RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
SCN1B-202ENST00000415950 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
SCN1B-202ENST00000415950 MSH5O43196 834 aa16.64■□□□□ 0.25
SCN1B-202ENST00000415950 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
SCN1B-202ENST00000415950 ARHGAP35Q9NRY4 1499 aa16.64■□□□□ 0.25
SCN1B-202ENST00000415950 PDE4AP27815 886 aa16.63■□□□□ 0.25
SCN1B-202ENST00000415950 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
SCN1B-202ENST00000415950 FHOD3Q2V2M9 1422 aa16.63■□□□□ 0.25
SCN1B-202ENST00000415950 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
SCN1B-202ENST00000415950 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCN1B-202ENST00000415950 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
SCN1B-202ENST00000415950 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
SCN1B-202ENST00000415950 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
SCN1B-202ENST00000415950 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.25
SCN1B-202ENST00000415950 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.25
SCN1B-202ENST00000415950 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.25
SCN1B-202ENST00000415950 IL27Q8NEV9 243 aa16.58■□□□□ 0.24
SCN1B-202ENST00000415950 ARID3AQ99856 593 aa16.57■□□□□ 0.24
SCN1B-202ENST00000415950 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
SCN1B-202ENST00000415950 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
SCN1B-202ENST00000415950 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
SCN1B-202ENST00000415950 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
SCN1B-202ENST00000415950 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
SCN1B-202ENST00000415950 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
SCN1B-202ENST00000415950 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
SCN1B-202ENST00000415950 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
SCN1B-202ENST00000415950 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
SCN1B-202ENST00000415950 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
SCN1B-202ENST00000415950 UNC13AQ9UPW8 1703 aa16.53■□□□□ 0.24
SCN1B-202ENST00000415950 TMF1P82094 1093 aa16.53■□□□□ 0.24
SCN1B-202ENST00000415950 SAFB2Q14151 953 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCN1B-202ENST00000415950 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
SCN1B-202ENST00000415950 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
SCN1B-202ENST00000415950 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
SCN1B-202ENST00000415950 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
SCN1B-202ENST00000415950 CDK11BP21127 795 aaKnown RBP16.5■□□□□ 0.23
SCN1B-202ENST00000415950 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
SCN1B-202ENST00000415950 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
SCN1B-202ENST00000415950 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
SCN1B-202ENST00000415950 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
SCN1B-202ENST00000415950 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
SCN1B-202ENST00000415950 NUP155O75694 1391 aa16.48■□□□□ 0.23
SCN1B-202ENST00000415950 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
SCN1B-202ENST00000415950 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
SCN1B-202ENST00000415950 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
SCN1B-202ENST00000415950 GSE1Q14687 1217 aa16.46■□□□□ 0.23
SCN1B-202ENST00000415950 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
SCN1B-202ENST00000415950 APBB1O00213 710 aa16.46■□□□□ 0.23
SCN1B-202ENST00000415950 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
SCN1B-202ENST00000415950 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
SCN1B-202ENST00000415950 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SCN1B-202ENST00000415950 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
SCN1B-202ENST00000415950 RALBP1Q15311 655 aa16.45■□□□□ 0.22
SCN1B-202ENST00000415950 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
SCN1B-202ENST00000415950 ROCK2O75116 1388 aaKnown RBP16.45■□□□□ 0.22
SCN1B-202ENST00000415950 TULP1O00294 542 aaPredicted RBP16.44■□□□□ 0.22
SCN1B-202ENST00000415950 MFAP1P55081 439 aaKnown RBP16.44■□□□□ 0.22
SCN1B-202ENST00000415950 KIF21BO75037 1637 aa16.43■□□□□ 0.22
SCN1B-202ENST00000415950 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
SCN1B-202ENST00000415950 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
SCN1B-202ENST00000415950 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
SCN1B-202ENST00000415950 PANK3Q9H999 370 aa16.42■□□□□ 0.22
SCN1B-202ENST00000415950 AKNAQ7Z591 1439 aa16.42■□□□□ 0.22
SCN1B-202ENST00000415950 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
SCN1B-202ENST00000415950 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCN1B-202ENST00000415950 FGD1P98174 961 aa16.4■□□□□ 0.22
SCN1B-202ENST00000415950 NAP1L2Q9ULW6 460 aaPredicted RBP16.4■□□□□ 0.22
SCN1B-202ENST00000415950 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
SCN1B-202ENST00000415950 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
SCN1B-202ENST00000415950 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
SCN1B-202ENST00000415950 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
SCN1B-202ENST00000415950 KCNJ4P48050 445 aa16.39■□□□□ 0.21
SCN1B-202ENST00000415950 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
SCN1B-202ENST00000415950 SOX12O15370 315 aa16.38■□□□□ 0.21
SCN1B-202ENST00000415950 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
SCN1B-202ENST00000415950 CCDC7Q96M83 1385 aa16.37■□□□□ 0.21
SCN1B-202ENST00000415950 NFKBIBQ15653 356 aa16.37■□□□□ 0.21
SCN1B-202ENST00000415950 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
SCN1B-202ENST00000415950 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
SCN1B-202ENST00000415950 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCN1B-202ENST00000415950 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
SCN1B-202ENST00000415950 USP47Q96K76 1375 aa16.36■□□□□ 0.21
SCN1B-202ENST00000415950 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
SCN1B-202ENST00000415950 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
SCN1B-202ENST00000415950 POGKQ9P215 609 aa16.35■□□□□ 0.21
SCN1B-202ENST00000415950 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
SCN1B-202ENST00000415950 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
SCN1B-202ENST00000415950 APAF1O14727 1248 aa16.35■□□□□ 0.21
SCN1B-202ENST00000415950 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
SCN1B-202ENST00000415950 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-202ENST00000415950 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
SCN1B-202ENST00000415950 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
SCN1B-202ENST00000415950 WDR97A6NE52 1622 aa16.33■□□□□ 0.21
SCN1B-202ENST00000415950 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.2
SCN1B-202ENST00000415950 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
SCN1B-202ENST00000415950 IGF1RP08069 1367 aa16.32■□□□□ 0.2
SCN1B-202ENST00000415950 STK26Q9P289 416 aa16.32■□□□□ 0.2
SCN1B-202ENST00000415950 FRAT2O75474 233 aaPredicted RBP16.31■□□□□ 0.2
SCN1B-202ENST00000415950 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-202ENST00000415950 MS4A1P11836 297 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms