RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
IFT140-202ENST00000397417 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
IFT140-202ENST00000397417 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
IFT140-202ENST00000397417 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
IFT140-202ENST00000397417 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
IFT140-202ENST00000397417 AFAP1Q8N556 730 aa14.89□□□□□ -0.03
IFT140-202ENST00000397417 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
IFT140-202ENST00000397417 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
IFT140-202ENST00000397417 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
IFT140-202ENST00000397417 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
IFT140-202ENST00000397417 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
IFT140-202ENST00000397417 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
IFT140-202ENST00000397417 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
IFT140-202ENST00000397417 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
IFT140-202ENST00000397417 TRAK1Q9UPV9 953 aa14.84□□□□□ -0.03
IFT140-202ENST00000397417 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
IFT140-202ENST00000397417 WASHC2CQ9Y4E1 1318 aa14.83□□□□□ -0.04
IFT140-202ENST00000397417 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
IFT140-202ENST00000397417 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
IFT140-202ENST00000397417 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
IFT140-202ENST00000397417 TMF1P82094 1093 aa14.8□□□□□ -0.04
IFT140-202ENST00000397417 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
IFT140-202ENST00000397417 NBR1Q14596 966 aa14.78□□□□□ -0.04
IFT140-202ENST00000397417 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
IFT140-202ENST00000397417 KANK1Q14678 1352 aa14.76□□□□□ -0.05
IFT140-202ENST00000397417 ARXQ96QS3 562 aa14.76□□□□□ -0.05
IFT140-202ENST00000397417 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
IFT140-202ENST00000397417 ANP32AP39687 249 aaKnown RBP14.75□□□□□ -0.05
IFT140-202ENST00000397417 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
IFT140-202ENST00000397417 CCDC146Q8IYE0 955 aa14.74□□□□□ -0.05
IFT140-202ENST00000397417 FGD6Q6ZV73 1430 aa14.74□□□□□ -0.05
IFT140-202ENST00000397417 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
IFT140-202ENST00000397417 LRRC9Q6ZRR7 1453 aa14.73□□□□□ -0.05
IFT140-202ENST00000397417 RGS3P49796 1198 aa14.73□□□□□ -0.05
IFT140-202ENST00000397417 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
IFT140-202ENST00000397417 MORC1Q86VD1 984 aa14.72□□□□□ -0.05
IFT140-202ENST00000397417 CDCA8Q53HL2 280 aa14.71□□□□□ -0.05
IFT140-202ENST00000397417 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
IFT140-202ENST00000397417 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
IFT140-202ENST00000397417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.7□□□□□ -0.06
IFT140-202ENST00000397417 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
IFT140-202ENST00000397417 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
IFT140-202ENST00000397417 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
IFT140-202ENST00000397417 RAPGEF3O95398 923 aa14.69□□□□□ -0.06
IFT140-202ENST00000397417 ZNF608Q9ULD9 1512 aaPredicted RBP14.69□□□□□ -0.06
IFT140-202ENST00000397417 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
IFT140-202ENST00000397417 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
IFT140-202ENST00000397417 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
IFT140-202ENST00000397417 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.68□□□□□ -0.06
IFT140-202ENST00000397417 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
IFT140-202ENST00000397417 PANK3Q9H999 370 aa14.67□□□□□ -0.06
IFT140-202ENST00000397417 KIF15Q9NS87 1388 aa14.66□□□□□ -0.06
IFT140-202ENST00000397417 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
IFT140-202ENST00000397417 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
IFT140-202ENST00000397417 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
IFT140-202ENST00000397417 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
IFT140-202ENST00000397417 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
IFT140-202ENST00000397417 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
IFT140-202ENST00000397417 MAPK8IP3Q9UPT6 1336 aa14.65□□□□□ -0.06
IFT140-202ENST00000397417 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
IFT140-202ENST00000397417 CDK13Q14004 1512 aaKnown RBP14.64□□□□□ -0.07
IFT140-202ENST00000397417 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
IFT140-202ENST00000397417 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
IFT140-202ENST00000397417 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
IFT140-202ENST00000397417 CASKIN1Q8WXD9 1431 aa14.62□□□□□ -0.07
IFT140-202ENST00000397417 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
IFT140-202ENST00000397417 HSP90AA1P07900 732 aaKnown RBP14.61□□□□□ -0.07
IFT140-202ENST00000397417 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
IFT140-202ENST00000397417 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
IFT140-202ENST00000397417 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
IFT140-202ENST00000397417 BCL2L13Q9BXK5 485 aa14.59□□□□□ -0.07
IFT140-202ENST00000397417 USP47Q96K76 1375 aa14.59□□□□□ -0.07
IFT140-202ENST00000397417 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
IFT140-202ENST00000397417 PLIN1O60240 522 aa14.59□□□□□ -0.07
IFT140-202ENST00000397417 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
IFT140-202ENST00000397417 PRKRIP1Q9H875 184 aaPredicted RBP14.59□□□□□ -0.07
IFT140-202ENST00000397417 WDR97A6NE52 1622 aa14.58□□□□□ -0.07
IFT140-202ENST00000397417 APBB1O00213 710 aa14.58□□□□□ -0.07
IFT140-202ENST00000397417 CFAP70Q5T0N1 1121 aa14.58□□□□□ -0.07
IFT140-202ENST00000397417 NUDCQ9Y266 331 aa14.58□□□□□ -0.07
IFT140-202ENST00000397417 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.08
IFT140-202ENST00000397417 ELL2O00472 640 aaPredicted RBP14.58□□□□□ -0.08
IFT140-202ENST00000397417 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
IFT140-202ENST00000397417 KTN1Q86UP2 1357 aaKnown RBP14.57□□□□□ -0.08
IFT140-202ENST00000397417 TPRNQ4KMQ1 711 aa14.56□□□□□ -0.08
IFT140-202ENST00000397417 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
IFT140-202ENST00000397417 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
IFT140-202ENST00000397417 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
IFT140-202ENST00000397417 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
IFT140-202ENST00000397417 MAP3K1Q13233 1512 aa14.54□□□□□ -0.08
IFT140-202ENST00000397417 TCERG1O14776 1098 aaKnown RBP14.54□□□□□ -0.08
IFT140-202ENST00000397417 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
IFT140-202ENST00000397417 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
IFT140-202ENST00000397417 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.09
IFT140-202ENST00000397417 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
IFT140-202ENST00000397417 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
IFT140-202ENST00000397417 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
IFT140-202ENST00000397417 NUTM2GQ5VZR2 741 aa14.51□□□□□ -0.09
IFT140-202ENST00000397417 IFT140Q96RY7 1462 aa14.51□□□□□ -0.09
IFT140-202ENST00000397417 NGDNQ8NEJ9 315 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms