RNA–Protein interactions for RNA: ENST00000422959.6

PHTF2-206, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHTF2, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-206ENST00000422959 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
PHTF2-206ENST00000422959 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
PHTF2-206ENST00000422959 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
PHTF2-206ENST00000422959 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
PHTF2-206ENST00000422959 KDM6BO15054 1643 aa19.78■□□□□ 0.76
PHTF2-206ENST00000422959 KIF7Q2M1P5 1343 aa19.78■□□□□ 0.76
PHTF2-206ENST00000422959 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.76
PHTF2-206ENST00000422959 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.76
PHTF2-206ENST00000422959 CTTNBP2Q8WZ74 1663 aa19.77■□□□□ 0.75
PHTF2-206ENST00000422959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.76■□□□□ 0.75
PHTF2-206ENST00000422959 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
PHTF2-206ENST00000422959 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
PHTF2-206ENST00000422959 SUPT6HQ7KZ85 1726 aaKnown RBP19.73■□□□□ 0.75
PHTF2-206ENST00000422959 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
PHTF2-206ENST00000422959 NUP155O75694 1391 aa19.73■□□□□ 0.75
PHTF2-206ENST00000422959 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
PHTF2-206ENST00000422959 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
PHTF2-206ENST00000422959 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
PHTF2-206ENST00000422959 ABCC5O15440 1437 aa19.7■□□□□ 0.74
PHTF2-206ENST00000422959 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
PHTF2-206ENST00000422959 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
PHTF2-206ENST00000422959 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
PHTF2-206ENST00000422959 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
PHTF2-206ENST00000422959 DAPK1P53355 1430 aa19.68■□□□□ 0.74
PHTF2-206ENST00000422959 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
PHTF2-206ENST00000422959 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
PHTF2-206ENST00000422959 ANKRD30BQ9BXX2 1392 aa19.65■□□□□ 0.74
PHTF2-206ENST00000422959 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
PHTF2-206ENST00000422959 ANP32EQ9BTT0 268 aa19.65■□□□□ 0.74
PHTF2-206ENST00000422959 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
PHTF2-206ENST00000422959 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
PHTF2-206ENST00000422959 USP47Q96K76 1375 aa19.61■□□□□ 0.73
PHTF2-206ENST00000422959 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
PHTF2-206ENST00000422959 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
PHTF2-206ENST00000422959 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
PHTF2-206ENST00000422959 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
PHTF2-206ENST00000422959 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
PHTF2-206ENST00000422959 MIA2Q96PC5 1412 aa19.56■□□□□ 0.72
PHTF2-206ENST00000422959 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
PHTF2-206ENST00000422959 MYT1Q01538 1121 aa19.55■□□□□ 0.72
PHTF2-206ENST00000422959 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
PHTF2-206ENST00000422959 KIAA0586Q9BVV6 1533 aa19.54■□□□□ 0.72
PHTF2-206ENST00000422959 DISP1Q96F81 1524 aa19.54■□□□□ 0.72
PHTF2-206ENST00000422959 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
PHTF2-206ENST00000422959 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
PHTF2-206ENST00000422959 ANKRD50Q9ULJ7 1429 aa19.53■□□□□ 0.72
PHTF2-206ENST00000422959 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
PHTF2-206ENST00000422959 AKNAQ7Z591 1439 aa19.52■□□□□ 0.72
PHTF2-206ENST00000422959 WDR62O43379 1518 aa19.52■□□□□ 0.72
PHTF2-206ENST00000422959 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
PHTF2-206ENST00000422959 MSH5O43196 834 aa19.52■□□□□ 0.71
PHTF2-206ENST00000422959 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
PHTF2-206ENST00000422959 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
PHTF2-206ENST00000422959 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
PHTF2-206ENST00000422959 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
PHTF2-206ENST00000422959 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
PHTF2-206ENST00000422959 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
PHTF2-206ENST00000422959 CAMSAP2Q08AD1 1489 aa19.49■□□□□ 0.71
PHTF2-206ENST00000422959 NBR1Q14596 966 aa19.48■□□□□ 0.71
PHTF2-206ENST00000422959 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
PHTF2-206ENST00000422959 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
PHTF2-206ENST00000422959 ROCK2O75116 1388 aaKnown RBP19.48■□□□□ 0.71
PHTF2-206ENST00000422959 KIF15Q9NS87 1388 aa19.46■□□□□ 0.71
PHTF2-206ENST00000422959 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
PHTF2-206ENST00000422959 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
PHTF2-206ENST00000422959 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
PHTF2-206ENST00000422959 PTPRGP23470 1445 aa19.44■□□□□ 0.7
PHTF2-206ENST00000422959 PLIN1O60240 522 aa19.44■□□□□ 0.7
PHTF2-206ENST00000422959 CHGAP10645 457 aaKnown RBP19.43■□□□□ 0.7
PHTF2-206ENST00000422959 SKAP1Q86WV1 359 aa19.42■□□□□ 0.7
PHTF2-206ENST00000422959 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
PHTF2-206ENST00000422959 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
PHTF2-206ENST00000422959 ROCK1Q13464 1354 aa19.41■□□□□ 0.7
PHTF2-206ENST00000422959 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
PHTF2-206ENST00000422959 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
PHTF2-206ENST00000422959 PZPP20742 1482 aa19.4■□□□□ 0.7
PHTF2-206ENST00000422959 KIF14Q15058 1648 aa19.39■□□□□ 0.7
PHTF2-206ENST00000422959 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
PHTF2-206ENST00000422959 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
PHTF2-206ENST00000422959 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
PHTF2-206ENST00000422959 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
PHTF2-206ENST00000422959 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
PHTF2-206ENST00000422959 PANK3Q9H999 370 aa19.36■□□□□ 0.69
PHTF2-206ENST00000422959 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
PHTF2-206ENST00000422959 ATP10BO94823 1461 aa19.34■□□□□ 0.69
PHTF2-206ENST00000422959 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
PHTF2-206ENST00000422959 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.69
PHTF2-206ENST00000422959 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
PHTF2-206ENST00000422959 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
PHTF2-206ENST00000422959 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
PHTF2-206ENST00000422959 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
PHTF2-206ENST00000422959 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
PHTF2-206ENST00000422959 NUTM2DQ5VT03 806 aaPredicted RBP19.3■□□□□ 0.68
PHTF2-206ENST00000422959 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
PHTF2-206ENST00000422959 CCDC146Q8IYE0 955 aa19.27■□□□□ 0.68
PHTF2-206ENST00000422959 DNMT1P26358 1616 aaKnown RBP19.27■□□□□ 0.68
PHTF2-206ENST00000422959 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.67
PHTF2-206ENST00000422959 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
PHTF2-206ENST00000422959 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
PHTF2-206ENST00000422959 RCAN3Q9UKA8 241 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms