RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
TCF4-203ENST00000398339 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
TCF4-203ENST00000398339 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
TCF4-203ENST00000398339 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
TCF4-203ENST00000398339 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
TCF4-203ENST00000398339 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
TCF4-203ENST00000398339 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
TCF4-203ENST00000398339 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
TCF4-203ENST00000398339 KDM6BO15054 1643 aa11.25□□□□□ -0.61
TCF4-203ENST00000398339 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
TCF4-203ENST00000398339 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
TCF4-203ENST00000398339 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
TCF4-203ENST00000398339 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
TCF4-203ENST00000398339 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
TCF4-203ENST00000398339 NBPF8Q3BBV2 869 aa11.22□□□□□ -0.61
TCF4-203ENST00000398339 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
TCF4-203ENST00000398339 SPATA31E1Q6ZUB1 1445 aa11.21□□□□□ -0.61
TCF4-203ENST00000398339 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
TCF4-203ENST00000398339 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.62
TCF4-203ENST00000398339 RPRD2Q5VT52 1461 aaKnown RBP11.21□□□□□ -0.62
TCF4-203ENST00000398339 FOXD1Q16676 465 aa11.21□□□□□ -0.62
TCF4-203ENST00000398339 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
TCF4-203ENST00000398339 TEX14Q8IWB6 1497 aa11.2□□□□□ -0.62
TCF4-203ENST00000398339 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
TCF4-203ENST00000398339 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
TCF4-203ENST00000398339 RNF123Q5XPI4 1314 aa11.19□□□□□ -0.62
TCF4-203ENST00000398339 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
TCF4-203ENST00000398339 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
TCF4-203ENST00000398339 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
TCF4-203ENST00000398339 ARXQ96QS3 562 aa11.17□□□□□ -0.62
TCF4-203ENST00000398339 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
TCF4-203ENST00000398339 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
TCF4-203ENST00000398339 NBR1Q14596 966 aa11.17□□□□□ -0.62
TCF4-203ENST00000398339 DHX29Q7Z478 1369 aaKnown RBP11.16□□□□□ -0.62
TCF4-203ENST00000398339 EPRSP07814 1512 aaKnown RBP11.16□□□□□ -0.62
TCF4-203ENST00000398339 URB2Q14146 1524 aaKnown RBP11.16□□□□□ -0.62
TCF4-203ENST00000398339 NESP48681 1621 aa11.15□□□□□ -0.62
TCF4-203ENST00000398339 ROCK1Q13464 1354 aa11.15□□□□□ -0.62
TCF4-203ENST00000398339 IPO9Q96P70 1041 aaKnown RBP11.15□□□□□ -0.62
TCF4-203ENST00000398339 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.63
TCF4-203ENST00000398339 PDE4CQ08493 712 aa11.15□□□□□ -0.63
TCF4-203ENST00000398339 LAMC3Q9Y6N6 1575 aa11.14□□□□□ -0.63
TCF4-203ENST00000398339 DAPK1P53355 1430 aa11.13□□□□□ -0.63
TCF4-203ENST00000398339 CDK13Q14004 1512 aaKnown RBP11.12□□□□□ -0.63
TCF4-203ENST00000398339 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
TCF4-203ENST00000398339 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
TCF4-203ENST00000398339 ABCC5O15440 1437 aa11.11□□□□□ -0.63
TCF4-203ENST00000398339 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
TCF4-203ENST00000398339 WDR62O43379 1518 aa11.1□□□□□ -0.63
TCF4-203ENST00000398339 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
TCF4-203ENST00000398339 DNMT1P26358 1616 aaKnown RBP11.1□□□□□ -0.63
TCF4-203ENST00000398339 USP47Q96K76 1375 aa11.09□□□□□ -0.63
TCF4-203ENST00000398339 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
TCF4-203ENST00000398339 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
TCF4-203ENST00000398339 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
TCF4-203ENST00000398339 BCORL1Q5H9F3 1711 aa11.08□□□□□ -0.64
TCF4-203ENST00000398339 PZPP20742 1482 aa11.08□□□□□ -0.64
TCF4-203ENST00000398339 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
TCF4-203ENST00000398339 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
TCF4-203ENST00000398339 POLR3GLQ9BT43 218 aa11.06□□□□□ -0.64
TCF4-203ENST00000398339 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
TCF4-203ENST00000398339 ZNF644Q9H582 1327 aaPredicted RBP11.05□□□□□ -0.64
TCF4-203ENST00000398339 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
TCF4-203ENST00000398339 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
TCF4-203ENST00000398339 KDM5CP41229 1560 aa11.05□□□□□ -0.64
TCF4-203ENST00000398339 KIF14Q15058 1648 aa11.05□□□□□ -0.64
TCF4-203ENST00000398339 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
TCF4-203ENST00000398339 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
TCF4-203ENST00000398339 FGD1P98174 961 aa11.04□□□□□ -0.64
TCF4-203ENST00000398339 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
TCF4-203ENST00000398339 TCERG1O14776 1098 aaKnown RBP11.03□□□□□ -0.64
TCF4-203ENST00000398339 RRP1P56182 461 aaKnown RBP11.03□□□□□ -0.64
TCF4-203ENST00000398339 ZNF326Q5BKZ1 582 aaKnown RBP11.03□□□□□ -0.64
TCF4-203ENST00000398339 KIF15Q9NS87 1388 aa11.02□□□□□ -0.64
TCF4-203ENST00000398339 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.65
TCF4-203ENST00000398339 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
TCF4-203ENST00000398339 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
TCF4-203ENST00000398339 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
TCF4-203ENST00000398339 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
TCF4-203ENST00000398339 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
TCF4-203ENST00000398339 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
TCF4-203ENST00000398339 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
TCF4-203ENST00000398339 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 PBRM1Q86U86 1689 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 PDE4AP27815 886 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 PKD2Q13563 968 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 RALBP1Q15311 655 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
TCF4-203ENST00000398339 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
TCF4-203ENST00000398339 NUP153P49790 1475 aaKnown RBP10.98□□□□□ -0.65
TCF4-203ENST00000398339 CAMSAP2Q08AD1 1489 aa10.98□□□□□ -0.65
TCF4-203ENST00000398339 MS4A1P11836 297 aa10.98□□□□□ -0.65
TCF4-203ENST00000398339 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
TCF4-203ENST00000398339 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
TCF4-203ENST00000398339 BACH2Q9BYV9 841 aa10.98□□□□□ -0.65
TCF4-203ENST00000398339 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
TCF4-203ENST00000398339 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
TCF4-203ENST00000398339 USP35Q9P2H5 1018 aa10.97□□□□□ -0.65
TCF4-203ENST00000398339 PDE3BQ13370 1112 aa10.96□□□□□ -0.66
TCF4-203ENST00000398339 ARHGEF12Q9NZN5 1544 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms