RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
VWA3B-201ENST00000409460 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
VWA3B-201ENST00000409460 KIF14Q15058 1648 aa13.68□□□□□ -0.22
VWA3B-201ENST00000409460 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
VWA3B-201ENST00000409460 PTPRMP28827 1452 aa13.68□□□□□ -0.22
VWA3B-201ENST00000409460 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
VWA3B-201ENST00000409460 CCNB3Q8WWL7 1395 aa13.67□□□□□ -0.22
VWA3B-201ENST00000409460 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
VWA3B-201ENST00000409460 ATP10AO60312 1499 aa13.66□□□□□ -0.22
VWA3B-201ENST00000409460 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
VWA3B-201ENST00000409460 SPAG9O60271 1321 aaKnown RBP13.65□□□□□ -0.22
VWA3B-201ENST00000409460 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
VWA3B-201ENST00000409460 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
VWA3B-201ENST00000409460 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
VWA3B-201ENST00000409460 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
VWA3B-201ENST00000409460 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
VWA3B-201ENST00000409460 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
VWA3B-201ENST00000409460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.23
VWA3B-201ENST00000409460 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
VWA3B-201ENST00000409460 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
VWA3B-201ENST00000409460 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
VWA3B-201ENST00000409460 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
VWA3B-201ENST00000409460 RSPH4AQ5TD94 716 aa13.58□□□□□ -0.24
VWA3B-201ENST00000409460 HSPA2P54652 639 aa13.57□□□□□ -0.24
VWA3B-201ENST00000409460 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
VWA3B-201ENST00000409460 HRCP23327 699 aa13.56□□□□□ -0.24
VWA3B-201ENST00000409460 ZMYM4Q5VZL5 1548 aa13.56□□□□□ -0.24
VWA3B-201ENST00000409460 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
VWA3B-201ENST00000409460 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
VWA3B-201ENST00000409460 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
VWA3B-201ENST00000409460 YEATS2Q9ULM3 1422 aa13.54□□□□□ -0.24
VWA3B-201ENST00000409460 GGT6Q6P531 493 aa13.54□□□□□ -0.24
VWA3B-201ENST00000409460 MADDQ8WXG6 1647 aa13.52□□□□□ -0.24
VWA3B-201ENST00000409460 CERKQ8TCT0 537 aa13.52□□□□□ -0.24
VWA3B-201ENST00000409460 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.24
VWA3B-201ENST00000409460 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.24
VWA3B-201ENST00000409460 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.24
VWA3B-201ENST00000409460 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
VWA3B-201ENST00000409460 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
VWA3B-201ENST00000409460 CEBPAP49715 358 aaPredicted RBP13.49□□□□□ -0.25
VWA3B-201ENST00000409460 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
VWA3B-201ENST00000409460 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.25
VWA3B-201ENST00000409460 PKD2Q13563 968 aa13.46□□□□□ -0.26
VWA3B-201ENST00000409460 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
VWA3B-201ENST00000409460 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
VWA3B-201ENST00000409460 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
VWA3B-201ENST00000409460 FRMPD1Q5SYB0 1578 aa13.44□□□□□ -0.26
VWA3B-201ENST00000409460 KIF3BO15066 747 aa13.43□□□□□ -0.26
VWA3B-201ENST00000409460 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
VWA3B-201ENST00000409460 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
VWA3B-201ENST00000409460 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
VWA3B-201ENST00000409460 FER1L4A9Z1Z3 1794 aa13.42□□□□□ -0.26
VWA3B-201ENST00000409460 EHBP1L1Q8N3D4 1523 aa13.42□□□□□ -0.26
VWA3B-201ENST00000409460 LMTK3Q96Q04 1460 aa13.41□□□□□ -0.26
VWA3B-201ENST00000409460 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
VWA3B-201ENST00000409460 AGLP35573 1532 aa13.41□□□□□ -0.26
VWA3B-201ENST00000409460 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
VWA3B-201ENST00000409460 ARHGEF12Q9NZN5 1544 aa13.4□□□□□ -0.26
VWA3B-201ENST00000409460 A2MP01023 1474 aa13.4□□□□□ -0.26
VWA3B-201ENST00000409460 ABCC1P33527 1531 aa13.39□□□□□ -0.27
VWA3B-201ENST00000409460 KANK1Q14678 1352 aa13.39□□□□□ -0.27
VWA3B-201ENST00000409460 NPATQ14207 1427 aa13.39□□□□□ -0.27
VWA3B-201ENST00000409460 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
VWA3B-201ENST00000409460 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
VWA3B-201ENST00000409460 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
VWA3B-201ENST00000409460 PTPRTO14522 1441 aa13.38□□□□□ -0.27
VWA3B-201ENST00000409460 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
VWA3B-201ENST00000409460 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
VWA3B-201ENST00000409460 KDM5CP41229 1560 aa13.37□□□□□ -0.27
VWA3B-201ENST00000409460 UBAP1LF5GYI3 381 aa13.36□□□□□ -0.27
VWA3B-201ENST00000409460 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
VWA3B-201ENST00000409460 BCANQ96GW7 911 aa13.36□□□□□ -0.27
VWA3B-201ENST00000409460 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
VWA3B-201ENST00000409460 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
VWA3B-201ENST00000409460 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
VWA3B-201ENST00000409460 TOM1O60784 492 aa13.35□□□□□ -0.27
VWA3B-201ENST00000409460 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
VWA3B-201ENST00000409460 DIP2CQ9Y2E4 1556 aa13.34□□□□□ -0.27
VWA3B-201ENST00000409460 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
VWA3B-201ENST00000409460 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
VWA3B-201ENST00000409460 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
VWA3B-201ENST00000409460 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
VWA3B-201ENST00000409460 DISP3Q9P2K9 1392 aa13.33□□□□□ -0.27
VWA3B-201ENST00000409460 TNRQ92752 1358 aa13.33□□□□□ -0.28
VWA3B-201ENST00000409460 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
VWA3B-201ENST00000409460 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
VWA3B-201ENST00000409460 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
VWA3B-201ENST00000409460 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
VWA3B-201ENST00000409460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
VWA3B-201ENST00000409460 NCOA2Q15596 1464 aa13.29□□□□□ -0.28
VWA3B-201ENST00000409460 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
VWA3B-201ENST00000409460 SUPT6HQ7KZ85 1726 aaKnown RBP13.28□□□□□ -0.28
VWA3B-201ENST00000409460 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
VWA3B-201ENST00000409460 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.29
VWA3B-201ENST00000409460 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
VWA3B-201ENST00000409460 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
VWA3B-201ENST00000409460 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
VWA3B-201ENST00000409460 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
VWA3B-201ENST00000409460 NCOA1Q15788 1441 aa13.25□□□□□ -0.29
VWA3B-201ENST00000409460 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms