RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ARHGEF12Q9NZN5 1544 aa23.27■■□□□ 1.32
SSB-204ENST00000417292 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
SSB-204ENST00000417292 PLCH2O75038 1416 aa23.25■■□□□ 1.31
SSB-204ENST00000417292 ATP10AO60312 1499 aa23.24■■□□□ 1.31
SSB-204ENST00000417292 CEBPAP49715 358 aaPredicted RBP23.23■■□□□ 1.31
SSB-204ENST00000417292 ILDR2Q71H61 639 aa23.23■■□□□ 1.31
SSB-204ENST00000417292 PREX1Q8TCU6 1659 aa23.22■■□□□ 1.31
SSB-204ENST00000417292 C9orf84Q5VXU9 1444 aa23.21■■□□□ 1.31
SSB-204ENST00000417292 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
SSB-204ENST00000417292 DISP3Q9P2K9 1392 aa23.18■■□□□ 1.3
SSB-204ENST00000417292 EEA1Q15075 1411 aa23.17■■□□□ 1.3
SSB-204ENST00000417292 EFCAB2Q5VUJ9 269 aa23.14■■□□□ 1.29
SSB-204ENST00000417292 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
SSB-204ENST00000417292 SOCS7O14512 581 aa23.12■■□□□ 1.29
SSB-204ENST00000417292 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
SSB-204ENST00000417292 UHRF1BP1Q6BDS2 1440 aa23.1■■□□□ 1.29
SSB-204ENST00000417292 AFAP1Q8N556 730 aa23.09■■□□□ 1.29
SSB-204ENST00000417292 ZNF518AQ6AHZ1 1483 aa23.09■■□□□ 1.29
SSB-204ENST00000417292 KIF14Q15058 1648 aa23.08■■□□□ 1.29
SSB-204ENST00000417292 KDM5CP41229 1560 aa23.08■■□□□ 1.29
SSB-204ENST00000417292 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
SSB-204ENST00000417292 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
SSB-204ENST00000417292 DIP2CQ9Y2E4 1556 aa23.05■■□□□ 1.28
SSB-204ENST00000417292 PTPRTO14522 1441 aa23.03■■□□□ 1.28
SSB-204ENST00000417292 ARHGAP5Q13017 1502 aa23.03■■□□□ 1.28
SSB-204ENST00000417292 C3P01024 1663 aa23.02■■□□□ 1.28
SSB-204ENST00000417292 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
SSB-204ENST00000417292 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
SSB-204ENST00000417292 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
SSB-204ENST00000417292 SPATA31D1Q6ZQQ2 1576 aa23.01■■□□□ 1.27
SSB-204ENST00000417292 ABCA6Q8N139 1617 aa23■■□□□ 1.27
SSB-204ENST00000417292 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
SSB-204ENST00000417292 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
SSB-204ENST00000417292 LTBP4Q8N2S1 1624 aa22.99■■□□□ 1.27
SSB-204ENST00000417292 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
SSB-204ENST00000417292 MLH3Q9UHC1 1453 aa22.98■■□□□ 1.27
SSB-204ENST00000417292 AGLP35573 1532 aa22.95■■□□□ 1.26
SSB-204ENST00000417292 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
SSB-204ENST00000417292 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
SSB-204ENST00000417292 CDC42BPBQ9Y5S2 1711 aa22.94■■□□□ 1.26
SSB-204ENST00000417292 LRRIQ1Q96JM4 1722 aa22.93■■□□□ 1.26
SSB-204ENST00000417292 CLIP1P30622 1438 aa22.92■■□□□ 1.26
SSB-204ENST00000417292 NCOA1Q15788 1441 aa22.92■■□□□ 1.26
SSB-204ENST00000417292 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
SSB-204ENST00000417292 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
SSB-204ENST00000417292 ABCC1P33527 1531 aa22.9■■□□□ 1.26
SSB-204ENST00000417292 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
SSB-204ENST00000417292 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
SSB-204ENST00000417292 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
SSB-204ENST00000417292 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
SSB-204ENST00000417292 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
SSB-204ENST00000417292 CAMSAP1Q5T5Y3 1602 aa22.84■■□□□ 1.25
SSB-204ENST00000417292 NPATQ14207 1427 aa22.81■■□□□ 1.24
SSB-204ENST00000417292 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
SSB-204ENST00000417292 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
SSB-204ENST00000417292 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
SSB-204ENST00000417292 MROH2AA6NES4 1674 aa22.78■■□□□ 1.24
SSB-204ENST00000417292 CDC42BPAQ5VT25 1732 aa22.77■■□□□ 1.24
SSB-204ENST00000417292 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
SSB-204ENST00000417292 UBAP1LF5GYI3 381 aa22.74■■□□□ 1.23
SSB-204ENST00000417292 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
SSB-204ENST00000417292 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
SSB-204ENST00000417292 SUPT6HQ7KZ85 1726 aaKnown RBP22.71■■□□□ 1.23
SSB-204ENST00000417292 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
SSB-204ENST00000417292 SYCP2Q9BX26 1530 aa22.71■■□□□ 1.23
SSB-204ENST00000417292 PLA2R1Q13018 1463 aa22.7■■□□□ 1.22
SSB-204ENST00000417292 MYO3AQ8NEV4 1616 aa22.7■■□□□ 1.22
SSB-204ENST00000417292 CLTCQ00610 1675 aaKnown RBP22.7■■□□□ 1.22
SSB-204ENST00000417292 ZNF142P52746 1687 aaPredicted RBP22.69■■□□□ 1.22
SSB-204ENST00000417292 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
SSB-204ENST00000417292 SPAG9O60271 1321 aaKnown RBP22.69■■□□□ 1.22
SSB-204ENST00000417292 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
SSB-204ENST00000417292 HNRNPMP52272 730 aaKnown RBP eCLIP22.68■■□□□ 1.22
SSB-204ENST00000417292 PKD2Q13563 968 aa22.68■■□□□ 1.22
SSB-204ENST00000417292 PLXNC1O60486 1568 aa22.67■■□□□ 1.22
SSB-204ENST00000417292 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
SSB-204ENST00000417292 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
SSB-204ENST00000417292 ATP7AQ04656 1500 aa22.66■■□□□ 1.22
SSB-204ENST00000417292 A2MP01023 1474 aa22.63■■□□□ 1.21
SSB-204ENST00000417292 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
SSB-204ENST00000417292 GGT6Q6P531 493 aa22.61■■□□□ 1.21
SSB-204ENST00000417292 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
SSB-204ENST00000417292 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
SSB-204ENST00000417292 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
SSB-204ENST00000417292 HSPA1LP34931 641 aa22.56■■□□□ 1.2
SSB-204ENST00000417292 CFDP1Q9UEE9 299 aaPredicted RBP22.56■■□□□ 1.2
SSB-204ENST00000417292 PLEKHH2Q8IVE3 1493 aa22.55■■□□□ 1.2
SSB-204ENST00000417292 DNMT1P26358 1616 aaKnown RBP22.55■■□□□ 1.2
SSB-204ENST00000417292 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
SSB-204ENST00000417292 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
SSB-204ENST00000417292 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
SSB-204ENST00000417292 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
SSB-204ENST00000417292 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
SSB-204ENST00000417292 ADGBQ8N7X0 1667 aa22.51■■□□□ 1.19
SSB-204ENST00000417292 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
SSB-204ENST00000417292 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
SSB-204ENST00000417292 ZNF644Q9H582 1327 aaPredicted RBP22.49■■□□□ 1.19
SSB-204ENST00000417292 CPS1P31327 1500 aa22.48■■□□□ 1.19
SSB-204ENST00000417292 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
SSB-204ENST00000417292 TOM1O60784 492 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms