RNA–Protein interactions for RNA: ENST00000423424.5

FNDC3B-205, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3 BASIC

Gene FNDC3B, Length 408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-205ENST00000423424 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
FNDC3B-205ENST00000423424 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
FNDC3B-205ENST00000423424 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
FNDC3B-205ENST00000423424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
FNDC3B-205ENST00000423424 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
FNDC3B-205ENST00000423424 P3H3Q8IVL6 736 aa14.11□□□□□ -0.15
FNDC3B-205ENST00000423424 ATP10AO60312 1499 aa14.1□□□□□ -0.15
FNDC3B-205ENST00000423424 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
FNDC3B-205ENST00000423424 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
FNDC3B-205ENST00000423424 RAPGEF6Q8TEU7 1601 aa14.08□□□□□ -0.16
FNDC3B-205ENST00000423424 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
FNDC3B-205ENST00000423424 ZNF335Q9H4Z2 1342 aaPredicted RBP14.06□□□□□ -0.16
FNDC3B-205ENST00000423424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.05□□□□□ -0.161e-14■□□□□ 11
FNDC3B-205ENST00000423424 HSPA1LP34931 641 aa14.05□□□□□ -0.16
FNDC3B-205ENST00000423424 SCAPERQ9BY12 1400 aa14.05□□□□□ -0.16
FNDC3B-205ENST00000423424 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
FNDC3B-205ENST00000423424 PLEKHD1A6NEE1 506 aa14.03□□□□□ -0.16
FNDC3B-205ENST00000423424 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
FNDC3B-205ENST00000423424 C3P01024 1663 aa14.02□□□□□ -0.16
FNDC3B-205ENST00000423424 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.16
FNDC3B-205ENST00000423424 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
FNDC3B-205ENST00000423424 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
FNDC3B-205ENST00000423424 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
FNDC3B-205ENST00000423424 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
FNDC3B-205ENST00000423424 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
FNDC3B-205ENST00000423424 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
FNDC3B-205ENST00000423424 PLCH2O75038 1416 aa13.96□□□□□ -0.18
FNDC3B-205ENST00000423424 ESF1Q9H501 851 aaKnown RBP13.94□□□□□ -0.18
FNDC3B-205ENST00000423424 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
FNDC3B-205ENST00000423424 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
FNDC3B-205ENST00000423424 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
FNDC3B-205ENST00000423424 TOM1O60784 492 aa13.92□□□□□ -0.18
FNDC3B-205ENST00000423424 PKD2Q13563 968 aa13.91□□□□□ -0.18
FNDC3B-205ENST00000423424 KDM5CP41229 1560 aa13.91□□□□□ -0.18
FNDC3B-205ENST00000423424 AGLP35573 1532 aa13.9□□□□□ -0.18
FNDC3B-205ENST00000423424 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
FNDC3B-205ENST00000423424 NPATQ14207 1427 aa13.9□□□□□ -0.19
FNDC3B-205ENST00000423424 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.19
FNDC3B-205ENST00000423424 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
FNDC3B-205ENST00000423424 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
FNDC3B-205ENST00000423424 EFCAB2Q5VUJ9 269 aa13.89□□□□□ -0.19
FNDC3B-205ENST00000423424 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
FNDC3B-205ENST00000423424 ABCA6Q8N139 1617 aa13.87□□□□□ -0.19
FNDC3B-205ENST00000423424 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
FNDC3B-205ENST00000423424 RGS17Q9UGC6 210 aaPredicted RBP13.85□□□□□ -0.19
FNDC3B-205ENST00000423424 MLH3Q9UHC1 1453 aa13.84□□□□□ -0.19
FNDC3B-205ENST00000423424 CPS1P31327 1500 aa13.84□□□□□ -0.19
FNDC3B-205ENST00000423424 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
FNDC3B-205ENST00000423424 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
FNDC3B-205ENST00000423424 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
FNDC3B-205ENST00000423424 ZMYM3Q14202 1370 aa13.83□□□□□ -0.2
FNDC3B-205ENST00000423424 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
FNDC3B-205ENST00000423424 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
FNDC3B-205ENST00000423424 CEP170BQ9Y4F5 1589 aaPredicted RBP13.82□□□□□ -0.2
FNDC3B-205ENST00000423424 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
FNDC3B-205ENST00000423424 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
FNDC3B-205ENST00000423424 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
FNDC3B-205ENST00000423424 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
FNDC3B-205ENST00000423424 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
FNDC3B-205ENST00000423424 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
FNDC3B-205ENST00000423424 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
FNDC3B-205ENST00000423424 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
FNDC3B-205ENST00000423424 KIF14Q15058 1648 aa13.75□□□□□ -0.21
FNDC3B-205ENST00000423424 POTEAQ6S8J7 498 aa13.74□□□□□ -0.21
FNDC3B-205ENST00000423424 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
FNDC3B-205ENST00000423424 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
FNDC3B-205ENST00000423424 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
FNDC3B-205ENST00000423424 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
FNDC3B-205ENST00000423424 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
FNDC3B-205ENST00000423424 ABCC1P33527 1531 aa13.71□□□□□ -0.21
FNDC3B-205ENST00000423424 A2ML1A8K2U0 1454 aa13.71□□□□□ -0.21
FNDC3B-205ENST00000423424 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
FNDC3B-205ENST00000423424 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
FNDC3B-205ENST00000423424 ITSN2Q9NZM3 1697 aa13.68□□□□□ -0.22
FNDC3B-205ENST00000423424 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
FNDC3B-205ENST00000423424 TROQ12816 1431 aaPredicted RBP13.67□□□□□ -0.22
FNDC3B-205ENST00000423424 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
FNDC3B-205ENST00000423424 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
FNDC3B-205ENST00000423424 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
FNDC3B-205ENST00000423424 ATP1B4Q9UN42 357 aaPredicted RBP13.66□□□□□ -0.22
FNDC3B-205ENST00000423424 RNF17Q9BXT8 1623 aaKnown RBP13.65□□□□□ -0.22
FNDC3B-205ENST00000423424 CLIP1P30622 1438 aa13.64□□□□□ -0.23
FNDC3B-205ENST00000423424 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
FNDC3B-205ENST00000423424 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
FNDC3B-205ENST00000423424 GGT6Q6P531 493 aa13.63□□□□□ -0.23
FNDC3B-205ENST00000423424 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
FNDC3B-205ENST00000423424 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
FNDC3B-205ENST00000423424 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
FNDC3B-205ENST00000423424 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
FNDC3B-205ENST00000423424 MED14O60244 1454 aa13.61□□□□□ -0.23
FNDC3B-205ENST00000423424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.6□□□□□ -0.234e-15■□□□□ 8.2
FNDC3B-205ENST00000423424 SYNMO15061 1565 aa13.6□□□□□ -0.23
FNDC3B-205ENST00000423424 A2MP01023 1474 aa13.6□□□□□ -0.23
FNDC3B-205ENST00000423424 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
FNDC3B-205ENST00000423424 STRCP1A6NGW2 1772 aa13.59□□□□□ -0.23
FNDC3B-205ENST00000423424 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
FNDC3B-205ENST00000423424 TNRQ92752 1358 aa13.58□□□□□ -0.23
FNDC3B-205ENST00000423424 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
FNDC3B-205ENST00000423424 DEPDC5O75140 1603 aa13.58□□□□□ -0.24
FNDC3B-205ENST00000423424 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms