RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 STK26Q9P289 416 aa12.06□□□□□ -0.48
ITGB6-202ENST00000409583 CDCA8Q53HL2 280 aa12.05□□□□□ -0.48
ITGB6-202ENST00000409583 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
ITGB6-202ENST00000409583 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
ITGB6-202ENST00000409583 NAP1L5Q96NT1 182 aaPredicted RBP12.04□□□□□ -0.48
ITGB6-202ENST00000409583 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
ITGB6-202ENST00000409583 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
ITGB6-202ENST00000409583 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
ITGB6-202ENST00000409583 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
ITGB6-202ENST00000409583 SOX12O15370 315 aa12.03□□□□□ -0.48
ITGB6-202ENST00000409583 NUTM2DQ5VT03 806 aaPredicted RBP12.03□□□□□ -0.48
ITGB6-202ENST00000409583 CFTRP13569 1480 aa12.03□□□□□ -0.48
ITGB6-202ENST00000409583 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.49
ITGB6-202ENST00000409583 L3MBTL2Q969R5 705 aa12.01□□□□□ -0.49
ITGB6-202ENST00000409583 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
ITGB6-202ENST00000409583 SYNJ1O43426 1573 aa12□□□□□ -0.49
ITGB6-202ENST00000409583 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
ITGB6-202ENST00000409583 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
ITGB6-202ENST00000409583 TMF1P82094 1093 aa11.99□□□□□ -0.49
ITGB6-202ENST00000409583 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
ITGB6-202ENST00000409583 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
ITGB6-202ENST00000409583 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
ITGB6-202ENST00000409583 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
ITGB6-202ENST00000409583 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
ITGB6-202ENST00000409583 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
ITGB6-202ENST00000409583 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
ITGB6-202ENST00000409583 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
ITGB6-202ENST00000409583 CDK11BP21127 795 aaKnown RBP11.96□□□□□ -0.49
ITGB6-202ENST00000409583 HSP90AA1P07900 732 aaKnown RBP11.96□□□□□ -0.5
ITGB6-202ENST00000409583 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
ITGB6-202ENST00000409583 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
ITGB6-202ENST00000409583 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
ITGB6-202ENST00000409583 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
ITGB6-202ENST00000409583 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
ITGB6-202ENST00000409583 POLA1P09884 1462 aaPredicted RBP11.91□□□□□ -0.5
ITGB6-202ENST00000409583 CUX1P39880 1505 aa11.91□□□□□ -0.5
ITGB6-202ENST00000409583 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
ITGB6-202ENST00000409583 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
ITGB6-202ENST00000409583 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
ITGB6-202ENST00000409583 KIF21BO75037 1637 aa11.9□□□□□ -0.5
ITGB6-202ENST00000409583 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
ITGB6-202ENST00000409583 NUTM2FA1L443 756 aa11.9□□□□□ -0.51
ITGB6-202ENST00000409583 ARAP1Q96P48 1450 aa11.9□□□□□ -0.51
ITGB6-202ENST00000409583 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
ITGB6-202ENST00000409583 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
ITGB6-202ENST00000409583 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
ITGB6-202ENST00000409583 ARXQ96QS3 562 aa11.89□□□□□ -0.51
ITGB6-202ENST00000409583 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
ITGB6-202ENST00000409583 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
ITGB6-202ENST00000409583 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
ITGB6-202ENST00000409583 ANP32BQ92688 251 aaKnown RBP11.87□□□□□ -0.51
ITGB6-202ENST00000409583 PDE4CQ08493 712 aa11.87□□□□□ -0.51
ITGB6-202ENST00000409583 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
ITGB6-202ENST00000409583 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
ITGB6-202ENST00000409583 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
ITGB6-202ENST00000409583 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
ITGB6-202ENST00000409583 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
ITGB6-202ENST00000409583 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
ITGB6-202ENST00000409583 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
ITGB6-202ENST00000409583 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
ITGB6-202ENST00000409583 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
ITGB6-202ENST00000409583 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
ITGB6-202ENST00000409583 TRIM44Q96DX7 344 aaPredicted RBP11.82□□□□□ -0.52
ITGB6-202ENST00000409583 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
ITGB6-202ENST00000409583 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
ITGB6-202ENST00000409583 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
ITGB6-202ENST00000409583 LRRC9Q6ZRR7 1453 aa11.82□□□□□ -0.52
ITGB6-202ENST00000409583 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
ITGB6-202ENST00000409583 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
ITGB6-202ENST00000409583 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
ITGB6-202ENST00000409583 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
ITGB6-202ENST00000409583 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
ITGB6-202ENST00000409583 HDGFL2Q7Z4V5 671 aaPredicted RBP11.8□□□□□ -0.52
ITGB6-202ENST00000409583 PNNQ9H307 717 aaKnown RBP11.8□□□□□ -0.52
ITGB6-202ENST00000409583 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
ITGB6-202ENST00000409583 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
ITGB6-202ENST00000409583 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
ITGB6-202ENST00000409583 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
ITGB6-202ENST00000409583 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
ITGB6-202ENST00000409583 CASKIN1Q8WXD9 1431 aa11.79□□□□□ -0.52
ITGB6-202ENST00000409583 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
ITGB6-202ENST00000409583 IFT140Q96RY7 1462 aa11.79□□□□□ -0.52
ITGB6-202ENST00000409583 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
ITGB6-202ENST00000409583 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
ITGB6-202ENST00000409583 CCER2I3L3R5 266 aa11.77□□□□□ -0.52
ITGB6-202ENST00000409583 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
ITGB6-202ENST00000409583 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.53
ITGB6-202ENST00000409583 RGS3P49796 1198 aa11.77□□□□□ -0.53
ITGB6-202ENST00000409583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
ITGB6-202ENST00000409583 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
ITGB6-202ENST00000409583 ANKRD50Q9ULJ7 1429 aa11.74□□□□□ -0.53
ITGB6-202ENST00000409583 NGDNQ8NEJ9 315 aaKnown RBP11.73□□□□□ -0.53
ITGB6-202ENST00000409583 PANK3Q9H999 370 aa11.73□□□□□ -0.53
ITGB6-202ENST00000409583 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
ITGB6-202ENST00000409583 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
ITGB6-202ENST00000409583 UNC13AQ9UPW8 1703 aa11.73□□□□□ -0.53
ITGB6-202ENST00000409583 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
ITGB6-202ENST00000409583 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
ITGB6-202ENST00000409583 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.53
ITGB6-202ENST00000409583 ZMYND15Q9H091 742 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms