RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
C4orf3-201ENST00000399075 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
C4orf3-201ENST00000399075 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
C4orf3-201ENST00000399075 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
C4orf3-201ENST00000399075 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
C4orf3-201ENST00000399075 ERCC6Q03468 1493 aa16.02■□□□□ 0.16
C4orf3-201ENST00000399075 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
C4orf3-201ENST00000399075 NUP160Q12769 1436 aa16.01■□□□□ 0.15
C4orf3-201ENST00000399075 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
C4orf3-201ENST00000399075 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
C4orf3-201ENST00000399075 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
C4orf3-201ENST00000399075 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
C4orf3-201ENST00000399075 CAMSAP2Q08AD1 1489 aa15.98■□□□□ 0.15
C4orf3-201ENST00000399075 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
C4orf3-201ENST00000399075 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
C4orf3-201ENST00000399075 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
C4orf3-201ENST00000399075 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
C4orf3-201ENST00000399075 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.15
C4orf3-201ENST00000399075 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.15
C4orf3-201ENST00000399075 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
C4orf3-201ENST00000399075 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
C4orf3-201ENST00000399075 KIF14Q15058 1648 aa15.94■□□□□ 0.14
C4orf3-201ENST00000399075 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
C4orf3-201ENST00000399075 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
C4orf3-201ENST00000399075 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
C4orf3-201ENST00000399075 ABCA8O94911 1581 aa15.93■□□□□ 0.14
C4orf3-201ENST00000399075 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
C4orf3-201ENST00000399075 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
C4orf3-201ENST00000399075 PZPP20742 1482 aa15.92■□□□□ 0.14
C4orf3-201ENST00000399075 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
C4orf3-201ENST00000399075 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
C4orf3-201ENST00000399075 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
C4orf3-201ENST00000399075 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
C4orf3-201ENST00000399075 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
C4orf3-201ENST00000399075 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
C4orf3-201ENST00000399075 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
C4orf3-201ENST00000399075 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
C4orf3-201ENST00000399075 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
C4orf3-201ENST00000399075 FOXD1Q16676 465 aa15.87■□□□□ 0.13
C4orf3-201ENST00000399075 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
C4orf3-201ENST00000399075 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
C4orf3-201ENST00000399075 MBD5Q9P267 1494 aa15.86■□□□□ 0.13
C4orf3-201ENST00000399075 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
C4orf3-201ENST00000399075 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
C4orf3-201ENST00000399075 ATP10BO94823 1461 aa15.83■□□□□ 0.13
C4orf3-201ENST00000399075 NBPF8Q3BBV2 869 aa15.83■□□□□ 0.12
C4orf3-201ENST00000399075 KDM5DQ9BY66 1539 aa15.82■□□□□ 0.12
C4orf3-201ENST00000399075 NEFLP07196 543 aa15.81■□□□□ 0.12
C4orf3-201ENST00000399075 FBLN2P98095 1184 aa15.81■□□□□ 0.12
C4orf3-201ENST00000399075 FKBP8Q14318 412 aa15.81■□□□□ 0.12
C4orf3-201ENST00000399075 ARHGEF5Q12774 1597 aa15.81■□□□□ 0.12
C4orf3-201ENST00000399075 ANKRD50Q9ULJ7 1429 aa15.81■□□□□ 0.12
C4orf3-201ENST00000399075 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
C4orf3-201ENST00000399075 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
C4orf3-201ENST00000399075 C9orf84Q5VXU9 1444 aa15.79■□□□□ 0.12
C4orf3-201ENST00000399075 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
C4orf3-201ENST00000399075 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.11
C4orf3-201ENST00000399075 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
C4orf3-201ENST00000399075 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
C4orf3-201ENST00000399075 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
C4orf3-201ENST00000399075 PREX2Q70Z35 1606 aa15.74■□□□□ 0.11
C4orf3-201ENST00000399075 PRKRIP1Q9H875 184 aaPredicted RBP15.74■□□□□ 0.11
C4orf3-201ENST00000399075 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
C4orf3-201ENST00000399075 PTPRGP23470 1445 aa15.74■□□□□ 0.11
C4orf3-201ENST00000399075 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
C4orf3-201ENST00000399075 PKD2Q13563 968 aa15.73■□□□□ 0.11
C4orf3-201ENST00000399075 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
C4orf3-201ENST00000399075 KDM5CP41229 1560 aa15.72■□□□□ 0.11
C4orf3-201ENST00000399075 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
C4orf3-201ENST00000399075 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.11
C4orf3-201ENST00000399075 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
C4orf3-201ENST00000399075 CCDC141Q6ZP82 1450 aa15.7■□□□□ 0.1
C4orf3-201ENST00000399075 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
C4orf3-201ENST00000399075 CDC42BPBQ9Y5S2 1711 aa15.7■□□□□ 0.1
C4orf3-201ENST00000399075 BCANQ96GW7 911 aa15.7■□□□□ 0.1
C4orf3-201ENST00000399075 NUP155O75694 1391 aa15.7■□□□□ 0.1
C4orf3-201ENST00000399075 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
C4orf3-201ENST00000399075 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
C4orf3-201ENST00000399075 USP47Q96K76 1375 aa15.69■□□□□ 0.1
C4orf3-201ENST00000399075 KIF15Q9NS87 1388 aa15.69■□□□□ 0.1
C4orf3-201ENST00000399075 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
C4orf3-201ENST00000399075 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
C4orf3-201ENST00000399075 CHD1O14646 1710 aa15.68■□□□□ 0.1
C4orf3-201ENST00000399075 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
C4orf3-201ENST00000399075 DHX29Q7Z478 1369 aaKnown RBP15.65■□□□□ 0.1
C4orf3-201ENST00000399075 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
C4orf3-201ENST00000399075 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
C4orf3-201ENST00000399075 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
C4orf3-201ENST00000399075 UNC13BO14795 1591 aa15.64■□□□□ 0.09
C4orf3-201ENST00000399075 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
C4orf3-201ENST00000399075 ZBED9Q6R2W3 1325 aa15.63■□□□□ 0.09
C4orf3-201ENST00000399075 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
C4orf3-201ENST00000399075 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
C4orf3-201ENST00000399075 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
C4orf3-201ENST00000399075 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
C4orf3-201ENST00000399075 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
C4orf3-201ENST00000399075 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
C4orf3-201ENST00000399075 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
C4orf3-201ENST00000399075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.092e-12■■■□□ 17.5
C4orf3-201ENST00000399075 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms