RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
DDX39B-205ENST00000419020 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
DDX39B-205ENST00000419020 CFAP74Q9C0B2 1584 aa20.32■□□□□ 0.84
DDX39B-205ENST00000419020 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
DDX39B-205ENST00000419020 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
DDX39B-205ENST00000419020 SETD1BQ9UPS6 1966 aaKnown RBP20.27■□□□□ 0.84
DDX39B-205ENST00000419020 ATP10AO60312 1499 aa20.25■□□□□ 0.83
DDX39B-205ENST00000419020 NUP153P49790 1475 aaKnown RBP20.25■□□□□ 0.83
DDX39B-205ENST00000419020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDX39B-205ENST00000419020 C9orf84Q5VXU9 1444 aa20.24■□□□□ 0.83
DDX39B-205ENST00000419020 UBAP1LF5GYI3 381 aa20.23■□□□□ 0.83
DDX39B-205ENST00000419020 PLEKHD1A6NEE1 506 aa20.21■□□□□ 0.83
DDX39B-205ENST00000419020 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
DDX39B-205ENST00000419020 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
DDX39B-205ENST00000419020 PRXQ9BXM0 1461 aa20.19■□□□□ 0.82
DDX39B-205ENST00000419020 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
DDX39B-205ENST00000419020 SAMD9Q5K651 1589 aa20.18■□□□□ 0.82
DDX39B-205ENST00000419020 C3P01024 1663 aa20.16■□□□□ 0.82
DDX39B-205ENST00000419020 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.81
DDX39B-205ENST00000419020 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
DDX39B-205ENST00000419020 PLCH2O75038 1416 aa20.1■□□□□ 0.81
DDX39B-205ENST00000419020 HSPA1LP34931 641 aa20.09■□□□□ 0.81
DDX39B-205ENST00000419020 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.8
DDX39B-205ENST00000419020 NCKAP5LQ9HCH0 1330 aa20.05■□□□□ 0.8
DDX39B-205ENST00000419020 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
DDX39B-205ENST00000419020 ZNF518AQ6AHZ1 1483 aa20.02■□□□□ 0.8
DDX39B-205ENST00000419020 DIP2CQ9Y2E4 1556 aa20.02■□□□□ 0.8
DDX39B-205ENST00000419020 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.79
DDX39B-205ENST00000419020 KDM5CP41229 1560 aa20.01■□□□□ 0.79
DDX39B-205ENST00000419020 REREQ9P2R6 1566 aa20.01■□□□□ 0.79
DDX39B-205ENST00000419020 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
DDX39B-205ENST00000419020 ESF1Q9H501 851 aaKnown RBP20.01■□□□□ 0.79
DDX39B-205ENST00000419020 PIP4K2BP78356 416 aa20■□□□□ 0.79
DDX39B-205ENST00000419020 EFCAB2Q5VUJ9 269 aa20■□□□□ 0.79
DDX39B-205ENST00000419020 AGLP35573 1532 aa19.97■□□□□ 0.79
DDX39B-205ENST00000419020 MYT1LQ9UL68 1186 aa19.97■□□□□ 0.79
DDX39B-205ENST00000419020 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
DDX39B-205ENST00000419020 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
DDX39B-205ENST00000419020 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
DDX39B-205ENST00000419020 NPATQ14207 1427 aa19.95■□□□□ 0.78
DDX39B-205ENST00000419020 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
DDX39B-205ENST00000419020 MYO5CQ9NQX4 1742 aa19.94■□□□□ 0.78
DDX39B-205ENST00000419020 PKD2Q13563 968 aa19.94■□□□□ 0.78
DDX39B-205ENST00000419020 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
DDX39B-205ENST00000419020 TOM1O60784 492 aa19.92■□□□□ 0.78
DDX39B-205ENST00000419020 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
DDX39B-205ENST00000419020 MLH3Q9UHC1 1453 aa19.91■□□□□ 0.78
DDX39B-205ENST00000419020 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
DDX39B-205ENST00000419020 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
DDX39B-205ENST00000419020 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
DDX39B-205ENST00000419020 ZNF142P52746 1687 aaPredicted RBP19.87■□□□□ 0.77
DDX39B-205ENST00000419020 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
DDX39B-205ENST00000419020 MYO3AQ8NEV4 1616 aa19.85■□□□□ 0.77
DDX39B-205ENST00000419020 KIF14Q15058 1648 aa19.84■□□□□ 0.77
DDX39B-205ENST00000419020 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
DDX39B-205ENST00000419020 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.77
DDX39B-205ENST00000419020 CPS1P31327 1500 aa19.82■□□□□ 0.76
DDX39B-205ENST00000419020 RGS17Q9UGC6 210 aaPredicted RBP19.81■□□□□ 0.76
DDX39B-205ENST00000419020 ALKQ9UM73 1620 aa19.8■□□□□ 0.76
DDX39B-205ENST00000419020 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
DDX39B-205ENST00000419020 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
DDX39B-205ENST00000419020 SHANK2Q9UPX8 1470 aa19.78■□□□□ 0.76
DDX39B-205ENST00000419020 PTPRKQ15262 1439 aa19.77■□□□□ 0.76
DDX39B-205ENST00000419020 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
DDX39B-205ENST00000419020 ABCC1P33527 1531 aa19.75■□□□□ 0.75
DDX39B-205ENST00000419020 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
DDX39B-205ENST00000419020 CDC42BPBQ9Y5S2 1711 aa19.74■□□□□ 0.75
DDX39B-205ENST00000419020 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
DDX39B-205ENST00000419020 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
DDX39B-205ENST00000419020 ITSN2Q9NZM3 1697 aa19.72■□□□□ 0.75
DDX39B-205ENST00000419020 TROQ12816 1431 aaPredicted RBP19.72■□□□□ 0.75
DDX39B-205ENST00000419020 NEURL4Q96JN8 1562 aa19.71■□□□□ 0.75
DDX39B-205ENST00000419020 DNMT1P26358 1616 aaKnown RBP19.7■□□□□ 0.74
DDX39B-205ENST00000419020 A2ML1A8K2U0 1454 aa19.69■□□□□ 0.74
DDX39B-205ENST00000419020 POLR1AO95602 1720 aaPredicted RBP19.68■□□□□ 0.74
DDX39B-205ENST00000419020 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
DDX39B-205ENST00000419020 CLIP1P30622 1438 aa19.67■□□□□ 0.74
DDX39B-205ENST00000419020 PREX2Q70Z35 1606 aa19.66■□□□□ 0.74
DDX39B-205ENST00000419020 POTEAQ6S8J7 498 aa19.65■□□□□ 0.74
DDX39B-205ENST00000419020 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
DDX39B-205ENST00000419020 PLXNC1O60486 1568 aa19.61■□□□□ 0.73
DDX39B-205ENST00000419020 FMN1Q68DA7 1419 aa19.61■□□□□ 0.73
DDX39B-205ENST00000419020 GGT6Q6P531 493 aa19.61■□□□□ 0.73
DDX39B-205ENST00000419020 SPAG9O60271 1321 aaKnown RBP19.58■□□□□ 0.73
DDX39B-205ENST00000419020 LRRC7Q96NW7 1537 aa19.57■□□□□ 0.72
DDX39B-205ENST00000419020 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
DDX39B-205ENST00000419020 RNF17Q9BXT8 1623 aaKnown RBP19.57■□□□□ 0.72
DDX39B-205ENST00000419020 A2MP01023 1474 aa19.56■□□□□ 0.72
DDX39B-205ENST00000419020 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
DDX39B-205ENST00000419020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
DDX39B-205ENST00000419020 SETD1AO15047 1707 aaKnown RBP19.55■□□□□ 0.72
DDX39B-205ENST00000419020 ATP7AQ04656 1500 aa19.55■□□□□ 0.72
DDX39B-205ENST00000419020 STRCP1A6NGW2 1772 aa19.55■□□□□ 0.72
DDX39B-205ENST00000419020 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
DDX39B-205ENST00000419020 MED14O60244 1454 aa19.54■□□□□ 0.72
DDX39B-205ENST00000419020 SYCP2Q9BX26 1530 aa19.53■□□□□ 0.72
DDX39B-205ENST00000419020 TNRQ92752 1358 aa19.53■□□□□ 0.72
DDX39B-205ENST00000419020 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
DDX39B-205ENST00000419020 FBXO31Q5XUX0 539 aaPredicted RBP19.52■□□□□ 0.72
DDX39B-205ENST00000419020 ZNF777Q9ULD5 760 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms