RNA–Protein interactions for RNA: ENST00000419210.1

COPS6-203, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-203ENST00000419210 HECW1Q76N89 1606 aa30.76■■■□□ 2.51
COPS6-203ENST00000419210 PLEKHD1A6NEE1 506 aa30.75■■■□□ 2.51
COPS6-203ENST00000419210 ARHGEF12Q9NZN5 1544 aa30.7■■■□□ 2.51
COPS6-203ENST00000419210 STRCQ7RTU9 1775 aa30.69■■■□□ 2.5
COPS6-203ENST00000419210 DMRT2Q9Y5R5 561 aa30.68■■■□□ 2.5
COPS6-203ENST00000419210 C9orf84Q5VXU9 1444 aa30.63■■■□□ 2.49
COPS6-203ENST00000419210 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
COPS6-203ENST00000419210 UHRF1BP1Q6BDS2 1440 aa30.61■■■□□ 2.49
COPS6-203ENST00000419210 SCAPERQ9BY12 1400 aa30.61■■■□□ 2.49
COPS6-203ENST00000419210 ATP10AO60312 1499 aa30.61■■■□□ 2.49
COPS6-203ENST00000419210 CEBPAP49715 358 aaPredicted RBP30.58■■■□□ 2.49
COPS6-203ENST00000419210 MYO5CQ9NQX4 1742 aa30.51■■■□□ 2.47
COPS6-203ENST00000419210 PLCH2O75038 1416 aa30.51■■■□□ 2.47
COPS6-203ENST00000419210 CDK13Q14004 1512 aaKnown RBP30.5■■■□□ 2.47
COPS6-203ENST00000419210 PTPRTO14522 1441 aa30.48■■■□□ 2.47
COPS6-203ENST00000419210 CSRNP3Q8WYN3 585 aa30.48■■■□□ 2.47
COPS6-203ENST00000419210 SETD1BQ9UPS6 1966 aaKnown RBP30.47■■■□□ 2.47
COPS6-203ENST00000419210 C3P01024 1663 aa30.44■■■□□ 2.46
COPS6-203ENST00000419210 ZNF518AQ6AHZ1 1483 aa30.44■■■□□ 2.46
COPS6-203ENST00000419210 IQSEC2Q5JU85 1478 aa30.43■■■□□ 2.46
COPS6-203ENST00000419210 LTBP4Q8N2S1 1624 aa30.42■■■□□ 2.46
COPS6-203ENST00000419210 EFCAB2Q5VUJ9 269 aa30.4■■■□□ 2.46
COPS6-203ENST00000419210 KDM5CP41229 1560 aa30.38■■■□□ 2.45
COPS6-203ENST00000419210 MYT1LQ9UL68 1186 aa30.38■■■□□ 2.45
COPS6-203ENST00000419210 DIP2CQ9Y2E4 1556 aa30.37■■■□□ 2.45
COPS6-203ENST00000419210 REREQ9P2R6 1566 aa30.35■■■□□ 2.45
COPS6-203ENST00000419210 ARHGAP5Q13017 1502 aa30.33■■■□□ 2.45
COPS6-203ENST00000419210 KIF14Q15058 1648 aa30.33■■■□□ 2.45
COPS6-203ENST00000419210 ESF1Q9H501 851 aaKnown RBP30.32■■■□□ 2.44
COPS6-203ENST00000419210 ABCA6Q8N139 1617 aa30.31■■■□□ 2.44
COPS6-203ENST00000419210 NCOA1Q15788 1441 aa30.29■■■□□ 2.44
COPS6-203ENST00000419210 AFAP1Q8N556 730 aa30.27■■■□□ 2.44
COPS6-203ENST00000419210 TRAPPC8Q9Y2L5 1435 aa30.27■■■□□ 2.44
COPS6-203ENST00000419210 ATP1B4Q9UN42 357 aaPredicted RBP30.26■■■□□ 2.43
COPS6-203ENST00000419210 EEA1Q15075 1411 aa30.25■■■□□ 2.43
COPS6-203ENST00000419210 AGLP35573 1532 aa30.22■■■□□ 2.43
COPS6-203ENST00000419210 CDK11AQ9UQ88 783 aaPredicted RBP30.22■■■□□ 2.43
COPS6-203ENST00000419210 CAMSAP1Q5T5Y3 1602 aa30.22■■■□□ 2.43
COPS6-203ENST00000419210 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
COPS6-203ENST00000419210 CNTLNQ9NXG0 1405 aa30.18■■■□□ 2.42
COPS6-203ENST00000419210 CLIP1P30622 1438 aa30.17■■■□□ 2.42
COPS6-203ENST00000419210 FMN1Q68DA7 1419 aa30.16■■■□□ 2.42
COPS6-203ENST00000419210 UBAP1LF5GYI3 381 aa30.16■■■□□ 2.42
COPS6-203ENST00000419210 CDC42BPBQ9Y5S2 1711 aa30.16■■■□□ 2.42
COPS6-203ENST00000419210 TROQ12816 1431 aaPredicted RBP30.15■■■□□ 2.42
COPS6-203ENST00000419210 MROH2AA6NES4 1674 aa30.14■■■□□ 2.41
COPS6-203ENST00000419210 ITSN2Q9NZM3 1697 aa30.13■■■□□ 2.41
COPS6-203ENST00000419210 ABCC1P33527 1531 aa30.12■■■□□ 2.41
COPS6-203ENST00000419210 SUPT6HQ7KZ85 1726 aaKnown RBP30.11■■■□□ 2.41
COPS6-203ENST00000419210 PREX2Q70Z35 1606 aa30.11■■■□□ 2.41
COPS6-203ENST00000419210 ZNF335Q9H4Z2 1342 aaPredicted RBP30.1■■■□□ 2.41
COPS6-203ENST00000419210 NPATQ14207 1427 aa30.1■■■□□ 2.41
COPS6-203ENST00000419210 KIDINS220Q9ULH0 1771 aa30.08■■■□□ 2.41
COPS6-203ENST00000419210 ZNF142P52746 1687 aaPredicted RBP30.05■■■□□ 2.4
COPS6-203ENST00000419210 NCKAP5LQ9HCH0 1330 aa30.05■■■□□ 2.4
COPS6-203ENST00000419210 LRRIQ1Q96JM4 1722 aa30.05■■■□□ 2.4
COPS6-203ENST00000419210 MYO3AQ8NEV4 1616 aa30.04■■■□□ 2.4
COPS6-203ENST00000419210 MED1Q15648 1581 aaPredicted RBP30.02■■■□□ 2.4
COPS6-203ENST00000419210 PLA2R1Q13018 1463 aa29.99■■■□□ 2.39
COPS6-203ENST00000419210 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
COPS6-203ENST00000419210 CLTCQ00610 1675 aaKnown RBP29.98■■■□□ 2.39
COPS6-203ENST00000419210 ZMYM3Q14202 1370 aa29.97■■■□□ 2.39
COPS6-203ENST00000419210 CEP170BQ9Y4F5 1589 aaPredicted RBP29.97■■■□□ 2.39
COPS6-203ENST00000419210 PKD2Q13563 968 aa29.96■■■□□ 2.39
COPS6-203ENST00000419210 SCAF1Q9H7N4 1312 aaKnown RBP29.95■■■□□ 2.38
COPS6-203ENST00000419210 CDC42BPAQ5VT25 1732 aa29.93■■■□□ 2.38
COPS6-203ENST00000419210 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
COPS6-203ENST00000419210 SAMD9LQ8IVG5 1584 aa29.92■■■□□ 2.38
COPS6-203ENST00000419210 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
COPS6-203ENST00000419210 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
COPS6-203ENST00000419210 PPP6R1Q9UPN7 881 aa29.89■■■□□ 2.38
COPS6-203ENST00000419210 HSPA1LP34931 641 aa29.87■■■□□ 2.37
COPS6-203ENST00000419210 PIP4K2BP78356 416 aa29.85■■■□□ 2.37
COPS6-203ENST00000419210 SYCP2Q9BX26 1530 aa29.85■■■□□ 2.37
COPS6-203ENST00000419210 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
COPS6-203ENST00000419210 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
COPS6-203ENST00000419210 POLR1AO95602 1720 aaPredicted RBP29.82■■■□□ 2.36
COPS6-203ENST00000419210 PLXNC1O60486 1568 aa29.81■■■□□ 2.36
COPS6-203ENST00000419210 ATP7AQ04656 1500 aa29.81■■■□□ 2.36
COPS6-203ENST00000419210 SPAG9O60271 1321 aaKnown RBP29.81■■■□□ 2.36
COPS6-203ENST00000419210 PHF23Q9BUL5 403 aaPredicted RBP29.8■■■□□ 2.36
COPS6-203ENST00000419210 ZNF777Q9ULD5 760 aaPredicted RBP29.8■■■□□ 2.36
COPS6-203ENST00000419210 TOM1O60784 492 aa29.79■■■□□ 2.36
COPS6-203ENST00000419210 CPS1P31327 1500 aa29.79■■■□□ 2.36
COPS6-203ENST00000419210 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
COPS6-203ENST00000419210 A2MP01023 1474 aa29.76■■■□□ 2.35
COPS6-203ENST00000419210 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
COPS6-203ENST00000419210 A2ML1A8K2U0 1454 aa29.74■■■□□ 2.35
COPS6-203ENST00000419210 GGT6Q6P531 493 aa29.73■■■□□ 2.35
COPS6-203ENST00000419210 CASKIN1Q8WXD9 1431 aa29.71■■■□□ 2.35
COPS6-203ENST00000419210 ADGBQ8N7X0 1667 aa29.69■■■□□ 2.34
COPS6-203ENST00000419210 NEURL4Q96JN8 1562 aa29.69■■■□□ 2.34
COPS6-203ENST00000419210 SHANK2Q9UPX8 1470 aa29.69■■■□□ 2.34
COPS6-203ENST00000419210 HNRNPMP52272 730 aaKnown RBP eCLIP29.69■■■□□ 2.34
COPS6-203ENST00000419210 PLEKHH2Q8IVE3 1493 aa29.65■■■□□ 2.34
COPS6-203ENST00000419210 GPATCH8Q9UKJ3 1502 aaKnown RBP29.64■■■□□ 2.34
COPS6-203ENST00000419210 KIAA1107Q9UPP5 1409 aa29.62■■■□□ 2.33
COPS6-203ENST00000419210 VWDEQ8N2E2 1590 aa29.58■■■□□ 2.33
COPS6-203ENST00000419210 FYCO1Q9BQS8 1478 aa29.58■■■□□ 2.33
COPS6-203ENST00000419210 ALKQ9UM73 1620 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms