RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 TAF7LQ5H9L4 462 aa12.54□□□□□ -0.4
PAPD4-202ENST00000423041 ANP32CO43423 234 aa12.53□□□□□ -0.4
PAPD4-202ENST00000423041 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
PAPD4-202ENST00000423041 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
PAPD4-202ENST00000423041 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
PAPD4-202ENST00000423041 FHOD3Q2V2M9 1422 aa12.48□□□□□ -0.41
PAPD4-202ENST00000423041 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
PAPD4-202ENST00000423041 CHD1O14646 1710 aa12.47□□□□□ -0.41
PAPD4-202ENST00000423041 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
PAPD4-202ENST00000423041 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.41
PAPD4-202ENST00000423041 KIAA0586Q9BVV6 1533 aa12.45□□□□□ -0.42
PAPD4-202ENST00000423041 RGS3P49796 1198 aa12.45□□□□□ -0.42
PAPD4-202ENST00000423041 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
PAPD4-202ENST00000423041 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
PAPD4-202ENST00000423041 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
PAPD4-202ENST00000423041 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
PAPD4-202ENST00000423041 NFKBIBQ15653 356 aa12.44□□□□□ -0.42
PAPD4-202ENST00000423041 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
PAPD4-202ENST00000423041 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
PAPD4-202ENST00000423041 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
PAPD4-202ENST00000423041 BBXQ8WY36 941 aaPredicted RBP12.42□□□□□ -0.42
PAPD4-202ENST00000423041 NUP160Q12769 1436 aa12.42□□□□□ -0.42
PAPD4-202ENST00000423041 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
PAPD4-202ENST00000423041 ARHGAP35Q9NRY4 1499 aa12.42□□□□□ -0.42
PAPD4-202ENST00000423041 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
PAPD4-202ENST00000423041 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
PAPD4-202ENST00000423041 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-202ENST00000423041 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
PAPD4-202ENST00000423041 CYB5RLQ6IPT4 315 aa12.38□□□□□ -0.43
PAPD4-202ENST00000423041 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
PAPD4-202ENST00000423041 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
PAPD4-202ENST00000423041 PTPRGP23470 1445 aa12.35□□□□□ -0.43
PAPD4-202ENST00000423041 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
PAPD4-202ENST00000423041 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
PAPD4-202ENST00000423041 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
PAPD4-202ENST00000423041 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
PAPD4-202ENST00000423041 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
PAPD4-202ENST00000423041 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
PAPD4-202ENST00000423041 CLCN1P35523 988 aa12.32□□□□□ -0.44
PAPD4-202ENST00000423041 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
PAPD4-202ENST00000423041 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
PAPD4-202ENST00000423041 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
PAPD4-202ENST00000423041 DISP1Q96F81 1524 aa12.31□□□□□ -0.44
PAPD4-202ENST00000423041 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
PAPD4-202ENST00000423041 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
PAPD4-202ENST00000423041 UGGT2Q9NYU1 1516 aa12.3□□□□□ -0.44
PAPD4-202ENST00000423041 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
PAPD4-202ENST00000423041 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
PAPD4-202ENST00000423041 PLB1Q6P1J6 1458 aa12.29□□□□□ -0.44
PAPD4-202ENST00000423041 PDE4AP27815 886 aa12.28□□□□□ -0.44
PAPD4-202ENST00000423041 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
PAPD4-202ENST00000423041 IPO4Q8TEX9 1081 aaKnown RBP12.28□□□□□ -0.44
PAPD4-202ENST00000423041 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
PAPD4-202ENST00000423041 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
PAPD4-202ENST00000423041 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.44
PAPD4-202ENST00000423041 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.44
PAPD4-202ENST00000423041 STAC3Q96MF2 364 aa12.27□□□□□ -0.44
PAPD4-202ENST00000423041 KIAA0556O60303 1618 aa12.27□□□□□ -0.45
PAPD4-202ENST00000423041 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
PAPD4-202ENST00000423041 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
PAPD4-202ENST00000423041 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
PAPD4-202ENST00000423041 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
PAPD4-202ENST00000423041 ARXQ96QS3 562 aa12.25□□□□□ -0.45
PAPD4-202ENST00000423041 TPM2P07951 284 aa12.24□□□□□ -0.45
PAPD4-202ENST00000423041 BACH2Q9BYV9 841 aa12.24□□□□□ -0.45
PAPD4-202ENST00000423041 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
PAPD4-202ENST00000423041 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
PAPD4-202ENST00000423041 PLEKHD1A6NEE1 506 aa12.23□□□□□ -0.45
PAPD4-202ENST00000423041 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
PAPD4-202ENST00000423041 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
PAPD4-202ENST00000423041 ZHX1Q9UKY1 873 aaPredicted RBP12.21□□□□□ -0.46
PAPD4-202ENST00000423041 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.46
PAPD4-202ENST00000423041 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
PAPD4-202ENST00000423041 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
PAPD4-202ENST00000423041 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
PAPD4-202ENST00000423041 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
PAPD4-202ENST00000423041 FAM50AQ14320 339 aaKnown RBP12.18□□□□□ -0.46
PAPD4-202ENST00000423041 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
PAPD4-202ENST00000423041 ZBED9Q6R2W3 1325 aa12.17□□□□□ -0.46
PAPD4-202ENST00000423041 FYCO1Q9BQS8 1478 aa12.17□□□□□ -0.46
PAPD4-202ENST00000423041 MS4A1P11836 297 aa12.17□□□□□ -0.46
PAPD4-202ENST00000423041 POGKQ9P215 609 aa12.17□□□□□ -0.46
PAPD4-202ENST00000423041 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
PAPD4-202ENST00000423041 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
PAPD4-202ENST00000423041 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.46
PAPD4-202ENST00000423041 EPRSP07814 1512 aaKnown RBP12.15□□□□□ -0.46
PAPD4-202ENST00000423041 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
PAPD4-202ENST00000423041 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.47
PAPD4-202ENST00000423041 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
PAPD4-202ENST00000423041 RAPGEF6Q8TEU7 1601 aa12.14□□□□□ -0.47
PAPD4-202ENST00000423041 MAP7D2Q96T17 732 aa12.13□□□□□ -0.47
PAPD4-202ENST00000423041 AKNAQ7Z591 1439 aa12.13□□□□□ -0.47
PAPD4-202ENST00000423041 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
PAPD4-202ENST00000423041 HECW1Q76N89 1606 aa12.12□□□□□ -0.47
PAPD4-202ENST00000423041 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
PAPD4-202ENST00000423041 ATP10BO94823 1461 aa12.11□□□□□ -0.47
PAPD4-202ENST00000423041 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
PAPD4-202ENST00000423041 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
PAPD4-202ENST00000423041 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
PAPD4-202ENST00000423041 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.479e-16■■■■■ 48.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms