RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
SMIM12-201ENST00000417239 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
SMIM12-201ENST00000417239 C3P01024 1663 aa15.14■□□□□ 0.01
SMIM12-201ENST00000417239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
SMIM12-201ENST00000417239 MLECQ14165 292 aa15.14■□□□□ 0.01
SMIM12-201ENST00000417239 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
SMIM12-201ENST00000417239 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
SMIM12-201ENST00000417239 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
SMIM12-201ENST00000417239 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
SMIM12-201ENST00000417239 ATP10AO60312 1499 aa15.12■□□□□ 0.01
SMIM12-201ENST00000417239 IQSEC2Q5JU85 1478 aa15.12■□□□□ 0.01
SMIM12-201ENST00000417239 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
SMIM12-201ENST00000417239 PTPRTO14522 1441 aa15.1■□□□□ 0.01
SMIM12-201ENST00000417239 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
SMIM12-201ENST00000417239 PLEKHD1A6NEE1 506 aa15.08■□□□□ 0
SMIM12-201ENST00000417239 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
SMIM12-201ENST00000417239 KDM5CP41229 1560 aa15.07■□□□□ 0
SMIM12-201ENST00000417239 PLCH2O75038 1416 aa15.06■□□□□ 0
SMIM12-201ENST00000417239 REREQ9P2R6 1566 aa15.06■□□□□ 0
SMIM12-201ENST00000417239 DIP2CQ9Y2E4 1556 aa15.06■□□□□ 0
SMIM12-201ENST00000417239 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
SMIM12-201ENST00000417239 ABCA6Q8N139 1617 aa15.03■□□□□ -0
SMIM12-201ENST00000417239 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
SMIM12-201ENST00000417239 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
SMIM12-201ENST00000417239 KIF14Q15058 1648 aa15□□□□□ -0.01
SMIM12-201ENST00000417239 MROH2AA6NES4 1674 aa14.98□□□□□ -0.01
SMIM12-201ENST00000417239 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
SMIM12-201ENST00000417239 CAMSAP1Q5T5Y3 1602 aa14.97□□□□□ -0.01
SMIM12-201ENST00000417239 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
SMIM12-201ENST00000417239 AGLP35573 1532 aa14.97□□□□□ -0.01
SMIM12-201ENST00000417239 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
SMIM12-201ENST00000417239 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
SMIM12-201ENST00000417239 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
SMIM12-201ENST00000417239 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
SMIM12-201ENST00000417239 ITSN2Q9NZM3 1697 aa14.94□□□□□ -0.02
SMIM12-201ENST00000417239 KIDINS220Q9ULH0 1771 aa14.93□□□□□ -0.02
SMIM12-201ENST00000417239 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
SMIM12-201ENST00000417239 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
SMIM12-201ENST00000417239 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
SMIM12-201ENST00000417239 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
SMIM12-201ENST00000417239 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
SMIM12-201ENST00000417239 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
SMIM12-201ENST00000417239 PREX2Q70Z35 1606 aa14.91□□□□□ -0.02
SMIM12-201ENST00000417239 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
SMIM12-201ENST00000417239 ABCC1P33527 1531 aa14.9□□□□□ -0.02
SMIM12-201ENST00000417239 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
SMIM12-201ENST00000417239 NPATQ14207 1427 aa14.88□□□□□ -0.03
SMIM12-201ENST00000417239 ZNF335Q9H4Z2 1342 aaPredicted RBP14.88□□□□□ -0.03
SMIM12-201ENST00000417239 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
SMIM12-201ENST00000417239 UBAP1LF5GYI3 381 aa14.87□□□□□ -0.03
SMIM12-201ENST00000417239 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
SMIM12-201ENST00000417239 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
SMIM12-201ENST00000417239 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
SMIM12-201ENST00000417239 CDC42BPAQ5VT25 1732 aa14.85□□□□□ -0.03
SMIM12-201ENST00000417239 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
SMIM12-201ENST00000417239 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
SMIM12-201ENST00000417239 EEA1Q15075 1411 aa14.83□□□□□ -0.03
SMIM12-201ENST00000417239 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.04
SMIM12-201ENST00000417239 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
SMIM12-201ENST00000417239 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
SMIM12-201ENST00000417239 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
SMIM12-201ENST00000417239 CLIP1P30622 1438 aa14.81□□□□□ -0.04
SMIM12-201ENST00000417239 SAMD9LQ8IVG5 1584 aa14.8□□□□□ -0.04
SMIM12-201ENST00000417239 PLXNC1O60486 1568 aa14.79□□□□□ -0.04
SMIM12-201ENST00000417239 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
SMIM12-201ENST00000417239 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
SMIM12-201ENST00000417239 HSPA1LP34931 641 aa14.77□□□□□ -0.05
SMIM12-201ENST00000417239 PKD2Q13563 968 aa14.77□□□□□ -0.05
SMIM12-201ENST00000417239 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.05
SMIM12-201ENST00000417239 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.05
SMIM12-201ENST00000417239 ARHGAP35Q9NRY4 1499 aa14.76□□□□□ -0.05
SMIM12-201ENST00000417239 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
SMIM12-201ENST00000417239 INO80Q9ULG1 1556 aaPredicted RBP14.76□□□□□ -0.05
SMIM12-201ENST00000417239 CPS1P31327 1500 aa14.76□□□□□ -0.05
SMIM12-201ENST00000417239 PTPRKQ15262 1439 aa14.75□□□□□ -0.05
SMIM12-201ENST00000417239 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
SMIM12-201ENST00000417239 ATP7AQ04656 1500 aa14.73□□□□□ -0.05
SMIM12-201ENST00000417239 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
SMIM12-201ENST00000417239 PPP6R1Q9UPN7 881 aa14.72□□□□□ -0.05
SMIM12-201ENST00000417239 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.05
SMIM12-201ENST00000417239 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
SMIM12-201ENST00000417239 A2ML1A8K2U0 1454 aa14.7□□□□□ -0.06
SMIM12-201ENST00000417239 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
SMIM12-201ENST00000417239 VWDEQ8N2E2 1590 aa14.7□□□□□ -0.06
SMIM12-201ENST00000417239 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
SMIM12-201ENST00000417239 A2MP01023 1474 aa14.68□□□□□ -0.06
SMIM12-201ENST00000417239 CCDC18Q5T9S5 1454 aa14.68□□□□□ -0.06
SMIM12-201ENST00000417239 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
SMIM12-201ENST00000417239 TOM1O60784 492 aa14.67□□□□□ -0.06
SMIM12-201ENST00000417239 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
SMIM12-201ENST00000417239 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
SMIM12-201ENST00000417239 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
SMIM12-201ENST00000417239 SPAG9O60271 1321 aaKnown RBP14.64□□□□□ -0.07
SMIM12-201ENST00000417239 IQGAP1P46940 1657 aa14.63□□□□□ -0.07
SMIM12-201ENST00000417239 SYNMO15061 1565 aa14.63□□□□□ -0.07
SMIM12-201ENST00000417239 GPATCH8Q9UKJ3 1502 aaKnown RBP14.61□□□□□ -0.07
SMIM12-201ENST00000417239 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
SMIM12-201ENST00000417239 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
SMIM12-201ENST00000417239 MED14O60244 1454 aa14.59□□□□□ -0.07
SMIM12-201ENST00000417239 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms