RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 L3MBTL2Q969R5 705 aa20.61■□□□□ 0.89
PRKD1-202ENST00000415220 TSHZ2Q9NRE2 1034 aa20.6■□□□□ 0.89
PRKD1-202ENST00000415220 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
PRKD1-202ENST00000415220 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
PRKD1-202ENST00000415220 C11orf95C9JLR9 678 aaPredicted RBP20.57■□□□□ 0.88
PRKD1-202ENST00000415220 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
PRKD1-202ENST00000415220 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
PRKD1-202ENST00000415220 NBPF8Q3BBV2 869 aa20.54■□□□□ 0.88
PRKD1-202ENST00000415220 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
PRKD1-202ENST00000415220 FBLN2P98095 1184 aa20.52■□□□□ 0.88
PRKD1-202ENST00000415220 KIF14Q15058 1648 aa20.52■□□□□ 0.88
PRKD1-202ENST00000415220 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
PRKD1-202ENST00000415220 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
PRKD1-202ENST00000415220 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
PRKD1-202ENST00000415220 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
PRKD1-202ENST00000415220 RPRD2Q5VT52 1461 aaKnown RBP20.49■□□□□ 0.87
PRKD1-202ENST00000415220 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
PRKD1-202ENST00000415220 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
PRKD1-202ENST00000415220 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
PRKD1-202ENST00000415220 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
PRKD1-202ENST00000415220 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
PRKD1-202ENST00000415220 TROQ12816 1431 aaPredicted RBP20.46■□□□□ 0.87
PRKD1-202ENST00000415220 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRKD1-202ENST00000415220 CFDP1Q9UEE9 299 aaPredicted RBP20.45■□□□□ 0.86
PRKD1-202ENST00000415220 PZPP20742 1482 aa20.45■□□□□ 0.86
PRKD1-202ENST00000415220 GPATCH8Q9UKJ3 1502 aaKnown RBP20.45■□□□□ 0.86
PRKD1-202ENST00000415220 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
PRKD1-202ENST00000415220 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
PRKD1-202ENST00000415220 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
PRKD1-202ENST00000415220 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
PRKD1-202ENST00000415220 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
PRKD1-202ENST00000415220 CCDC7Q96M83 1385 aa20.42■□□□□ 0.86
PRKD1-202ENST00000415220 NEFLP07196 543 aa20.4■□□□□ 0.86
PRKD1-202ENST00000415220 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.85
PRKD1-202ENST00000415220 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
PRKD1-202ENST00000415220 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
PRKD1-202ENST00000415220 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
PRKD1-202ENST00000415220 CROCC2H7BZ55 1655 aa20.38■□□□□ 0.85
PRKD1-202ENST00000415220 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
PRKD1-202ENST00000415220 SPATA31E1Q6ZUB1 1445 aa20.37■□□□□ 0.85
PRKD1-202ENST00000415220 KIF7Q2M1P5 1343 aa20.36■□□□□ 0.85
PRKD1-202ENST00000415220 PRKRIP1Q9H875 184 aaPredicted RBP20.34■□□□□ 0.85
PRKD1-202ENST00000415220 NUP160Q12769 1436 aa20.34■□□□□ 0.85
PRKD1-202ENST00000415220 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
PRKD1-202ENST00000415220 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.84
PRKD1-202ENST00000415220 PKD2Q13563 968 aa20.32■□□□□ 0.84
PRKD1-202ENST00000415220 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
PRKD1-202ENST00000415220 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
PRKD1-202ENST00000415220 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
PRKD1-202ENST00000415220 CARMIL2Q6F5E8 1435 aa20.31■□□□□ 0.84
PRKD1-202ENST00000415220 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
PRKD1-202ENST00000415220 KIAA1107Q9UPP5 1409 aa20.3■□□□□ 0.84
PRKD1-202ENST00000415220 ATP10BO94823 1461 aa20.29■□□□□ 0.84
PRKD1-202ENST00000415220 ABCA8O94911 1581 aa20.29■□□□□ 0.84
PRKD1-202ENST00000415220 BCORL1Q5H9F3 1711 aa20.28■□□□□ 0.84
PRKD1-202ENST00000415220 POLR1AO95602 1720 aaPredicted RBP20.28■□□□□ 0.84
PRKD1-202ENST00000415220 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
PRKD1-202ENST00000415220 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
PRKD1-202ENST00000415220 ANKRD50Q9ULJ7 1429 aa20.26■□□□□ 0.83
PRKD1-202ENST00000415220 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
PRKD1-202ENST00000415220 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
PRKD1-202ENST00000415220 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
PRKD1-202ENST00000415220 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
PRKD1-202ENST00000415220 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
PRKD1-202ENST00000415220 USP47Q96K76 1375 aa20.22■□□□□ 0.83
PRKD1-202ENST00000415220 NUP155O75694 1391 aa20.22■□□□□ 0.83
PRKD1-202ENST00000415220 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
PRKD1-202ENST00000415220 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
PRKD1-202ENST00000415220 KDM5CP41229 1560 aa20.19■□□□□ 0.82
PRKD1-202ENST00000415220 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
PRKD1-202ENST00000415220 MYT1Q01538 1121 aa20.16■□□□□ 0.82
PRKD1-202ENST00000415220 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
PRKD1-202ENST00000415220 SHANK2Q9UPX8 1470 aa20.15■□□□□ 0.82
PRKD1-202ENST00000415220 KIF15Q9NS87 1388 aa20.14■□□□□ 0.81
PRKD1-202ENST00000415220 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
PRKD1-202ENST00000415220 CDC42BPBQ9Y5S2 1711 aa20.12■□□□□ 0.81
PRKD1-202ENST00000415220 TSPY4P0CV99 314 aa20.12■□□□□ 0.81
PRKD1-202ENST00000415220 TSPY10P0CW01 314 aa20.12■□□□□ 0.81
PRKD1-202ENST00000415220 ZBED9Q6R2W3 1325 aa20.11■□□□□ 0.81
PRKD1-202ENST00000415220 PTPRGP23470 1445 aa20.1■□□□□ 0.81
PRKD1-202ENST00000415220 KDM5DQ9BY66 1539 aa20.09■□□□□ 0.81
PRKD1-202ENST00000415220 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
PRKD1-202ENST00000415220 RALGAPBQ86X10 1494 aa20.09■□□□□ 0.81
PRKD1-202ENST00000415220 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
PRKD1-202ENST00000415220 DCAF11Q8TEB1 546 aa20.07■□□□□ 0.8
PRKD1-202ENST00000415220 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
PRKD1-202ENST00000415220 PREX2Q70Z35 1606 aa20.06■□□□□ 0.8
PRKD1-202ENST00000415220 ST20-MTHFSA0A0A6YYL1 179 aa20.05■□□□□ 0.8
PRKD1-202ENST00000415220 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
PRKD1-202ENST00000415220 CHD1O14646 1710 aa20.05■□□□□ 0.8
PRKD1-202ENST00000415220 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
PRKD1-202ENST00000415220 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
PRKD1-202ENST00000415220 SYCP2Q9BX26 1530 aa20.03■□□□□ 0.8
PRKD1-202ENST00000415220 FAM135AQ9P2D6 1515 aa20.03■□□□□ 0.8
PRKD1-202ENST00000415220 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
PRKD1-202ENST00000415220 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
PRKD1-202ENST00000415220 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
PRKD1-202ENST00000415220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
PRKD1-202ENST00000415220 PPP4R2Q9NY27 417 aa19.99■□□□□ 0.79
PRKD1-202ENST00000415220 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms