ENST00000426447 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.49
PDAP1-202ENST00000426447 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
PDAP1-202ENST00000426447 ATP10AO60312 1499 aa24.38■■□□□ 1.49
PDAP1-202ENST00000426447 CEBPAP49715 358 aaPredicted RBP24.36■■□□□ 1.49
PDAP1-202ENST00000426447 SIGLEC1Q9BZZ2 1709 aa24.35■■□□□ 1.49
PDAP1-202ENST00000426447 FER1L4A9Z1Z3 1794 aa24.33■■□□□ 1.49
PDAP1-202ENST00000426447 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
PDAP1-202ENST00000426447 DMRT2Q9Y5R5 561 aa24.32■■□□□ 1.48
PDAP1-202ENST00000426447 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
PDAP1-202ENST00000426447 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
PDAP1-202ENST00000426447 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
PDAP1-202ENST00000426447 ZNF518AQ6AHZ1 1483 aa24.25■■□□□ 1.47
PDAP1-202ENST00000426447 ESF1Q9H501 851 aaKnown RBP24.24■■□□□ 1.47
PDAP1-202ENST00000426447 MYO5CQ9NQX4 1742 aa24.23■■□□□ 1.47
PDAP1-202ENST00000426447 ARHGAP5Q13017 1502 aa24.22■■□□□ 1.47
PDAP1-202ENST00000426447 CLIP1P30622 1438 aa24.21■■□□□ 1.47
PDAP1-202ENST00000426447 UHRF1BP1Q6BDS2 1440 aa24.21■■□□□ 1.47
PDAP1-202ENST00000426447 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
PDAP1-202ENST00000426447 TROQ12816 1431 aaPredicted RBP24.19■■□□□ 1.46
PDAP1-202ENST00000426447 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
PDAP1-202ENST00000426447 KIF14Q15058 1648 aa24.17■■□□□ 1.46
PDAP1-202ENST00000426447 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
PDAP1-202ENST00000426447 KDM5CP41229 1560 aa24.12■■□□□ 1.45
PDAP1-202ENST00000426447 STRCQ7RTU9 1775 aa24.09■■□□□ 1.45
PDAP1-202ENST00000426447 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
PDAP1-202ENST00000426447 MLH3Q9UHC1 1453 aa24.09■■□□□ 1.45
PDAP1-202ENST00000426447 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
PDAP1-202ENST00000426447 ILDR2Q71H61 639 aa24.07■■□□□ 1.44
PDAP1-202ENST00000426447 PTPRTO14522 1441 aa24.07■■□□□ 1.44
PDAP1-202ENST00000426447 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
PDAP1-202ENST00000426447 REREQ9P2R6 1566 aa24.05■■□□□ 1.44
PDAP1-202ENST00000426447 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
PDAP1-202ENST00000426447 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
PDAP1-202ENST00000426447 AGLP35573 1532 aa24.02■■□□□ 1.44
PDAP1-202ENST00000426447 CDC42BPBQ9Y5S2 1711 aa24.01■■□□□ 1.43
PDAP1-202ENST00000426447 SOCS7O14512 581 aa24.01■■□□□ 1.43
PDAP1-202ENST00000426447 C3P01024 1663 aa24.01■■□□□ 1.43
PDAP1-202ENST00000426447 CNTLNQ9NXG0 1405 aa24■■□□□ 1.43
PDAP1-202ENST00000426447 ABCC1P33527 1531 aa23.98■■□□□ 1.43
PDAP1-202ENST00000426447 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
PDAP1-202ENST00000426447 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
PDAP1-202ENST00000426447 PREX2Q70Z35 1606 aa23.96■■□□□ 1.43
PDAP1-202ENST00000426447 CASKIN1Q8WXD9 1431 aa23.96■■□□□ 1.43
PDAP1-202ENST00000426447 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
PDAP1-202ENST00000426447 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
PDAP1-202ENST00000426447 NCOA1Q15788 1441 aa23.93■■□□□ 1.42
PDAP1-202ENST00000426447 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
PDAP1-202ENST00000426447 HNRNPMP52272 730 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDAP1-202ENST00000426447 ITSN2Q9NZM3 1697 aa23.92■■□□□ 1.42
PDAP1-202ENST00000426447 LTBP4Q8N2S1 1624 aa23.91■■□□□ 1.42
PDAP1-202ENST00000426447 KIDINS220Q9ULH0 1771 aa23.91■■□□□ 1.42
PDAP1-202ENST00000426447 NCKAP5LQ9HCH0 1330 aa23.9■■□□□ 1.42
PDAP1-202ENST00000426447 NPATQ14207 1427 aa23.89■■□□□ 1.41
PDAP1-202ENST00000426447 IQSEC2Q5JU85 1478 aa23.87■■□□□ 1.41
PDAP1-202ENST00000426447 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
PDAP1-202ENST00000426447 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
PDAP1-202ENST00000426447 GGT6Q6P531 493 aa23.86■■□□□ 1.41
PDAP1-202ENST00000426447 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
PDAP1-202ENST00000426447 SPATA31D1Q6ZQQ2 1576 aa23.85■■□□□ 1.41
PDAP1-202ENST00000426447 CDC42BPAQ5VT25 1732 aa23.84■■□□□ 1.41
PDAP1-202ENST00000426447 UBAP1LF5GYI3 381 aa23.84■■□□□ 1.41
PDAP1-202ENST00000426447 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
PDAP1-202ENST00000426447 PKD2Q13563 968 aa23.83■■□□□ 1.41
PDAP1-202ENST00000426447 SYCP2Q9BX26 1530 aa23.83■■□□□ 1.41
PDAP1-202ENST00000426447 GPATCH8Q9UKJ3 1502 aaKnown RBP23.83■■□□□ 1.41
PDAP1-202ENST00000426447 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
PDAP1-202ENST00000426447 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
PDAP1-202ENST00000426447 MROH2AA6NES4 1674 aa23.79■■□□□ 1.4
PDAP1-202ENST00000426447 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
PDAP1-202ENST00000426447 KIAA1107Q9UPP5 1409 aa23.78■■□□□ 1.4
PDAP1-202ENST00000426447 A2MP01023 1474 aa23.78■■□□□ 1.4
PDAP1-202ENST00000426447 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
PDAP1-202ENST00000426447 ATP7AQ04656 1500 aa23.77■■□□□ 1.4
PDAP1-202ENST00000426447 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
PDAP1-202ENST00000426447 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
PDAP1-202ENST00000426447 PTPRKQ15262 1439 aa23.74■■□□□ 1.39
PDAP1-202ENST00000426447 PLA2R1Q13018 1463 aa23.73■■□□□ 1.39
PDAP1-202ENST00000426447 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
PDAP1-202ENST00000426447 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
PDAP1-202ENST00000426447 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
PDAP1-202ENST00000426447 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
PDAP1-202ENST00000426447 MYO3AQ8NEV4 1616 aa23.68■■□□□ 1.38
PDAP1-202ENST00000426447 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
PDAP1-202ENST00000426447 INO80Q9ULG1 1556 aaPredicted RBP23.68■■□□□ 1.38
PDAP1-202ENST00000426447 TCOF1Q13428 1488 aaKnown RBP23.68■■□□□ 1.38
PDAP1-202ENST00000426447 ZNF142P52746 1687 aaPredicted RBP23.64■■□□□ 1.38
PDAP1-202ENST00000426447 PIP4K2BP78356 416 aa23.64■■□□□ 1.37
PDAP1-202ENST00000426447 A2ML1A8K2U0 1454 aa23.62■■□□□ 1.37
PDAP1-202ENST00000426447 KIF3BO15066 747 aa23.62■■□□□ 1.37
PDAP1-202ENST00000426447 TOM1O60784 492 aa23.62■■□□□ 1.37
PDAP1-202ENST00000426447 FBXO31Q5XUX0 539 aaPredicted RBP23.62■■□□□ 1.37
PDAP1-202ENST00000426447 DHX29Q7Z478 1369 aaKnown RBP23.61■■□□□ 1.37
PDAP1-202ENST00000426447 ADGBQ8N7X0 1667 aa23.6■■□□□ 1.37
PDAP1-202ENST00000426447 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
PDAP1-202ENST00000426447 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms