RNA–Protein interactions for RNA: ENST00000421351.3

PERP-201, Transcript of PERP, TP53 apoptosis effector, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PERP, Length 4,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERP-201ENST00000421351 HDGFP51858 240 aaKnown RBP17.64■□□□□ 0.42
PERP-201ENST00000421351 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
PERP-201ENST00000421351 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
PERP-201ENST00000421351 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
PERP-201ENST00000421351 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
PERP-201ENST00000421351 ANP32AP39687 249 aaKnown RBP17.59■□□□□ 0.41
PERP-201ENST00000421351 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.41
PERP-201ENST00000421351 GRIN2BQ13224 1484 aa17.57■□□□□ 0.4
PERP-201ENST00000421351 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
PERP-201ENST00000421351 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
PERP-201ENST00000421351 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
PERP-201ENST00000421351 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
PERP-201ENST00000421351 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
PERP-201ENST00000421351 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
PERP-201ENST00000421351 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
PERP-201ENST00000421351 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
PERP-201ENST00000421351 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
PERP-201ENST00000421351 MYT1Q01538 1121 aa17.53■□□□□ 0.4
PERP-201ENST00000421351 ARXQ96QS3 562 aa17.53■□□□□ 0.4
PERP-201ENST00000421351 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
PERP-201ENST00000421351 CUX1P39880 1505 aa17.5■□□□□ 0.39
PERP-201ENST00000421351 NUTM2FA1L443 756 aa17.49■□□□□ 0.39
PERP-201ENST00000421351 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
PERP-201ENST00000421351 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
PERP-201ENST00000421351 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
PERP-201ENST00000421351 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
PERP-201ENST00000421351 KIF21BO75037 1637 aa17.47■□□□□ 0.39
PERP-201ENST00000421351 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
PERP-201ENST00000421351 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
PERP-201ENST00000421351 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
PERP-201ENST00000421351 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
PERP-201ENST00000421351 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
PERP-201ENST00000421351 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
PERP-201ENST00000421351 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
PERP-201ENST00000421351 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
PERP-201ENST00000421351 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
PERP-201ENST00000421351 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
PERP-201ENST00000421351 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
PERP-201ENST00000421351 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
PERP-201ENST00000421351 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
PERP-201ENST00000421351 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
PERP-201ENST00000421351 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
PERP-201ENST00000421351 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
PERP-201ENST00000421351 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
PERP-201ENST00000421351 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.38
PERP-201ENST00000421351 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
PERP-201ENST00000421351 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
PERP-201ENST00000421351 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
PERP-201ENST00000421351 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
PERP-201ENST00000421351 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
PERP-201ENST00000421351 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
PERP-201ENST00000421351 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
PERP-201ENST00000421351 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
PERP-201ENST00000421351 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.36
PERP-201ENST00000421351 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
PERP-201ENST00000421351 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
PERP-201ENST00000421351 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
PERP-201ENST00000421351 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
PERP-201ENST00000421351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.31■□□□□ 0.36
PERP-201ENST00000421351 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
PERP-201ENST00000421351 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
PERP-201ENST00000421351 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
PERP-201ENST00000421351 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
PERP-201ENST00000421351 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
PERP-201ENST00000421351 CSB-PGBD3P0DP91 1061 aa17.27■□□□□ 0.35
PERP-201ENST00000421351 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.35
PERP-201ENST00000421351 RGS3P49796 1198 aa17.26■□□□□ 0.35
PERP-201ENST00000421351 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
PERP-201ENST00000421351 RALBP1Q15311 655 aa17.25■□□□□ 0.35
PERP-201ENST00000421351 PANK3Q9H999 370 aa17.25■□□□□ 0.35
PERP-201ENST00000421351 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
PERP-201ENST00000421351 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
PERP-201ENST00000421351 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
PERP-201ENST00000421351 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
PERP-201ENST00000421351 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
PERP-201ENST00000421351 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
PERP-201ENST00000421351 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
PERP-201ENST00000421351 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
PERP-201ENST00000421351 USP47Q96K76 1375 aa17.21■□□□□ 0.35
PERP-201ENST00000421351 NLRP13Q86W25 1043 aa17.2■□□□□ 0.34
PERP-201ENST00000421351 NPHP1O15259 732 aa17.19■□□□□ 0.34
PERP-201ENST00000421351 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
PERP-201ENST00000421351 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
PERP-201ENST00000421351 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
PERP-201ENST00000421351 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
PERP-201ENST00000421351 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
PERP-201ENST00000421351 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
PERP-201ENST00000421351 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
PERP-201ENST00000421351 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
PERP-201ENST00000421351 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
PERP-201ENST00000421351 AMPHP49418 695 aa17.17■□□□□ 0.34
PERP-201ENST00000421351 NBR1Q14596 966 aa17.16■□□□□ 0.34
PERP-201ENST00000421351 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
PERP-201ENST00000421351 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
PERP-201ENST00000421351 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
PERP-201ENST00000421351 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
PERP-201ENST00000421351 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
PERP-201ENST00000421351 RRP7AQ9Y3A4 280 aaKnown RBP17.13■□□□□ 0.33
PERP-201ENST00000421351 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
PERP-201ENST00000421351 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms