RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 PDE4AP27815 886 aa15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 EIF4G2P78344 907 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 EFCAB5A4FU69 1503 aa15.16■□□□□ 0.02
SEC61A1-202ENST00000424880 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
SEC61A1-202ENST00000424880 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
SEC61A1-202ENST00000424880 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
SEC61A1-202ENST00000424880 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
SEC61A1-202ENST00000424880 GSE1Q14687 1217 aa15.14■□□□□ 0.01
SEC61A1-202ENST00000424880 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
SEC61A1-202ENST00000424880 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 RRP7BPQ9NSQ0 103 aa15.13■□□□□ 0.01
SEC61A1-202ENST00000424880 ARXQ96QS3 562 aa15.12■□□□□ 0.01
SEC61A1-202ENST00000424880 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
SEC61A1-202ENST00000424880 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
SEC61A1-202ENST00000424880 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
SEC61A1-202ENST00000424880 USP35Q9P2H5 1018 aa15.11■□□□□ 0.01
SEC61A1-202ENST00000424880 NFKBIBQ15653 356 aa15.1■□□□□ 0.01
SEC61A1-202ENST00000424880 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
SEC61A1-202ENST00000424880 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
SEC61A1-202ENST00000424880 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0.01
SEC61A1-202ENST00000424880 FMN1Q68DA7 1419 aa15.08■□□□□ 0
SEC61A1-202ENST00000424880 PLIN1O60240 522 aa15.07■□□□□ 0
SEC61A1-202ENST00000424880 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
SEC61A1-202ENST00000424880 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
SEC61A1-202ENST00000424880 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
SEC61A1-202ENST00000424880 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
SEC61A1-202ENST00000424880 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
SEC61A1-202ENST00000424880 CFAP43Q8NDM7 1665 aa15.06■□□□□ 0
SEC61A1-202ENST00000424880 BACH2Q9BYV9 841 aa15.05■□□□□ 0
SEC61A1-202ENST00000424880 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ -0
SEC61A1-202ENST00000424880 SYNJ2O15056 1496 aa15.05■□□□□ -0
SEC61A1-202ENST00000424880 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
SEC61A1-202ENST00000424880 IQGAP2Q13576 1575 aa15.03■□□□□ -0
SEC61A1-202ENST00000424880 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
SEC61A1-202ENST00000424880 CCDC7Q96M83 1385 aa15.03■□□□□ -0
SEC61A1-202ENST00000424880 PTPRKQ15262 1439 aa15.03■□□□□ -0
SEC61A1-202ENST00000424880 KIF7Q2M1P5 1343 aa15.02■□□□□ -0
SEC61A1-202ENST00000424880 LRRIQ1Q96JM4 1722 aa15.02■□□□□ -0
SEC61A1-202ENST00000424880 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
SEC61A1-202ENST00000424880 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
SEC61A1-202ENST00000424880 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
SEC61A1-202ENST00000424880 SHROOM2Q13796 1616 aa15□□□□□ -0.01
SEC61A1-202ENST00000424880 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
SEC61A1-202ENST00000424880 GRIN2AQ12879 1464 aa15□□□□□ -0.01
SEC61A1-202ENST00000424880 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
SEC61A1-202ENST00000424880 TCERG1O14776 1098 aaKnown RBP14.98□□□□□ -0.01
SEC61A1-202ENST00000424880 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
SEC61A1-202ENST00000424880 KIAA0586Q9BVV6 1533 aa14.97□□□□□ -0.01
SEC61A1-202ENST00000424880 FBLN2P98095 1184 aa14.97□□□□□ -0.01
SEC61A1-202ENST00000424880 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
SEC61A1-202ENST00000424880 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
SEC61A1-202ENST00000424880 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
SEC61A1-202ENST00000424880 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.01
SEC61A1-202ENST00000424880 RNF123Q5XPI4 1314 aa14.96□□□□□ -0.01
SEC61A1-202ENST00000424880 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.02
SEC61A1-202ENST00000424880 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 ARID3CA6NKF2 412 aa14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 UACAQ9BZF9 1416 aa14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 DISP1Q96F81 1524 aa14.95□□□□□ -0.02
SEC61A1-202ENST00000424880 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
SEC61A1-202ENST00000424880 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
SEC61A1-202ENST00000424880 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
SEC61A1-202ENST00000424880 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
SEC61A1-202ENST00000424880 NUP160Q12769 1436 aa14.92□□□□□ -0.02
SEC61A1-202ENST00000424880 ZMYND15Q9H091 742 aa14.91□□□□□ -0.02
SEC61A1-202ENST00000424880 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
SEC61A1-202ENST00000424880 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
SEC61A1-202ENST00000424880 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
SEC61A1-202ENST00000424880 POGKQ9P215 609 aa14.9□□□□□ -0.02
SEC61A1-202ENST00000424880 KIAA0556O60303 1618 aa14.89□□□□□ -0.03
SEC61A1-202ENST00000424880 RGS3P49796 1198 aa14.89□□□□□ -0.03
SEC61A1-202ENST00000424880 MPHOSPH9Q99550 1183 aa14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 EPRSP07814 1512 aaKnown RBP14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 NAIPQ13075 1403 aa14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 FGD6Q6ZV73 1430 aa14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 C20orf194Q5TEA3 1177 aa14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 CDK13Q14004 1512 aaKnown RBP14.88□□□□□ -0.03
SEC61A1-202ENST00000424880 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
SEC61A1-202ENST00000424880 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
SEC61A1-202ENST00000424880 NAP1L5Q96NT1 182 aaPredicted RBP14.86□□□□□ -0.03
SEC61A1-202ENST00000424880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
SEC61A1-202ENST00000424880 HFM1A2PYH4 1435 aa14.85□□□□□ -0.03
SEC61A1-202ENST00000424880 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
SEC61A1-202ENST00000424880 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
SEC61A1-202ENST00000424880 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-202ENST00000424880 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.03
SEC61A1-202ENST00000424880 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
SEC61A1-202ENST00000424880 GLIPR1L2Q4G1C9 344 aa14.83□□□□□ -0.04
SEC61A1-202ENST00000424880 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-202ENST00000424880 PTPN23Q9H3S7 1636 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms