RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
VGLL3-202ENST00000398399 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
VGLL3-202ENST00000398399 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
VGLL3-202ENST00000398399 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
VGLL3-202ENST00000398399 GZF1Q9H116 711 aaPredicted RBP17.23■□□□□ 0.35
VGLL3-202ENST00000398399 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
VGLL3-202ENST00000398399 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
VGLL3-202ENST00000398399 GOLGA2Q08379 1002 aa17.21■□□□□ 0.35
VGLL3-202ENST00000398399 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
VGLL3-202ENST00000398399 ARID3AQ99856 593 aa17.21■□□□□ 0.34
VGLL3-202ENST00000398399 TEX35Q5T0J7 233 aa17.2■□□□□ 0.34
VGLL3-202ENST00000398399 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
VGLL3-202ENST00000398399 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
VGLL3-202ENST00000398399 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
VGLL3-202ENST00000398399 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
VGLL3-202ENST00000398399 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
VGLL3-202ENST00000398399 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
VGLL3-202ENST00000398399 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
VGLL3-202ENST00000398399 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
VGLL3-202ENST00000398399 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
VGLL3-202ENST00000398399 SPRYD3Q8NCJ5 442 aa17.18■□□□□ 0.34
VGLL3-202ENST00000398399 RALBP1Q15311 655 aa17.17■□□□□ 0.34
VGLL3-202ENST00000398399 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
VGLL3-202ENST00000398399 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
VGLL3-202ENST00000398399 TMF1P82094 1093 aa17.17■□□□□ 0.34
VGLL3-202ENST00000398399 GSE1Q14687 1217 aa17.17■□□□□ 0.34
VGLL3-202ENST00000398399 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.16■□□□□ 0.34
VGLL3-202ENST00000398399 ST18O60284 1047 aa17.16■□□□□ 0.34
VGLL3-202ENST00000398399 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
VGLL3-202ENST00000398399 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 TPM3P06753 285 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 KANK1Q14678 1352 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 MAP7D2Q96T17 732 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
VGLL3-202ENST00000398399 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
VGLL3-202ENST00000398399 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
VGLL3-202ENST00000398399 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
VGLL3-202ENST00000398399 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
VGLL3-202ENST00000398399 ZNF771Q7L3S4 317 aaPredicted RBP17.12■□□□□ 0.33
VGLL3-202ENST00000398399 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
VGLL3-202ENST00000398399 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
VGLL3-202ENST00000398399 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
VGLL3-202ENST00000398399 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
VGLL3-202ENST00000398399 CLSTN1O94985 981 aa17.09■□□□□ 0.33
VGLL3-202ENST00000398399 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
VGLL3-202ENST00000398399 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
VGLL3-202ENST00000398399 HDAC5Q9UQL6 1122 aa17.06■□□□□ 0.32
VGLL3-202ENST00000398399 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
VGLL3-202ENST00000398399 A0A0G2JS52 829 aa17.06■□□□□ 0.32
VGLL3-202ENST00000398399 HMMRO75330 724 aa17.05■□□□□ 0.32
VGLL3-202ENST00000398399 CWC15Q9P013 229 aaKnown RBP17.05■□□□□ 0.32
VGLL3-202ENST00000398399 TSR1Q2NL82 804 aaKnown RBP17.04■□□□□ 0.32
VGLL3-202ENST00000398399 TPM1P09493 284 aa17.04■□□□□ 0.32
VGLL3-202ENST00000398399 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
VGLL3-202ENST00000398399 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
VGLL3-202ENST00000398399 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
VGLL3-202ENST00000398399 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
VGLL3-202ENST00000398399 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
VGLL3-202ENST00000398399 CENPQQ7L2Z9 268 aaPredicted RBP17.02■□□□□ 0.31
VGLL3-202ENST00000398399 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
VGLL3-202ENST00000398399 POGKQ9P215 609 aa17■□□□□ 0.31
VGLL3-202ENST00000398399 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
VGLL3-202ENST00000398399 NPHP1O15259 732 aa16.99■□□□□ 0.31
VGLL3-202ENST00000398399 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
VGLL3-202ENST00000398399 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
VGLL3-202ENST00000398399 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
VGLL3-202ENST00000398399 ACBD3Q9H3P7 528 aa16.98■□□□□ 0.31
VGLL3-202ENST00000398399 ARGLU1Q9NWB6 273 aaPredicted RBP16.98■□□□□ 0.31
VGLL3-202ENST00000398399 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
VGLL3-202ENST00000398399 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
VGLL3-202ENST00000398399 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
VGLL3-202ENST00000398399 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
VGLL3-202ENST00000398399 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
VGLL3-202ENST00000398399 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
VGLL3-202ENST00000398399 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
VGLL3-202ENST00000398399 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
VGLL3-202ENST00000398399 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
VGLL3-202ENST00000398399 CEP89Q96ST8 783 aa16.96■□□□□ 0.3
VGLL3-202ENST00000398399 TPM2P07951 284 aa16.95■□□□□ 0.3
VGLL3-202ENST00000398399 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
VGLL3-202ENST00000398399 AK7Q96M32 723 aa16.94■□□□□ 0.3
VGLL3-202ENST00000398399 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
VGLL3-202ENST00000398399 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
VGLL3-202ENST00000398399 RRP12Q5JTH9 1297 aaKnown RBP16.92■□□□□ 0.3
VGLL3-202ENST00000398399 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
VGLL3-202ENST00000398399 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
VGLL3-202ENST00000398399 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
VGLL3-202ENST00000398399 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
VGLL3-202ENST00000398399 CDR1P51861 262 aa16.91■□□□□ 0.3
VGLL3-202ENST00000398399 IPO7O95373 1038 aaKnown RBP16.91■□□□□ 0.3
VGLL3-202ENST00000398399 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
VGLL3-202ENST00000398399 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
VGLL3-202ENST00000398399 BECN2A8MW95 431 aa16.9■□□□□ 0.3
VGLL3-202ENST00000398399 APPP05067 770 aa16.9■□□□□ 0.3
VGLL3-202ENST00000398399 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
VGLL3-202ENST00000398399 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.3
VGLL3-202ENST00000398399 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
VGLL3-202ENST00000398399 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
VGLL3-202ENST00000398399 HSP90B2PQ58FF3 399 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms