RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.12
TRIM39-206ENST00000420746 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
TRIM39-206ENST00000420746 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
TRIM39-206ENST00000420746 ATP10AO60312 1499 aa15.81■□□□□ 0.12
TRIM39-206ENST00000420746 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
TRIM39-206ENST00000420746 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-206ENST00000420746 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
TRIM39-206ENST00000420746 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
TRIM39-206ENST00000420746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-206ENST00000420746 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
TRIM39-206ENST00000420746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.11
TRIM39-206ENST00000420746 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-206ENST00000420746 UBAP1LF5GYI3 381 aa15.76■□□□□ 0.11
TRIM39-206ENST00000420746 PRXQ9BXM0 1461 aa15.75■□□□□ 0.11
TRIM39-206ENST00000420746 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
TRIM39-206ENST00000420746 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
TRIM39-206ENST00000420746 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
TRIM39-206ENST00000420746 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
TRIM39-206ENST00000420746 P3H3Q8IVL6 736 aa15.71■□□□□ 0.11
TRIM39-206ENST00000420746 PLCH2O75038 1416 aa15.69■□□□□ 0.1
TRIM39-206ENST00000420746 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
TRIM39-206ENST00000420746 C3P01024 1663 aa15.68■□□□□ 0.1
TRIM39-206ENST00000420746 ZNF335Q9H4Z2 1342 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-206ENST00000420746 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
TRIM39-206ENST00000420746 AGLP35573 1532 aa15.65■□□□□ 0.1
TRIM39-206ENST00000420746 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
TRIM39-206ENST00000420746 NPATQ14207 1427 aa15.64■□□□□ 0.09
TRIM39-206ENST00000420746 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
TRIM39-206ENST00000420746 KDM5CP41229 1560 aa15.63■□□□□ 0.09
TRIM39-206ENST00000420746 HSPA1LP34931 641 aa15.63■□□□□ 0.09
TRIM39-206ENST00000420746 PLA2R1Q13018 1463 aa15.63■□□□□ 0.09
TRIM39-206ENST00000420746 PKD2Q13563 968 aa15.61■□□□□ 0.09
TRIM39-206ENST00000420746 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-206ENST00000420746 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
TRIM39-206ENST00000420746 DIP2CQ9Y2E4 1556 aa15.61■□□□□ 0.09
TRIM39-206ENST00000420746 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
TRIM39-206ENST00000420746 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
TRIM39-206ENST00000420746 TOM1O60784 492 aa15.57■□□□□ 0.08
TRIM39-206ENST00000420746 MLH3Q9UHC1 1453 aa15.57■□□□□ 0.08
TRIM39-206ENST00000420746 NCKAP5LQ9HCH0 1330 aa15.56■□□□□ 0.08
TRIM39-206ENST00000420746 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
TRIM39-206ENST00000420746 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
TRIM39-206ENST00000420746 CPS1P31327 1500 aa15.53■□□□□ 0.08
TRIM39-206ENST00000420746 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
TRIM39-206ENST00000420746 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
TRIM39-206ENST00000420746 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
TRIM39-206ENST00000420746 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
TRIM39-206ENST00000420746 PPP6R1Q9UPN7 881 aa15.52■□□□□ 0.08
TRIM39-206ENST00000420746 PIP4K2BP78356 416 aa15.51■□□□□ 0.07
TRIM39-206ENST00000420746 PTPRKQ15262 1439 aa15.49■□□□□ 0.07
TRIM39-206ENST00000420746 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
TRIM39-206ENST00000420746 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
TRIM39-206ENST00000420746 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
TRIM39-206ENST00000420746 CEP170BQ9Y4F5 1589 aaPredicted RBP15.48■□□□□ 0.07
TRIM39-206ENST00000420746 MYO3AQ8NEV4 1616 aa15.47■□□□□ 0.07
TRIM39-206ENST00000420746 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
TRIM39-206ENST00000420746 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
TRIM39-206ENST00000420746 KIF14Q15058 1648 aa15.43■□□□□ 0.06
TRIM39-206ENST00000420746 CDK11AQ9UQ88 783 aaPredicted RBP15.42■□□□□ 0.06
TRIM39-206ENST00000420746 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
TRIM39-206ENST00000420746 SUPT6HQ7KZ85 1726 aaKnown RBP15.41■□□□□ 0.06
TRIM39-206ENST00000420746 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-206ENST00000420746 ABCC1P33527 1531 aa15.41■□□□□ 0.06
TRIM39-206ENST00000420746 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
TRIM39-206ENST00000420746 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-206ENST00000420746 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
TRIM39-206ENST00000420746 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
TRIM39-206ENST00000420746 CLIP1P30622 1438 aa15.36■□□□□ 0.05
TRIM39-206ENST00000420746 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
TRIM39-206ENST00000420746 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
TRIM39-206ENST00000420746 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
TRIM39-206ENST00000420746 VWDEQ8N2E2 1590 aa15.35■□□□□ 0.05
TRIM39-206ENST00000420746 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-206ENST00000420746 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-206ENST00000420746 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.04
TRIM39-206ENST00000420746 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.04
TRIM39-206ENST00000420746 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
TRIM39-206ENST00000420746 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
TRIM39-206ENST00000420746 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
TRIM39-206ENST00000420746 RNF17Q9BXT8 1623 aaKnown RBP15.31■□□□□ 0.04
TRIM39-206ENST00000420746 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
TRIM39-206ENST00000420746 MED14O60244 1454 aa15.29■□□□□ 0.04
TRIM39-206ENST00000420746 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
TRIM39-206ENST00000420746 SYNMO15061 1565 aa15.28■□□□□ 0.04
TRIM39-206ENST00000420746 ANKLE2Q86XL3 938 aa15.27■□□□□ 0.04
TRIM39-206ENST00000420746 DEPDC5O75140 1603 aa15.26■□□□□ 0.03
TRIM39-206ENST00000420746 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
TRIM39-206ENST00000420746 A2MP01023 1474 aa15.26■□□□□ 0.03
TRIM39-206ENST00000420746 EEA1Q15075 1411 aa15.26■□□□□ 0.03
TRIM39-206ENST00000420746 SPAG9O60271 1321 aaKnown RBP15.25■□□□□ 0.03
TRIM39-206ENST00000420746 NPHP4O75161 1426 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-206ENST00000420746 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
TRIM39-206ENST00000420746 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-206ENST00000420746 TNRQ92752 1358 aa15.23■□□□□ 0.03
TRIM39-206ENST00000420746 GGT6Q6P531 493 aa15.22■□□□□ 0.03
TRIM39-206ENST00000420746 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-206ENST00000420746 THEMISQ8N1K5 641 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-206ENST00000420746 FAM135AQ9P2D6 1515 aa15.2■□□□□ 0.02
TRIM39-206ENST00000420746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRIM39-206ENST00000420746 NLRP1Q9C000 1473 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms