RNA–Protein interactions for RNA: ENST00000398224.3

PDE9A-207, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-207ENST00000398224 TEX2Q8IWB9 1127 aa14.49□□□□□ -0.09
PDE9A-207ENST00000398224 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
PDE9A-207ENST00000398224 CHMP4BQ9H444 224 aaKnown RBP14.49□□□□□ -0.09
PDE9A-207ENST00000398224 ESPNB1AK53 854 aa14.48□□□□□ -0.09
PDE9A-207ENST00000398224 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
PDE9A-207ENST00000398224 CNTLNQ9NXG0 1405 aa14.47□□□□□ -0.09
PDE9A-207ENST00000398224 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.09
PDE9A-207ENST00000398224 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
PDE9A-207ENST00000398224 PAXIP1Q6ZW49 1069 aaPredicted RBP14.46□□□□□ -0.1
PDE9A-207ENST00000398224 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
PDE9A-207ENST00000398224 MRE11P49959 708 aa14.44□□□□□ -0.1
PDE9A-207ENST00000398224 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
PDE9A-207ENST00000398224 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
PDE9A-207ENST00000398224 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
PDE9A-207ENST00000398224 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
PDE9A-207ENST00000398224 XRCC6P12956 609 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDE9A-207ENST00000398224 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
PDE9A-207ENST00000398224 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
PDE9A-207ENST00000398224 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.41□□□□□ -0.1
PDE9A-207ENST00000398224 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
PDE9A-207ENST00000398224 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
PDE9A-207ENST00000398224 TMEM51Q9NW97 253 aa14.39□□□□□ -0.11
PDE9A-207ENST00000398224 POGKQ9P215 609 aa14.39□□□□□ -0.11
PDE9A-207ENST00000398224 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDE9A-207ENST00000398224 PPP4R3BQ5MIZ7 849 aa14.38□□□□□ -0.11
PDE9A-207ENST00000398224 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
PDE9A-207ENST00000398224 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
PDE9A-207ENST00000398224 OFD1O75665 1012 aa14.36□□□□□ -0.11
PDE9A-207ENST00000398224 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
PDE9A-207ENST00000398224 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
PDE9A-207ENST00000398224 MYH16Q9H6N6 1097 aa14.36□□□□□ -0.11
PDE9A-207ENST00000398224 PRKRIP1Q9H875 184 aaPredicted RBP14.35□□□□□ -0.11
PDE9A-207ENST00000398224 SLC20A2Q08357 652 aa14.34□□□□□ -0.11
PDE9A-207ENST00000398224 HOMEZQ8IX15 550 aa14.34□□□□□ -0.11
PDE9A-207ENST00000398224 MAP3K1Q13233 1512 aa14.34□□□□□ -0.11
PDE9A-207ENST00000398224 DYNC1I1O14576 645 aa14.33□□□□□ -0.12
PDE9A-207ENST00000398224 RIPK4P57078 832 aa14.33□□□□□ -0.12
PDE9A-207ENST00000398224 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
PDE9A-207ENST00000398224 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
PDE9A-207ENST00000398224 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
PDE9A-207ENST00000398224 FAM161AQ3B820 660 aa14.31□□□□□ -0.12
PDE9A-207ENST00000398224 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
PDE9A-207ENST00000398224 ZSCAN20P17040 1043 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-207ENST00000398224 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-207ENST00000398224 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-207ENST00000398224 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-207ENST00000398224 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
PDE9A-207ENST00000398224 WIZO95785 1651 aa14.3□□□□□ -0.12
PDE9A-207ENST00000398224 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
PDE9A-207ENST00000398224 BECN1Q14457 450 aa14.3□□□□□ -0.12
PDE9A-207ENST00000398224 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
PDE9A-207ENST00000398224 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
PDE9A-207ENST00000398224 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
PDE9A-207ENST00000398224 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.12
PDE9A-207ENST00000398224 ERBB4Q15303 1308 aa14.27□□□□□ -0.13
PDE9A-207ENST00000398224 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.13
PDE9A-207ENST00000398224 ARAP1Q96P48 1450 aa14.27□□□□□ -0.13
PDE9A-207ENST00000398224 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
PDE9A-207ENST00000398224 HS1BP3Q53T59 392 aa14.26□□□□□ -0.13
PDE9A-207ENST00000398224 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
PDE9A-207ENST00000398224 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
PDE9A-207ENST00000398224 NCOA1Q15788 1441 aa14.25□□□□□ -0.13
PDE9A-207ENST00000398224 ZSCAN30Q86W11 494 aa14.25□□□□□ -0.13
PDE9A-207ENST00000398224 CDK11BP21127 795 aaKnown RBP14.24□□□□□ -0.13
PDE9A-207ENST00000398224 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
PDE9A-207ENST00000398224 KDM5BQ9UGL1 1544 aa14.23□□□□□ -0.13
PDE9A-207ENST00000398224 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
PDE9A-207ENST00000398224 CCDC173Q0VFZ6 552 aa14.23□□□□□ -0.13
PDE9A-207ENST00000398224 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
PDE9A-207ENST00000398224 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
PDE9A-207ENST00000398224 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
PDE9A-207ENST00000398224 CCDC184Q52MB2 194 aa14.22□□□□□ -0.13
PDE9A-207ENST00000398224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDE9A-207ENST00000398224 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
PDE9A-207ENST00000398224 PPP1R9BQ96SB3 815 aa14.21□□□□□ -0.13
PDE9A-207ENST00000398224 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
PDE9A-207ENST00000398224 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
PDE9A-207ENST00000398224 C8orf34Q49A92 452 aa14.2□□□□□ -0.14
PDE9A-207ENST00000398224 RGS22Q8NE09 1264 aa14.2□□□□□ -0.14
PDE9A-207ENST00000398224 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
PDE9A-207ENST00000398224 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
PDE9A-207ENST00000398224 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
PDE9A-207ENST00000398224 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
PDE9A-207ENST00000398224 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
PDE9A-207ENST00000398224 PTMSP20962 102 aa14.19□□□□□ -0.14
PDE9A-207ENST00000398224 MMP14P50281 582 aa14.19□□□□□ -0.14
PDE9A-207ENST00000398224 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
PDE9A-207ENST00000398224 ZNF500O60304 480 aaPredicted RBP14.18□□□□□ -0.14
PDE9A-207ENST00000398224 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
PDE9A-207ENST00000398224 CCDC7Q96M83 1385 aa14.18□□□□□ -0.14
PDE9A-207ENST00000398224 DDX11L8A8MPP1 907 aa14.17□□□□□ -0.14
PDE9A-207ENST00000398224 MSNP26038 577 aaKnown RBP14.17□□□□□ -0.14
PDE9A-207ENST00000398224 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
PDE9A-207ENST00000398224 MCM4P33991 863 aa14.17□□□□□ -0.14
PDE9A-207ENST00000398224 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
PDE9A-207ENST00000398224 HSP90B1P14625 803 aaKnown RBP14.16□□□□□ -0.14
PDE9A-207ENST00000398224 MCM5P33992 734 aa14.16□□□□□ -0.14
PDE9A-207ENST00000398224 CLGNO14967 610 aa14.15□□□□□ -0.14
PDE9A-207ENST00000398224 DNTTIP2Q5QJE6 756 aaKnown RBP14.15□□□□□ -0.14
PDE9A-207ENST00000398224 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms