RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
CYLD-202ENST00000398568 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
CYLD-202ENST00000398568 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
CYLD-202ENST00000398568 BRPF3Q9ULD4 1205 aa20.25■□□□□ 0.83
CYLD-202ENST00000398568 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
CYLD-202ENST00000398568 CARMIL2Q6F5E8 1435 aa20.22■□□□□ 0.83
CYLD-202ENST00000398568 CTTNBP2Q8WZ74 1663 aa20.22■□□□□ 0.83
CYLD-202ENST00000398568 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
CYLD-202ENST00000398568 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
CYLD-202ENST00000398568 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
CYLD-202ENST00000398568 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
CYLD-202ENST00000398568 PTPRGP23470 1445 aa20.2■□□□□ 0.82
CYLD-202ENST00000398568 GLIPR1L2Q4G1C9 344 aa20.19■□□□□ 0.82
CYLD-202ENST00000398568 ARHGAP35Q9NRY4 1499 aa20.19■□□□□ 0.82
CYLD-202ENST00000398568 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
CYLD-202ENST00000398568 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
CYLD-202ENST00000398568 GSE1Q14687 1217 aa20.17■□□□□ 0.82
CYLD-202ENST00000398568 PLB1Q6P1J6 1458 aa20.12■□□□□ 0.81
CYLD-202ENST00000398568 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
CYLD-202ENST00000398568 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
CYLD-202ENST00000398568 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
CYLD-202ENST00000398568 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
CYLD-202ENST00000398568 UGGT2Q9NYU1 1516 aa20.1■□□□□ 0.81
CYLD-202ENST00000398568 KIAA0556O60303 1618 aa20.08■□□□□ 0.81
CYLD-202ENST00000398568 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
CYLD-202ENST00000398568 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
CYLD-202ENST00000398568 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
CYLD-202ENST00000398568 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
CYLD-202ENST00000398568 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
CYLD-202ENST00000398568 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
CYLD-202ENST00000398568 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
CYLD-202ENST00000398568 PDE4AP27815 886 aa20.02■□□□□ 0.8
CYLD-202ENST00000398568 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
CYLD-202ENST00000398568 FAM43AQ8N2R8 423 aa20.02■□□□□ 0.8
CYLD-202ENST00000398568 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.79
CYLD-202ENST00000398568 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
CYLD-202ENST00000398568 FRAT1Q92837 279 aaPredicted RBP20.01■□□□□ 0.79
CYLD-202ENST00000398568 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
CYLD-202ENST00000398568 CNTLNQ9NXG0 1405 aa19.99■□□□□ 0.79
CYLD-202ENST00000398568 SAMD9Q5K651 1589 aa19.98■□□□□ 0.79
CYLD-202ENST00000398568 EIF4G2P78344 907 aaKnown RBP eCLIP19.98■□□□□ 0.79
CYLD-202ENST00000398568 NFKBIBQ15653 356 aa19.98■□□□□ 0.79
CYLD-202ENST00000398568 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
CYLD-202ENST00000398568 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
CYLD-202ENST00000398568 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
CYLD-202ENST00000398568 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
CYLD-202ENST00000398568 VSIG10Q8N0Z9 540 aa19.94■□□□□ 0.78
CYLD-202ENST00000398568 BACH2Q9BYV9 841 aa19.94■□□□□ 0.78
CYLD-202ENST00000398568 MS4A1P11836 297 aa19.93■□□□□ 0.78
CYLD-202ENST00000398568 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
CYLD-202ENST00000398568 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
CYLD-202ENST00000398568 ZMYND15Q9H091 742 aa19.89■□□□□ 0.77
CYLD-202ENST00000398568 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
CYLD-202ENST00000398568 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
CYLD-202ENST00000398568 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
CYLD-202ENST00000398568 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
CYLD-202ENST00000398568 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
CYLD-202ENST00000398568 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
CYLD-202ENST00000398568 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
CYLD-202ENST00000398568 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
CYLD-202ENST00000398568 ATP10BO94823 1461 aa19.84■□□□□ 0.77
CYLD-202ENST00000398568 RAPGEF6Q8TEU7 1601 aa19.82■□□□□ 0.76
CYLD-202ENST00000398568 FAM69CQ0P6D2 419 aa19.82■□□□□ 0.76
CYLD-202ENST00000398568 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
CYLD-202ENST00000398568 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
CYLD-202ENST00000398568 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
CYLD-202ENST00000398568 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
CYLD-202ENST00000398568 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
CYLD-202ENST00000398568 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
CYLD-202ENST00000398568 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
CYLD-202ENST00000398568 ABCA8O94911 1581 aa19.79■□□□□ 0.76
CYLD-202ENST00000398568 SLC4A3P48751 1232 aa19.79■□□□□ 0.76
CYLD-202ENST00000398568 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
CYLD-202ENST00000398568 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
CYLD-202ENST00000398568 HSP90AA2PQ14568 343 aaPredicted RBP19.77■□□□□ 0.76
CYLD-202ENST00000398568 RRP1P56182 461 aaKnown RBP19.77■□□□□ 0.75
CYLD-202ENST00000398568 ASXL2Q76L83 1435 aa19.76■□□□□ 0.75
CYLD-202ENST00000398568 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
CYLD-202ENST00000398568 NAP1L5Q96NT1 182 aaPredicted RBP19.76■□□□□ 0.75
CYLD-202ENST00000398568 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
CYLD-202ENST00000398568 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
CYLD-202ENST00000398568 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
CYLD-202ENST00000398568 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
CYLD-202ENST00000398568 HSP90AA1P07900 732 aaKnown RBP19.73■□□□□ 0.75
CYLD-202ENST00000398568 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
CYLD-202ENST00000398568 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
CYLD-202ENST00000398568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.71■□□□□ 0.75
CYLD-202ENST00000398568 RRP9O43818 475 aaKnown RBP19.7■□□□□ 0.74
CYLD-202ENST00000398568 ZCCHC11Q5TAX3 1644 aaKnown RBP19.7■□□□□ 0.74
CYLD-202ENST00000398568 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
CYLD-202ENST00000398568 L1TD1Q5T7N2 865 aaKnown RBP19.68■□□□□ 0.74
CYLD-202ENST00000398568 TMC1Q8TDI8 760 aa19.68■□□□□ 0.74
CYLD-202ENST00000398568 RCAN3Q9UKA8 241 aa19.68■□□□□ 0.74
CYLD-202ENST00000398568 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
CYLD-202ENST00000398568 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
CYLD-202ENST00000398568 RRAGDQ9NQL2 400 aaPredicted RBP19.68■□□□□ 0.74
CYLD-202ENST00000398568 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
CYLD-202ENST00000398568 MAGI3Q5TCQ9 1506 aa19.67■□□□□ 0.74
CYLD-202ENST00000398568 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
CYLD-202ENST00000398568 KIF7Q2M1P5 1343 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms