RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MAGI1Q96QZ7 1491 aaPredicted RBP8.34□□□□□ -1.07
VPS41-205ENST00000414632 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
VPS41-205ENST00000414632 RIMBP3CA6NJZ7 1639 aa8.32□□□□□ -1.08
VPS41-205ENST00000414632 RIMBP3BA6NNM3 1639 aa8.32□□□□□ -1.08
VPS41-205ENST00000414632 RIMBP3Q9UFD9 1639 aa8.32□□□□□ -1.08
VPS41-205ENST00000414632 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
VPS41-205ENST00000414632 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
VPS41-205ENST00000414632 ERICH3Q5RHP9 1530 aa8.3□□□□□ -1.08
VPS41-205ENST00000414632 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
VPS41-205ENST00000414632 CEP170Q5SW79 1584 aa8.28□□□□□ -1.08
VPS41-205ENST00000414632 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
VPS41-205ENST00000414632 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
VPS41-205ENST00000414632 CUL7Q14999 1698 aa8.27□□□□□ -1.08
VPS41-205ENST00000414632 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
VPS41-205ENST00000414632 KIF27Q86VH2 1401 aa8.27□□□□□ -1.09
VPS41-205ENST00000414632 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
VPS41-205ENST00000414632 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
VPS41-205ENST00000414632 FXR2P51116 673 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS41-205ENST00000414632 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
VPS41-205ENST00000414632 CHADLQ6NUI6 762 aa8.24□□□□□ -1.09
VPS41-205ENST00000414632 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
VPS41-205ENST00000414632 IGF1RP08069 1367 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
VPS41-205ENST00000414632 CADPS2Q86UW7 1296 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 P3H3Q8IVL6 736 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 PIP4P2Q8N4L2 257 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 PCDHB8Q9UN66 801 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 PCDHB13Q9Y5F0 798 aa8.22□□□□□ -1.09
VPS41-205ENST00000414632 NUP160Q12769 1436 aa8.21□□□□□ -1.09
VPS41-205ENST00000414632 FARP1Q9Y4F1 1045 aaPredicted RBP8.21□□□□□ -1.1
VPS41-205ENST00000414632 SHROOM2Q13796 1616 aa8.21□□□□□ -1.1
VPS41-205ENST00000414632 ARAP1Q96P48 1450 aa8.2□□□□□ -1.1
VPS41-205ENST00000414632 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
VPS41-205ENST00000414632 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
VPS41-205ENST00000414632 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
VPS41-205ENST00000414632 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
VPS41-205ENST00000414632 PSEN1P49768 467 aa8.17□□□□□ -1.1
VPS41-205ENST00000414632 FAM9AQ8IZU1 332 aaPredicted RBP8.16□□□□□ -1.1
VPS41-205ENST00000414632 KCNV2Q8TDN2 545 aa8.16□□□□□ -1.1
VPS41-205ENST00000414632 MFRPQ9BY79 579 aa8.16□□□□□ -1.1
VPS41-205ENST00000414632 CCDC61Q9Y6R9 512 aa8.16□□□□□ -1.1
VPS41-205ENST00000414632 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
VPS41-205ENST00000414632 ZNF579Q8NAF0 562 aaKnown RBP8.15□□□□□ -1.1
VPS41-205ENST00000414632 IQGAP2Q13576 1575 aa8.14□□□□□ -1.11
VPS41-205ENST00000414632 PRG4Q92954 1404 aaPredicted RBP8.14□□□□□ -1.11
VPS41-205ENST00000414632 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
VPS41-205ENST00000414632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
VPS41-205ENST00000414632 JPH4Q96JJ6 628 aa8.12□□□□□ -1.11
VPS41-205ENST00000414632 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
VPS41-205ENST00000414632 LMOD2Q6P5Q4 547 aa8.11□□□□□ -1.11
VPS41-205ENST00000414632 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
VPS41-205ENST00000414632 PRXQ9BXM0 1461 aa8.11□□□□□ -1.11
VPS41-205ENST00000414632 PPP1R37O75864 691 aa8.1□□□□□ -1.11
VPS41-205ENST00000414632 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
VPS41-205ENST00000414632 IFNL1Q8IU54 200 aa8.09□□□□□ -1.11
VPS41-205ENST00000414632 EFCAB3Q8N7B9 438 aa8.09□□□□□ -1.11
VPS41-205ENST00000414632 KIAA0556O60303 1618 aa8.08□□□□□ -1.12
VPS41-205ENST00000414632 NLRP6P59044 892 aa8.08□□□□□ -1.12
VPS41-205ENST00000414632 EEA1Q15075 1411 aa8.08□□□□□ -1.12
VPS41-205ENST00000414632 KIF21BO75037 1637 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 MAP3K13O43283 966 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 PAK3O75914 559 aaPredicted RBP8.07□□□□□ -1.12
VPS41-205ENST00000414632 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
VPS41-205ENST00000414632 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 DISP1Q96F81 1524 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
VPS41-205ENST00000414632 SOX12O15370 315 aa8.06□□□□□ -1.12
VPS41-205ENST00000414632 KIF12Q96FN5 646 aa8.06□□□□□ -1.12
VPS41-205ENST00000414632 CABP2Q9NPB3 220 aa8.06□□□□□ -1.12
VPS41-205ENST00000414632 UGGT2Q9NYU1 1516 aa8.06□□□□□ -1.12
VPS41-205ENST00000414632 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
VPS41-205ENST00000414632 E2F4Q16254 413 aa8.05□□□□□ -1.12
VPS41-205ENST00000414632 PHF8Q9UPP1 1060 aa8.05□□□□□ -1.12
VPS41-205ENST00000414632 CARMIL2Q6F5E8 1435 aa8.04□□□□□ -1.12
VPS41-205ENST00000414632 KIF13AQ9H1H9 1805 aa8.03□□□□□ -1.12
VPS41-205ENST00000414632 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
VPS41-205ENST00000414632 PTPRGP23470 1445 aa8.02□□□□□ -1.13
VPS41-205ENST00000414632 SAMD9Q5K651 1589 aa8.01□□□□□ -1.13
VPS41-205ENST00000414632 GOLGA3Q08378 1498 aa8□□□□□ -1.13
VPS41-205ENST00000414632 SEMA3EO15041 775 aa8□□□□□ -1.13
VPS41-205ENST00000414632 ZCCHC11Q5TAX3 1644 aaKnown RBP8□□□□□ -1.13
VPS41-205ENST00000414632 TESPA1A2RU30 521 aaPredicted RBP7.99□□□□□ -1.13
VPS41-205ENST00000414632 TSPOAP1O95153 1857 aa7.99□□□□□ -1.13
VPS41-205ENST00000414632 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
VPS41-205ENST00000414632 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
VPS41-205ENST00000414632 ABCC2Q92887 1545 aa7.98□□□□□ -1.13
VPS41-205ENST00000414632 C19orf67A6NJJ6 358 aa7.98□□□□□ -1.13
VPS41-205ENST00000414632 CD44P16070 742 aaKnown RBP7.98□□□□□ -1.13
VPS41-205ENST00000414632 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
VPS41-205ENST00000414632 LARP6Q9BRS8 491 aaKnown RBP7.98□□□□□ -1.13
VPS41-205ENST00000414632 PLB1Q6P1J6 1458 aa7.98□□□□□ -1.13
VPS41-205ENST00000414632 NCKAP5LQ9HCH0 1330 aa7.98□□□□□ -1.13
VPS41-205ENST00000414632 FHOD3Q2V2M9 1422 aa7.97□□□□□ -1.13
VPS41-205ENST00000414632 UACAQ9BZF9 1416 aa7.97□□□□□ -1.13
VPS41-205ENST00000414632 PDE4AP27815 886 aa7.97□□□□□ -1.13
VPS41-205ENST00000414632 ABCA8O94911 1581 aa7.97□□□□□ -1.13
VPS41-205ENST00000414632 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms