RNA–Protein interactions for RNA: ENST00000411857.2

HNRNPA1P54-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 54, humanhuman

BASIC

Gene HNRNPA1P54, Length 9,714 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P54-201ENST00000411857 CCDC34Q96HJ3 373 aa9.85□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 SYAP1Q96A49 352 aaPredicted RBP9.85□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 FHAD1B1AJZ9 1412 aa9.85□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 CCNB3Q8WWL7 1395 aa9.84□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 CC2D1BQ5T0F9 858 aaKnown RBP9.84□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
HNRNPA1P54-201ENST00000411857 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 GBP4Q96PP9 640 aa9.83□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 CHMP4AQ9BY43 222 aa9.83□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 EIF3AQ14152 1382 aaKnown RBP9.82□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 IPO8O15397 1037 aaKnown RBP9.82□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 A0A0U1RQG5 324 aaPredicted RBP9.82□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 MORC1Q86VD1 984 aa9.8□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 HDGFL2Q7Z4V5 671 aaPredicted RBP9.79□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 WRNQ14191 1432 aaPredicted RBP eCLIP9.79□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 SPAG9O60271 1321 aaKnown RBP9.77□□□□□ -0.84
HNRNPA1P54-201ENST00000411857 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 PHF14O94880 888 aa9.77□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 CEP89Q96ST8 783 aa9.76□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 G3V3G9 751 aa9.75□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 TAF7LQ5H9L4 462 aa9.74□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 TNNT3P45378 269 aaPredicted RBP9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 SOX12O15370 315 aa9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 RWDD1Q9H446 243 aaPredicted RBP9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 ROCK2O75116 1388 aaKnown RBP9.73□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 DCAF11Q8TEB1 546 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 BAZ1AQ9NRL2 1556 aaPredicted RBP9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 TPM3P06753 285 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 SENP3-EIF4A1A0A087X0R7 540 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 HMMRO75330 724 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 TNIKQ9UKE5 1360 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 STK31Q9BXU1 1019 aa9.72□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 TRHP20396 242 aaPredicted RBP9.71□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 CHMP3Q9Y3E7 222 aa9.71□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 KIF3AQ9Y496 699 aa9.71□□□□□ -0.85
HNRNPA1P54-201ENST00000411857 PMFBP1Q8TBY8 1022 aa9.71□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TPM2P07951 284 aa9.7□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 VPS53Q5VIR6 699 aa9.7□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 APBB1O00213 710 aa9.69□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CHMP4CQ96CF2 233 aa9.69□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TSR1Q2NL82 804 aaKnown RBP9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 KIF16BQ96L93 1317 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CCDC70Q6NSX1 233 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 B4GALNT3Q6L9W6 998 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 LMOD3Q0VAK6 560 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 MLECQ14165 292 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TCEAL9Q9UHQ7 104 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 MARCH6O60337 910 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 RALBP1Q15311 655 aa9.68□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 SETD5Q9C0A6 1442 aa9.67□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TCERG1O14776 1098 aaKnown RBP9.67□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 PDE4CQ08493 712 aa9.67□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 SAFB2Q14151 953 aaKnown RBP eCLIP9.67□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 CREBRFQ8IUR6 639 aa9.66□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 TPM1P09493 284 aa9.66□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 STK26Q9P289 416 aa9.65□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 ST18O60284 1047 aa9.65□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 GOLGA6L3A6NEY3 463 aa9.65□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.86
HNRNPA1P54-201ENST00000411857 PRDM2Q13029 1718 aa9.65□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 TERF2IPQ9NYB0 399 aa9.65□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 TIMELESSQ9UNS1 1208 aa9.64□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 FRAT2O75474 233 aaPredicted RBP9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 RCAN3Q9UKA8 241 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 H3BQV1 296 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 CUX2O14529 1486 aa9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 AKAP17AQ02040 695 aaKnown RBP9.62□□□□□ -0.87
HNRNPA1P54-201ENST00000411857 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms