RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
NUP43-204ENST00000403890 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
NUP43-204ENST00000403890 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
NUP43-204ENST00000403890 APLP2Q06481 763 aa16.05■□□□□ 0.16
NUP43-204ENST00000403890 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
NUP43-204ENST00000403890 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
NUP43-204ENST00000403890 FANCAO15360 1455 aa16.03■□□□□ 0.16
NUP43-204ENST00000403890 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
NUP43-204ENST00000403890 DSG3P32926 999 aa16.02■□□□□ 0.16
NUP43-204ENST00000403890 MLECQ14165 292 aa16.02■□□□□ 0.16
NUP43-204ENST00000403890 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.15
NUP43-204ENST00000403890 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
NUP43-204ENST00000403890 YEATS2Q9ULM3 1422 aa16.01■□□□□ 0.15
NUP43-204ENST00000403890 SPATA31D1Q6ZQQ2 1576 aa15.98■□□□□ 0.15
NUP43-204ENST00000403890 RICTORQ6R327 1708 aa15.97■□□□□ 0.15
NUP43-204ENST00000403890 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
NUP43-204ENST00000403890 MAGI2Q86UL8 1455 aa15.95■□□□□ 0.14
NUP43-204ENST00000403890 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
NUP43-204ENST00000403890 ZFYVE16Q7Z3T8 1539 aa15.94■□□□□ 0.14
NUP43-204ENST00000403890 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
NUP43-204ENST00000403890 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
NUP43-204ENST00000403890 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
NUP43-204ENST00000403890 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
NUP43-204ENST00000403890 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
NUP43-204ENST00000403890 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
NUP43-204ENST00000403890 FER1L4A9Z1Z3 1794 aa15.9■□□□□ 0.14
NUP43-204ENST00000403890 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
NUP43-204ENST00000403890 CFAP74Q9C0B2 1584 aa15.89■□□□□ 0.13
NUP43-204ENST00000403890 STRCQ7RTU9 1775 aa15.89■□□□□ 0.13
NUP43-204ENST00000403890 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
NUP43-204ENST00000403890 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
NUP43-204ENST00000403890 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
NUP43-204ENST00000403890 ARHGEF12Q9NZN5 1544 aa15.88■□□□□ 0.13
NUP43-204ENST00000403890 PTPRTO14522 1441 aa15.87■□□□□ 0.13
NUP43-204ENST00000403890 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
NUP43-204ENST00000403890 ATP10AO60312 1499 aa15.86■□□□□ 0.13
NUP43-204ENST00000403890 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
NUP43-204ENST00000403890 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
NUP43-204ENST00000403890 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
NUP43-204ENST00000403890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.85■□□□□ 0.13
NUP43-204ENST00000403890 SAMD9Q5K651 1589 aa15.83■□□□□ 0.13
NUP43-204ENST00000403890 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.12
NUP43-204ENST00000403890 IQSEC2Q5JU85 1478 aa15.83■□□□□ 0.12
NUP43-204ENST00000403890 LTBP4Q8N2S1 1624 aa15.8■□□□□ 0.12
NUP43-204ENST00000403890 RANGAP1P46060 587 aaPredicted RBP15.8■□□□□ 0.12
NUP43-204ENST00000403890 PLCH2O75038 1416 aa15.79■□□□□ 0.12
NUP43-204ENST00000403890 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
NUP43-204ENST00000403890 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
NUP43-204ENST00000403890 UBAP1LF5GYI3 381 aa15.76■□□□□ 0.11
NUP43-204ENST00000403890 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
NUP43-204ENST00000403890 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
NUP43-204ENST00000403890 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
NUP43-204ENST00000403890 TRAPPC8Q9Y2L5 1435 aa15.74■□□□□ 0.11
NUP43-204ENST00000403890 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
NUP43-204ENST00000403890 NCOA1Q15788 1441 aa15.73■□□□□ 0.11
NUP43-204ENST00000403890 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.1
NUP43-204ENST00000403890 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
NUP43-204ENST00000403890 POTEHQ6S545 545 aa15.67■□□□□ 0.1
NUP43-204ENST00000403890 C3P01024 1663 aa15.67■□□□□ 0.1
NUP43-204ENST00000403890 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
NUP43-204ENST00000403890 NCKAP5LQ9HCH0 1330 aa15.66■□□□□ 0.1
NUP43-204ENST00000403890 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
NUP43-204ENST00000403890 KDM5CP41229 1560 aa15.64■□□□□ 0.09
NUP43-204ENST00000403890 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
NUP43-204ENST00000403890 REREQ9P2R6 1566 aa15.64■□□□□ 0.09
NUP43-204ENST00000403890 ABCB7O75027 752 aa15.63■□□□□ 0.09
NUP43-204ENST00000403890 PKD2Q13563 968 aa15.63■□□□□ 0.09
NUP43-204ENST00000403890 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
NUP43-204ENST00000403890 CAMSAP1Q5T5Y3 1602 aa15.63■□□□□ 0.09
NUP43-204ENST00000403890 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
NUP43-204ENST00000403890 HSPA1LP34931 641 aa15.62■□□□□ 0.09
NUP43-204ENST00000403890 AGLP35573 1532 aa15.62■□□□□ 0.09
NUP43-204ENST00000403890 MLH3Q9UHC1 1453 aa15.61■□□□□ 0.09
NUP43-204ENST00000403890 MYO5CQ9NQX4 1742 aa15.61■□□□□ 0.09
NUP43-204ENST00000403890 NPATQ14207 1427 aa15.6■□□□□ 0.09
NUP43-204ENST00000403890 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
NUP43-204ENST00000403890 PIP4K2BP78356 416 aa15.58■□□□□ 0.08
NUP43-204ENST00000403890 ZMYM3Q14202 1370 aa15.58■□□□□ 0.08
NUP43-204ENST00000403890 MED1Q15648 1581 aaPredicted RBP15.58■□□□□ 0.08
NUP43-204ENST00000403890 TOM1O60784 492 aa15.57■□□□□ 0.08
NUP43-204ENST00000403890 ABCA6Q8N139 1617 aa15.56■□□□□ 0.08
NUP43-204ENST00000403890 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
NUP43-204ENST00000403890 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
NUP43-204ENST00000403890 KIF14Q15058 1648 aa15.54■□□□□ 0.08
NUP43-204ENST00000403890 CLIP1P30622 1438 aa15.52■□□□□ 0.08
NUP43-204ENST00000403890 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
NUP43-204ENST00000403890 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.07
NUP43-204ENST00000403890 EEA1Q15075 1411 aa15.51■□□□□ 0.07
NUP43-204ENST00000403890 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
NUP43-204ENST00000403890 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
NUP43-204ENST00000403890 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
NUP43-204ENST00000403890 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
NUP43-204ENST00000403890 ABCC1P33527 1531 aa15.46■□□□□ 0.07
NUP43-204ENST00000403890 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.06
NUP43-204ENST00000403890 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
NUP43-204ENST00000403890 PTPRKQ15262 1439 aa15.45■□□□□ 0.06
NUP43-204ENST00000403890 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
NUP43-204ENST00000403890 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
NUP43-204ENST00000403890 CPS1P31327 1500 aa15.44■□□□□ 0.06
NUP43-204ENST00000403890 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms