RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
SMIM27-201ENST00000425533 UHRF1BP1Q6BDS2 1440 aa16.66■□□□□ 0.26
SMIM27-201ENST00000425533 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
SMIM27-201ENST00000425533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
SMIM27-201ENST00000425533 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
SMIM27-201ENST00000425533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMIM27-201ENST00000425533 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
SMIM27-201ENST00000425533 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
SMIM27-201ENST00000425533 ATP10AO60312 1499 aa16.59■□□□□ 0.25
SMIM27-201ENST00000425533 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
SMIM27-201ENST00000425533 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SMIM27-201ENST00000425533 C3P01024 1663 aa16.56■□□□□ 0.24
SMIM27-201ENST00000425533 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
SMIM27-201ENST00000425533 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
SMIM27-201ENST00000425533 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
SMIM27-201ENST00000425533 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
SMIM27-201ENST00000425533 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
SMIM27-201ENST00000425533 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
SMIM27-201ENST00000425533 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
SMIM27-201ENST00000425533 PLCH2O75038 1416 aa16.46■□□□□ 0.23
SMIM27-201ENST00000425533 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
SMIM27-201ENST00000425533 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
SMIM27-201ENST00000425533 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
SMIM27-201ENST00000425533 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
SMIM27-201ENST00000425533 KDM5CP41229 1560 aa16.42■□□□□ 0.22
SMIM27-201ENST00000425533 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
SMIM27-201ENST00000425533 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
SMIM27-201ENST00000425533 HSPA1LP34931 641 aa16.41■□□□□ 0.22
SMIM27-201ENST00000425533 ABCA6Q8N139 1617 aa16.4■□□□□ 0.22
SMIM27-201ENST00000425533 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
SMIM27-201ENST00000425533 AGLP35573 1532 aa16.38■□□□□ 0.21
SMIM27-201ENST00000425533 CDK13Q14004 1512 aaKnown RBP16.37■□□□□ 0.21
SMIM27-201ENST00000425533 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
SMIM27-201ENST00000425533 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
SMIM27-201ENST00000425533 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
SMIM27-201ENST00000425533 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
SMIM27-201ENST00000425533 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SMIM27-201ENST00000425533 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
SMIM27-201ENST00000425533 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
SMIM27-201ENST00000425533 PIP4K2BP78356 416 aa16.34■□□□□ 0.21
SMIM27-201ENST00000425533 MYT1LQ9UL68 1186 aa16.34■□□□□ 0.21
SMIM27-201ENST00000425533 NPATQ14207 1427 aa16.34■□□□□ 0.21
SMIM27-201ENST00000425533 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
SMIM27-201ENST00000425533 MROH2AA6NES4 1674 aa16.33■□□□□ 0.2
SMIM27-201ENST00000425533 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
SMIM27-201ENST00000425533 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
SMIM27-201ENST00000425533 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
SMIM27-201ENST00000425533 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
SMIM27-201ENST00000425533 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
SMIM27-201ENST00000425533 KIF14Q15058 1648 aa16.3■□□□□ 0.2
SMIM27-201ENST00000425533 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
SMIM27-201ENST00000425533 PKD2Q13563 968 aa16.29■□□□□ 0.2
SMIM27-201ENST00000425533 TOM1O60784 492 aa16.28■□□□□ 0.2
SMIM27-201ENST00000425533 CEP170BQ9Y4F5 1589 aaPredicted RBP16.27■□□□□ 0.2
SMIM27-201ENST00000425533 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
SMIM27-201ENST00000425533 KIDINS220Q9ULH0 1771 aa16.25■□□□□ 0.19
SMIM27-201ENST00000425533 ZMYM3Q14202 1370 aa16.25■□□□□ 0.19
SMIM27-201ENST00000425533 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
SMIM27-201ENST00000425533 CPS1P31327 1500 aa16.24■□□□□ 0.19
SMIM27-201ENST00000425533 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
SMIM27-201ENST00000425533 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
SMIM27-201ENST00000425533 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
SMIM27-201ENST00000425533 ABCC1P33527 1531 aa16.21■□□□□ 0.19
SMIM27-201ENST00000425533 POLR1AO95602 1720 aaPredicted RBP16.19■□□□□ 0.18
SMIM27-201ENST00000425533 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
SMIM27-201ENST00000425533 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
SMIM27-201ENST00000425533 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
SMIM27-201ENST00000425533 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
SMIM27-201ENST00000425533 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
SMIM27-201ENST00000425533 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
SMIM27-201ENST00000425533 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
SMIM27-201ENST00000425533 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
SMIM27-201ENST00000425533 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
SMIM27-201ENST00000425533 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
SMIM27-201ENST00000425533 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
SMIM27-201ENST00000425533 CLIP1P30622 1438 aa16.13■□□□□ 0.17
SMIM27-201ENST00000425533 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
SMIM27-201ENST00000425533 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
SMIM27-201ENST00000425533 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
SMIM27-201ENST00000425533 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
SMIM27-201ENST00000425533 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
SMIM27-201ENST00000425533 FMN1Q68DA7 1419 aa16.08■□□□□ 0.16
SMIM27-201ENST00000425533 RNF17Q9BXT8 1623 aaKnown RBP16.07■□□□□ 0.16
SMIM27-201ENST00000425533 CDC42BPAQ5VT25 1732 aa16.07■□□□□ 0.16
SMIM27-201ENST00000425533 STRCP1A6NGW2 1772 aa16.05■□□□□ 0.16
SMIM27-201ENST00000425533 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
SMIM27-201ENST00000425533 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
SMIM27-201ENST00000425533 GGT6Q6P531 493 aa16.04■□□□□ 0.16
SMIM27-201ENST00000425533 POTEAQ6S8J7 498 aa16.04■□□□□ 0.16
SMIM27-201ENST00000425533 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
SMIM27-201ENST00000425533 A2MP01023 1474 aa16.03■□□□□ 0.16
SMIM27-201ENST00000425533 INO80Q9ULG1 1556 aaPredicted RBP16.03■□□□□ 0.16
SMIM27-201ENST00000425533 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
SMIM27-201ENST00000425533 SYNMO15061 1565 aa16.02■□□□□ 0.16
SMIM27-201ENST00000425533 LRRC7Q96NW7 1537 aa16.02■□□□□ 0.15
SMIM27-201ENST00000425533 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
SMIM27-201ENST00000425533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
SMIM27-201ENST00000425533 IQGAP1P46940 1657 aa16■□□□□ 0.15
SMIM27-201ENST00000425533 MED14O60244 1454 aa16■□□□□ 0.15
SMIM27-201ENST00000425533 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms