RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-204ENST00000405807 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
COL4A3BP-204ENST00000405807 ZBED9Q6R2W3 1325 aa21.9■■□□□ 1.1
COL4A3BP-204ENST00000405807 RSPH6AQ9H0K4 717 aa21.89■■□□□ 1.1
COL4A3BP-204ENST00000405807 BCL11BQ9C0K0 894 aaPredicted RBP21.89■■□□□ 1.09
COL4A3BP-204ENST00000405807 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
COL4A3BP-204ENST00000405807 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
COL4A3BP-204ENST00000405807 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
COL4A3BP-204ENST00000405807 CCDC7Q96M83 1385 aa21.87■■□□□ 1.09
COL4A3BP-204ENST00000405807 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
COL4A3BP-204ENST00000405807 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
COL4A3BP-204ENST00000405807 NCOA1Q15788 1441 aa21.86■■□□□ 1.09
COL4A3BP-204ENST00000405807 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
COL4A3BP-204ENST00000405807 AKNAQ7Z591 1439 aa21.85■■□□□ 1.09
COL4A3BP-204ENST00000405807 LRRIQ1Q96JM4 1722 aa21.85■■□□□ 1.09
COL4A3BP-204ENST00000405807 DENND4BO75064 1496 aaPredicted RBP21.85■■□□□ 1.09
COL4A3BP-204ENST00000405807 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
COL4A3BP-204ENST00000405807 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
COL4A3BP-204ENST00000405807 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
COL4A3BP-204ENST00000405807 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
COL4A3BP-204ENST00000405807 B4GALNT3Q6L9W6 998 aa21.84■■□□□ 1.09
COL4A3BP-204ENST00000405807 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.09
COL4A3BP-204ENST00000405807 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.08
COL4A3BP-204ENST00000405807 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
COL4A3BP-204ENST00000405807 KLHL34Q8N239 644 aa21.79■■□□□ 1.08
COL4A3BP-204ENST00000405807 MAGI3Q5TCQ9 1506 aa21.74■■□□□ 1.07
COL4A3BP-204ENST00000405807 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
COL4A3BP-204ENST00000405807 KDM6BO15054 1643 aa21.72■■□□□ 1.07
COL4A3BP-204ENST00000405807 BRPF3Q9ULD4 1205 aa21.72■■□□□ 1.07
COL4A3BP-204ENST00000405807 KIF7Q2M1P5 1343 aa21.71■■□□□ 1.07
COL4A3BP-204ENST00000405807 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
COL4A3BP-204ENST00000405807 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
COL4A3BP-204ENST00000405807 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
COL4A3BP-204ENST00000405807 FOXD1Q16676 465 aa21.7■■□□□ 1.07
COL4A3BP-204ENST00000405807 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
COL4A3BP-204ENST00000405807 RPRD2Q5VT52 1461 aaKnown RBP21.7■■□□□ 1.06
COL4A3BP-204ENST00000405807 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
COL4A3BP-204ENST00000405807 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
COL4A3BP-204ENST00000405807 SPATA31E1Q6ZUB1 1445 aa21.69■■□□□ 1.06
COL4A3BP-204ENST00000405807 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
COL4A3BP-204ENST00000405807 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
COL4A3BP-204ENST00000405807 NESP48681 1621 aa21.64■■□□□ 1.06
COL4A3BP-204ENST00000405807 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
COL4A3BP-204ENST00000405807 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.05
COL4A3BP-204ENST00000405807 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
COL4A3BP-204ENST00000405807 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
COL4A3BP-204ENST00000405807 RNF123Q5XPI4 1314 aa21.63■■□□□ 1.05
COL4A3BP-204ENST00000405807 WASHC2CQ9Y4E1 1318 aa21.61■■□□□ 1.05
COL4A3BP-204ENST00000405807 POLR1AO95602 1720 aaPredicted RBP21.61■■□□□ 1.05
COL4A3BP-204ENST00000405807 SLC4A1APQ9BWU0 796 aaKnown RBP21.6■■□□□ 1.05
COL4A3BP-204ENST00000405807 ANP32AP39687 249 aaKnown RBP21.59■■□□□ 1.05
COL4A3BP-204ENST00000405807 DAPK1P53355 1430 aa21.57■■□□□ 1.04
COL4A3BP-204ENST00000405807 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
COL4A3BP-204ENST00000405807 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
COL4A3BP-204ENST00000405807 IPO9Q96P70 1041 aaKnown RBP21.56■■□□□ 1.04
COL4A3BP-204ENST00000405807 TAF7LQ5H9L4 462 aa21.56■■□□□ 1.04
COL4A3BP-204ENST00000405807 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
COL4A3BP-204ENST00000405807 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
COL4A3BP-204ENST00000405807 ABCC5O15440 1437 aa21.52■■□□□ 1.04
COL4A3BP-204ENST00000405807 ZBTB47Q9UFB7 747 aaPredicted RBP21.51■■□□□ 1.03
COL4A3BP-204ENST00000405807 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
COL4A3BP-204ENST00000405807 NEFMP07197 916 aa21.5■■□□□ 1.03
COL4A3BP-204ENST00000405807 HSP90AA2PQ14568 343 aaPredicted RBP21.49■■□□□ 1.03
COL4A3BP-204ENST00000405807 WDR62O43379 1518 aa21.48■■□□□ 1.03
COL4A3BP-204ENST00000405807 DNMT1P26358 1616 aaKnown RBP21.48■■□□□ 1.03
COL4A3BP-204ENST00000405807 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
COL4A3BP-204ENST00000405807 USP47Q96K76 1375 aa21.48■■□□□ 1.03
COL4A3BP-204ENST00000405807 IQGAP2Q13576 1575 aa21.48■■□□□ 1.03
COL4A3BP-204ENST00000405807 POLR3GLQ9BT43 218 aa21.47■■□□□ 1.03
COL4A3BP-204ENST00000405807 ARID3CA6NKF2 412 aa21.47■■□□□ 1.03
COL4A3BP-204ENST00000405807 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
COL4A3BP-204ENST00000405807 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
COL4A3BP-204ENST00000405807 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
COL4A3BP-204ENST00000405807 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
COL4A3BP-204ENST00000405807 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
COL4A3BP-204ENST00000405807 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
COL4A3BP-204ENST00000405807 FAM43AQ8N2R8 423 aa21.42■■□□□ 1.02
COL4A3BP-204ENST00000405807 PZPP20742 1482 aa21.42■■□□□ 1.02
COL4A3BP-204ENST00000405807 RRP9O43818 475 aaKnown RBP21.42■■□□□ 1.02
COL4A3BP-204ENST00000405807 USP35Q9P2H5 1018 aa21.41■■□□□ 1.02
COL4A3BP-204ENST00000405807 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
COL4A3BP-204ENST00000405807 BCORL1Q5H9F3 1711 aa21.4■■□□□ 1.02
COL4A3BP-204ENST00000405807 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
COL4A3BP-204ENST00000405807 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
COL4A3BP-204ENST00000405807 KIF15Q9NS87 1388 aa21.37■■□□□ 1.01
COL4A3BP-204ENST00000405807 KIF14Q15058 1648 aa21.36■■□□□ 1.01
COL4A3BP-204ENST00000405807 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
COL4A3BP-204ENST00000405807 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
COL4A3BP-204ENST00000405807 KDM5CP41229 1560 aa21.36■■□□□ 1.01
COL4A3BP-204ENST00000405807 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
COL4A3BP-204ENST00000405807 BRD4O60885 1362 aaPredicted RBP21.35■■□□□ 1.01
COL4A3BP-204ENST00000405807 RRP1P56182 461 aaKnown RBP21.34■■□□□ 1.01
COL4A3BP-204ENST00000405807 PKD2Q13563 968 aa21.34■■□□□ 1.01
COL4A3BP-204ENST00000405807 RALBP1Q15311 655 aa21.33■■□□□ 1.01
COL4A3BP-204ENST00000405807 MYBBP1AQ9BQG0 1328 aaKnown RBP21.33■■□□□ 1
COL4A3BP-204ENST00000405807 UHRF1BP1Q6BDS2 1440 aa21.32■■□□□ 1
COL4A3BP-204ENST00000405807 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
COL4A3BP-204ENST00000405807 ARXQ96QS3 562 aa21.32■■□□□ 1
COL4A3BP-204ENST00000405807 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
COL4A3BP-204ENST00000405807 PBRM1Q86U86 1689 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms