RNA–Protein interactions for RNA: ENST00000424805.1

PNMA3-201, Transcript of PNMA family member 3, humanhuman

TSL 5

Gene PNMA3, Length 3,158 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3-201ENST00000424805 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
PNMA3-201ENST00000424805 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
PNMA3-201ENST00000424805 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
PNMA3-201ENST00000424805 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
PNMA3-201ENST00000424805 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
PNMA3-201ENST00000424805 NCOA1Q15788 1441 aa18.44■□□□□ 0.54
PNMA3-201ENST00000424805 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
PNMA3-201ENST00000424805 KDM6BO15054 1643 aa18.43■□□□□ 0.54
PNMA3-201ENST00000424805 IPO9Q96P70 1041 aaKnown RBP18.43■□□□□ 0.54
PNMA3-201ENST00000424805 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
PNMA3-201ENST00000424805 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PNMA3-201ENST00000424805 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
PNMA3-201ENST00000424805 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
PNMA3-201ENST00000424805 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
PNMA3-201ENST00000424805 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
PNMA3-201ENST00000424805 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
PNMA3-201ENST00000424805 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
PNMA3-201ENST00000424805 MAGI3Q5TCQ9 1506 aa18.35■□□□□ 0.53
PNMA3-201ENST00000424805 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
PNMA3-201ENST00000424805 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
PNMA3-201ENST00000424805 IL27Q8NEV9 243 aa18.34■□□□□ 0.53
PNMA3-201ENST00000424805 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
PNMA3-201ENST00000424805 CTTNBP2Q8WZ74 1663 aa18.33■□□□□ 0.53
PNMA3-201ENST00000424805 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
PNMA3-201ENST00000424805 EXOC6Q8TAG9 804 aa18.32■□□□□ 0.52
PNMA3-201ENST00000424805 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
PNMA3-201ENST00000424805 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
PNMA3-201ENST00000424805 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
PNMA3-201ENST00000424805 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
PNMA3-201ENST00000424805 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
PNMA3-201ENST00000424805 UGGT2Q9NYU1 1516 aa18.3■□□□□ 0.52
PNMA3-201ENST00000424805 NEFMP07197 916 aa18.28■□□□□ 0.52
PNMA3-201ENST00000424805 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
PNMA3-201ENST00000424805 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PNMA3-201ENST00000424805 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
PNMA3-201ENST00000424805 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.52
PNMA3-201ENST00000424805 HECW1Q76N89 1606 aa18.27■□□□□ 0.51
PNMA3-201ENST00000424805 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
PNMA3-201ENST00000424805 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
PNMA3-201ENST00000424805 CUL7Q14999 1698 aa18.25■□□□□ 0.51
PNMA3-201ENST00000424805 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
PNMA3-201ENST00000424805 PLIN1O60240 522 aa18.23■□□□□ 0.51
PNMA3-201ENST00000424805 PRKCSHP14314 528 aaPredicted RBP18.23■□□□□ 0.51
PNMA3-201ENST00000424805 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
PNMA3-201ENST00000424805 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
PNMA3-201ENST00000424805 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
PNMA3-201ENST00000424805 PKD2Q13563 968 aa18.22■□□□□ 0.51
PNMA3-201ENST00000424805 PDE4AP27815 886 aa18.22■□□□□ 0.51
PNMA3-201ENST00000424805 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
PNMA3-201ENST00000424805 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
PNMA3-201ENST00000424805 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
PNMA3-201ENST00000424805 RCAN3Q9UKA8 241 aa18.2■□□□□ 0.5
PNMA3-201ENST00000424805 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
PNMA3-201ENST00000424805 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
PNMA3-201ENST00000424805 EPRSP07814 1512 aaKnown RBP18.19■□□□□ 0.5
PNMA3-201ENST00000424805 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
PNMA3-201ENST00000424805 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
PNMA3-201ENST00000424805 TCOF1Q13428 1488 aaKnown RBP18.18■□□□□ 0.5
PNMA3-201ENST00000424805 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
PNMA3-201ENST00000424805 DAPK1P53355 1430 aa18.17■□□□□ 0.5
PNMA3-201ENST00000424805 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
PNMA3-201ENST00000424805 ABCC5O15440 1437 aa18.15■□□□□ 0.5
PNMA3-201ENST00000424805 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
PNMA3-201ENST00000424805 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
PNMA3-201ENST00000424805 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
PNMA3-201ENST00000424805 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
PNMA3-201ENST00000424805 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
PNMA3-201ENST00000424805 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
PNMA3-201ENST00000424805 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
PNMA3-201ENST00000424805 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
PNMA3-201ENST00000424805 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
PNMA3-201ENST00000424805 KIF15Q9NS87 1388 aa18.08■□□□□ 0.49
PNMA3-201ENST00000424805 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
PNMA3-201ENST00000424805 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
PNMA3-201ENST00000424805 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
PNMA3-201ENST00000424805 BRPF3Q9ULD4 1205 aa18.06■□□□□ 0.48
PNMA3-201ENST00000424805 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
PNMA3-201ENST00000424805 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
PNMA3-201ENST00000424805 PZPP20742 1482 aa18.05■□□□□ 0.48
PNMA3-201ENST00000424805 NUP155O75694 1391 aa18.03■□□□□ 0.48
PNMA3-201ENST00000424805 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
PNMA3-201ENST00000424805 RALBP1Q15311 655 aa18.02■□□□□ 0.48
PNMA3-201ENST00000424805 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
PNMA3-201ENST00000424805 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
PNMA3-201ENST00000424805 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
PNMA3-201ENST00000424805 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
PNMA3-201ENST00000424805 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
PNMA3-201ENST00000424805 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
PNMA3-201ENST00000424805 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
PNMA3-201ENST00000424805 ROCK2O75116 1388 aaKnown RBP18■□□□□ 0.47
PNMA3-201ENST00000424805 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
PNMA3-201ENST00000424805 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
PNMA3-201ENST00000424805 RGS3P49796 1198 aa17.97■□□□□ 0.47
PNMA3-201ENST00000424805 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
PNMA3-201ENST00000424805 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
PNMA3-201ENST00000424805 EIF5BO60841 1220 aaKnown RBP17.97■□□□□ 0.47
PNMA3-201ENST00000424805 MS4A1P11836 297 aa17.97■□□□□ 0.47
PNMA3-201ENST00000424805 NFKBIBQ15653 356 aa17.97■□□□□ 0.47
PNMA3-201ENST00000424805 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
PNMA3-201ENST00000424805 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms