RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
RBM28-202ENST00000415472 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
RBM28-202ENST00000415472 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
RBM28-202ENST00000415472 FBLN2P98095 1184 aa16.44■□□□□ 0.22
RBM28-202ENST00000415472 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
RBM28-202ENST00000415472 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
RBM28-202ENST00000415472 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
RBM28-202ENST00000415472 ANKRD30BQ9BXX2 1392 aa16.41■□□□□ 0.22
RBM28-202ENST00000415472 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
RBM28-202ENST00000415472 BCANQ96GW7 911 aa16.4■□□□□ 0.22
RBM28-202ENST00000415472 KIF14Q15058 1648 aa16.39■□□□□ 0.21
RBM28-202ENST00000415472 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
RBM28-202ENST00000415472 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
RBM28-202ENST00000415472 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
RBM28-202ENST00000415472 NBPF8Q3BBV2 869 aa16.38■□□□□ 0.21
RBM28-202ENST00000415472 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
RBM28-202ENST00000415472 FKBP8Q14318 412 aa16.37■□□□□ 0.21
RBM28-202ENST00000415472 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
RBM28-202ENST00000415472 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
RBM28-202ENST00000415472 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
RBM28-202ENST00000415472 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
RBM28-202ENST00000415472 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
RBM28-202ENST00000415472 RPRD2Q5VT52 1461 aaKnown RBP16.36■□□□□ 0.21
RBM28-202ENST00000415472 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
RBM28-202ENST00000415472 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
RBM28-202ENST00000415472 TEX14Q8IWB6 1497 aa16.35■□□□□ 0.21
RBM28-202ENST00000415472 PZPP20742 1482 aa16.34■□□□□ 0.21
RBM28-202ENST00000415472 NUP160Q12769 1436 aa16.33■□□□□ 0.21
RBM28-202ENST00000415472 NCOA1Q15788 1441 aa16.33■□□□□ 0.2
RBM28-202ENST00000415472 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
RBM28-202ENST00000415472 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
RBM28-202ENST00000415472 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
RBM28-202ENST00000415472 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
RBM28-202ENST00000415472 CARMIL2Q6F5E8 1435 aa16.29■□□□□ 0.2
RBM28-202ENST00000415472 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
RBM28-202ENST00000415472 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.2
RBM28-202ENST00000415472 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
RBM28-202ENST00000415472 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
RBM28-202ENST00000415472 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
RBM28-202ENST00000415472 ATP10BO94823 1461 aa16.26■□□□□ 0.19
RBM28-202ENST00000415472 SPATA31E1Q6ZUB1 1445 aa16.26■□□□□ 0.19
RBM28-202ENST00000415472 ABCA8O94911 1581 aa16.25■□□□□ 0.19
RBM28-202ENST00000415472 ADGRL2O95490 1459 aa16.25■□□□□ 0.19
RBM28-202ENST00000415472 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
RBM28-202ENST00000415472 PKD2Q13563 968 aa16.24■□□□□ 0.19
RBM28-202ENST00000415472 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
RBM28-202ENST00000415472 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
RBM28-202ENST00000415472 PLEKHD1A6NEE1 506 aa16.22■□□□□ 0.19
RBM28-202ENST00000415472 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
RBM28-202ENST00000415472 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
RBM28-202ENST00000415472 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.18
RBM28-202ENST00000415472 NEFLP07196 543 aa16.2■□□□□ 0.18
RBM28-202ENST00000415472 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
RBM28-202ENST00000415472 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
RBM28-202ENST00000415472 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
RBM28-202ENST00000415472 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
RBM28-202ENST00000415472 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
RBM28-202ENST00000415472 NUP155O75694 1391 aa16.16■□□□□ 0.18
RBM28-202ENST00000415472 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
RBM28-202ENST00000415472 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
RBM28-202ENST00000415472 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
RBM28-202ENST00000415472 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
RBM28-202ENST00000415472 PTPRGP23470 1445 aa16.13■□□□□ 0.17
RBM28-202ENST00000415472 USP47Q96K76 1375 aa16.13■□□□□ 0.17
RBM28-202ENST00000415472 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
RBM28-202ENST00000415472 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
RBM28-202ENST00000415472 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
RBM28-202ENST00000415472 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
RBM28-202ENST00000415472 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
RBM28-202ENST00000415472 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
RBM28-202ENST00000415472 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
RBM28-202ENST00000415472 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
RBM28-202ENST00000415472 SAMD9LQ8IVG5 1584 aa16.09■□□□□ 0.17
RBM28-202ENST00000415472 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
RBM28-202ENST00000415472 KDM5CP41229 1560 aa16.08■□□□□ 0.17
RBM28-202ENST00000415472 KDM2AQ9Y2K7 1162 aa16.07■□□□□ 0.16
RBM28-202ENST00000415472 CHD1O14646 1710 aa16.06■□□□□ 0.16
RBM28-202ENST00000415472 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
RBM28-202ENST00000415472 KDM5DQ9BY66 1539 aa16.06■□□□□ 0.16
RBM28-202ENST00000415472 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
RBM28-202ENST00000415472 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
RBM28-202ENST00000415472 PREX2Q70Z35 1606 aa16.04■□□□□ 0.16
RBM28-202ENST00000415472 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
RBM28-202ENST00000415472 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
RBM28-202ENST00000415472 TTC37Q6PGP7 1564 aa16.03■□□□□ 0.16
RBM28-202ENST00000415472 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
RBM28-202ENST00000415472 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
RBM28-202ENST00000415472 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
RBM28-202ENST00000415472 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
RBM28-202ENST00000415472 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
RBM28-202ENST00000415472 ARHGEF12Q9NZN5 1544 aa16.01■□□□□ 0.15
RBM28-202ENST00000415472 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
RBM28-202ENST00000415472 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
RBM28-202ENST00000415472 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
RBM28-202ENST00000415472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■■■□ 26.2
RBM28-202ENST00000415472 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
RBM28-202ENST00000415472 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
RBM28-202ENST00000415472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■■□□ 17.8
RBM28-202ENST00000415472 PLA2R1Q13018 1463 aa15.96■□□□□ 0.15
RBM28-202ENST00000415472 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms