RNA–Protein interactions for RNA: ENST00000415938.7

PKD1-202, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 3,386 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-202ENST00000415938 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
PKD1-202ENST00000415938 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
PKD1-202ENST00000415938 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
PKD1-202ENST00000415938 NCOA2Q15596 1464 aa18.23■□□□□ 0.51
PKD1-202ENST00000415938 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
PKD1-202ENST00000415938 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
PKD1-202ENST00000415938 CTTNBP2Q8WZ74 1663 aa18.23■□□□□ 0.51
PKD1-202ENST00000415938 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
PKD1-202ENST00000415938 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
PKD1-202ENST00000415938 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
PKD1-202ENST00000415938 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.5
PKD1-202ENST00000415938 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
PKD1-202ENST00000415938 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
PKD1-202ENST00000415938 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
PKD1-202ENST00000415938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.18■□□□□ 0.5
PKD1-202ENST00000415938 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
PKD1-202ENST00000415938 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.5
PKD1-202ENST00000415938 NUDCQ9Y266 331 aa18.14■□□□□ 0.5
PKD1-202ENST00000415938 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
PKD1-202ENST00000415938 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
PKD1-202ENST00000415938 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
PKD1-202ENST00000415938 NCOA1Q15788 1441 aa18.08■□□□□ 0.48
PKD1-202ENST00000415938 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.48
PKD1-202ENST00000415938 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
PKD1-202ENST00000415938 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
PKD1-202ENST00000415938 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
PKD1-202ENST00000415938 NEFMP07197 916 aa18.06■□□□□ 0.48
PKD1-202ENST00000415938 JPH4Q96JJ6 628 aa18.06■□□□□ 0.48
PKD1-202ENST00000415938 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
PKD1-202ENST00000415938 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
PKD1-202ENST00000415938 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
PKD1-202ENST00000415938 IQGAP2Q13576 1575 aa18.06■□□□□ 0.48
PKD1-202ENST00000415938 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
PKD1-202ENST00000415938 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
PKD1-202ENST00000415938 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
PKD1-202ENST00000415938 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
PKD1-202ENST00000415938 KDM6BO15054 1643 aa18.02■□□□□ 0.48
PKD1-202ENST00000415938 SKAP1Q86WV1 359 aa18.02■□□□□ 0.48
PKD1-202ENST00000415938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
PKD1-202ENST00000415938 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
PKD1-202ENST00000415938 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
PKD1-202ENST00000415938 HECW1Q76N89 1606 aa18■□□□□ 0.47
PKD1-202ENST00000415938 USP47Q96K76 1375 aa18■□□□□ 0.47
PKD1-202ENST00000415938 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
PKD1-202ENST00000415938 SMG6Q86US8 1419 aaKnown RBP17.99■□□□□ 0.47
PKD1-202ENST00000415938 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
PKD1-202ENST00000415938 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
PKD1-202ENST00000415938 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
PKD1-202ENST00000415938 PLIN1O60240 522 aa17.98■□□□□ 0.47
PKD1-202ENST00000415938 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
PKD1-202ENST00000415938 PKD2Q13563 968 aa17.97■□□□□ 0.47
PKD1-202ENST00000415938 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
PKD1-202ENST00000415938 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
PKD1-202ENST00000415938 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
PKD1-202ENST00000415938 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
PKD1-202ENST00000415938 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.46
PKD1-202ENST00000415938 DAXXQ9UER7 740 aaPredicted RBP17.95■□□□□ 0.46
PKD1-202ENST00000415938 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
PKD1-202ENST00000415938 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
PKD1-202ENST00000415938 PDE4AP27815 886 aa17.94■□□□□ 0.46
PKD1-202ENST00000415938 RRP1P56182 461 aaKnown RBP17.93■□□□□ 0.46
PKD1-202ENST00000415938 LRRIQ1Q96JM4 1722 aa17.93■□□□□ 0.46
PKD1-202ENST00000415938 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
PKD1-202ENST00000415938 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
PKD1-202ENST00000415938 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
PKD1-202ENST00000415938 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
PKD1-202ENST00000415938 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
PKD1-202ENST00000415938 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
PKD1-202ENST00000415938 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
PKD1-202ENST00000415938 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
PKD1-202ENST00000415938 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
PKD1-202ENST00000415938 MIA2Q96PC5 1412 aa17.9■□□□□ 0.46
PKD1-202ENST00000415938 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
PKD1-202ENST00000415938 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
PKD1-202ENST00000415938 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
PKD1-202ENST00000415938 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
PKD1-202ENST00000415938 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
PKD1-202ENST00000415938 WDR62O43379 1518 aa17.86■□□□□ 0.45
PKD1-202ENST00000415938 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
PKD1-202ENST00000415938 CARMIL2Q6F5E8 1435 aa17.86■□□□□ 0.45
PKD1-202ENST00000415938 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
PKD1-202ENST00000415938 DAPK1P53355 1430 aa17.84■□□□□ 0.45
PKD1-202ENST00000415938 SPATA31E1Q6ZUB1 1445 aa17.84■□□□□ 0.45
PKD1-202ENST00000415938 EIF5BO60841 1220 aaKnown RBP17.83■□□□□ 0.45
PKD1-202ENST00000415938 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.44
PKD1-202ENST00000415938 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.44
PKD1-202ENST00000415938 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
PKD1-202ENST00000415938 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
PKD1-202ENST00000415938 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
PKD1-202ENST00000415938 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
PKD1-202ENST00000415938 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
PKD1-202ENST00000415938 ABCC5O15440 1437 aa17.81■□□□□ 0.44
PKD1-202ENST00000415938 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
PKD1-202ENST00000415938 CRBNQ96SW2 442 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 BACH2Q9BYV9 841 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
PKD1-202ENST00000415938 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms