RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 KDM6BO15054 1643 aa16.26■□□□□ 0.19
TRAFD1-202ENST00000412615 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
TRAFD1-202ENST00000412615 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
TRAFD1-202ENST00000412615 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-202ENST00000412615 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-202ENST00000412615 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
TRAFD1-202ENST00000412615 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-202ENST00000412615 ANP32CO43423 234 aa16.21■□□□□ 0.18
TRAFD1-202ENST00000412615 KCNH8Q96L42 1107 aa16.21■□□□□ 0.18
TRAFD1-202ENST00000412615 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-202ENST00000412615 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
TRAFD1-202ENST00000412615 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
TRAFD1-202ENST00000412615 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
TRAFD1-202ENST00000412615 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
TRAFD1-202ENST00000412615 PLEKHD1A6NEE1 506 aa16.18■□□□□ 0.18
TRAFD1-202ENST00000412615 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
TRAFD1-202ENST00000412615 ABCA8O94911 1581 aa16.16■□□□□ 0.18
TRAFD1-202ENST00000412615 FOXD1Q16676 465 aa16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 KIF14Q15058 1648 aa16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 L3MBTL2Q969R5 705 aa16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
TRAFD1-202ENST00000412615 RPRD2Q5VT52 1461 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-202ENST00000412615 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRAFD1-202ENST00000412615 ATP10BO94823 1461 aa16.13■□□□□ 0.17
TRAFD1-202ENST00000412615 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
TRAFD1-202ENST00000412615 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
TRAFD1-202ENST00000412615 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
TRAFD1-202ENST00000412615 ADGBQ8N7X0 1667 aa16.11■□□□□ 0.17
TRAFD1-202ENST00000412615 PTPRGP23470 1445 aa16.09■□□□□ 0.17
TRAFD1-202ENST00000412615 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.17
TRAFD1-202ENST00000412615 SUPT16HQ9Y5B9 1047 aaKnown RBP16.08■□□□□ 0.16
TRAFD1-202ENST00000412615 PZPP20742 1482 aa16.08■□□□□ 0.16
TRAFD1-202ENST00000412615 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
TRAFD1-202ENST00000412615 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
TRAFD1-202ENST00000412615 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
TRAFD1-202ENST00000412615 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
TRAFD1-202ENST00000412615 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
TRAFD1-202ENST00000412615 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
TRAFD1-202ENST00000412615 KIAA1107Q9UPP5 1409 aa16.04■□□□□ 0.16
TRAFD1-202ENST00000412615 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
TRAFD1-202ENST00000412615 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
TRAFD1-202ENST00000412615 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
TRAFD1-202ENST00000412615 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.16
TRAFD1-202ENST00000412615 PKD2Q13563 968 aa16.01■□□□□ 0.15
TRAFD1-202ENST00000412615 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
TRAFD1-202ENST00000412615 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
TRAFD1-202ENST00000412615 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
TRAFD1-202ENST00000412615 ARHGEF5Q12774 1597 aa15.97■□□□□ 0.15
TRAFD1-202ENST00000412615 NUP155O75694 1391 aa15.97■□□□□ 0.15
TRAFD1-202ENST00000412615 CHD1O14646 1710 aa15.97■□□□□ 0.15
TRAFD1-202ENST00000412615 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAFD1-202ENST00000412615 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
TRAFD1-202ENST00000412615 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-202ENST00000412615 MBD5Q9P267 1494 aa15.95■□□□□ 0.14
TRAFD1-202ENST00000412615 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
TRAFD1-202ENST00000412615 KIF15Q9NS87 1388 aa15.94■□□□□ 0.14
TRAFD1-202ENST00000412615 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
TRAFD1-202ENST00000412615 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
TRAFD1-202ENST00000412615 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
TRAFD1-202ENST00000412615 SAMD9LQ8IVG5 1584 aa15.91■□□□□ 0.14
TRAFD1-202ENST00000412615 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
TRAFD1-202ENST00000412615 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
TRAFD1-202ENST00000412615 NEFLP07196 543 aa15.89■□□□□ 0.13
TRAFD1-202ENST00000412615 FKBP8Q14318 412 aa15.88■□□□□ 0.13
TRAFD1-202ENST00000412615 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-202ENST00000412615 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
TRAFD1-202ENST00000412615 UHRF1BP1Q6BDS2 1440 aa15.87■□□□□ 0.13
TRAFD1-202ENST00000412615 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAFD1-202ENST00000412615 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-202ENST00000412615 POLR1AO95602 1720 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-202ENST00000412615 ARHGAP5Q13017 1502 aa15.86■□□□□ 0.13
TRAFD1-202ENST00000412615 USP47Q96K76 1375 aa15.86■□□□□ 0.13
TRAFD1-202ENST00000412615 ARHGEF12Q9NZN5 1544 aa15.86■□□□□ 0.13
TRAFD1-202ENST00000412615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRAFD1-202ENST00000412615 ARID4BQ4LE39 1312 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-202ENST00000412615 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
TRAFD1-202ENST00000412615 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
TRAFD1-202ENST00000412615 TTC37Q6PGP7 1564 aa15.84■□□□□ 0.13
TRAFD1-202ENST00000412615 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
TRAFD1-202ENST00000412615 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.13
TRAFD1-202ENST00000412615 RALGAPBQ86X10 1494 aa15.83■□□□□ 0.12
TRAFD1-202ENST00000412615 FAM135AQ9P2D6 1515 aa15.82■□□□□ 0.12
TRAFD1-202ENST00000412615 KDM5CP41229 1560 aa15.8■□□□□ 0.12
TRAFD1-202ENST00000412615 MRS2Q9HD23 443 aa15.8■□□□□ 0.12
TRAFD1-202ENST00000412615 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
TRAFD1-202ENST00000412615 CCDC184Q52MB2 194 aa15.8■□□□□ 0.12
TRAFD1-202ENST00000412615 CARD11Q9BXL7 1154 aa15.8■□□□□ 0.12
TRAFD1-202ENST00000412615 BCANQ96GW7 911 aa15.79■□□□□ 0.12
TRAFD1-202ENST00000412615 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
TRAFD1-202ENST00000412615 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
TRAFD1-202ENST00000412615 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
TRAFD1-202ENST00000412615 KDM2AQ9Y2K7 1162 aa15.78■□□□□ 0.12
TRAFD1-202ENST00000412615 PLCH2O75038 1416 aa15.77■□□□□ 0.12
TRAFD1-202ENST00000412615 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.11
TRAFD1-202ENST00000412615 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.11
TRAFD1-202ENST00000412615 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
TRAFD1-202ENST00000412615 CCDC144AA2RUR9 1427 aa15.76■□□□□ 0.11
TRAFD1-202ENST00000412615 UNC13BO14795 1591 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms