RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-203ENST00000396268 KIF14Q15058 1648 aa19.8■□□□□ 0.76
CCHCR1-203ENST00000396268 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
CCHCR1-203ENST00000396268 ANP32CO43423 234 aa19.78■□□□□ 0.76
CCHCR1-203ENST00000396268 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
CCHCR1-203ENST00000396268 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
CCHCR1-203ENST00000396268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.753e-6■■■■□ 26.4
CCHCR1-203ENST00000396268 PLEKHD1A6NEE1 506 aa19.74■□□□□ 0.75
CCHCR1-203ENST00000396268 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
CCHCR1-203ENST00000396268 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
CCHCR1-203ENST00000396268 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-203ENST00000396268 NEFLP07196 543 aa19.72■□□□□ 0.75
CCHCR1-203ENST00000396268 RBM19Q9Y4C8 960 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-203ENST00000396268 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-203ENST00000396268 GPATCH8Q9UKJ3 1502 aaKnown RBP19.68■□□□□ 0.74
CCHCR1-203ENST00000396268 CCER2I3L3R5 266 aa19.68■□□□□ 0.74
CCHCR1-203ENST00000396268 CFDP1Q9UEE9 299 aaPredicted RBP19.68■□□□□ 0.74
CCHCR1-203ENST00000396268 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
CCHCR1-203ENST00000396268 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
CCHCR1-203ENST00000396268 ABCC2Q92887 1545 aa19.64■□□□□ 0.74
CCHCR1-203ENST00000396268 NAIPQ13075 1403 aa19.64■□□□□ 0.73
CCHCR1-203ENST00000396268 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
CCHCR1-203ENST00000396268 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
CCHCR1-203ENST00000396268 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
CCHCR1-203ENST00000396268 ABCC5O15440 1437 aa19.61■□□□□ 0.73
CCHCR1-203ENST00000396268 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
CCHCR1-203ENST00000396268 CAMSAP2Q08AD1 1489 aa19.6■□□□□ 0.73
CCHCR1-203ENST00000396268 KDM6BO15054 1643 aa19.6■□□□□ 0.73
CCHCR1-203ENST00000396268 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
CCHCR1-203ENST00000396268 DAPK1P53355 1430 aa19.59■□□□□ 0.73
CCHCR1-203ENST00000396268 ZCCHC11Q5TAX3 1644 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-203ENST00000396268 ITSN2Q9NZM3 1697 aa19.54■□□□□ 0.72
CCHCR1-203ENST00000396268 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCHCR1-203ENST00000396268 DNMT1P26358 1616 aaKnown RBP19.53■□□□□ 0.72
CCHCR1-203ENST00000396268 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
CCHCR1-203ENST00000396268 MSH5O43196 834 aa19.53■□□□□ 0.72
CCHCR1-203ENST00000396268 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.71
CCHCR1-203ENST00000396268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.711e-5■■■■□ 25.8
CCHCR1-203ENST00000396268 KDM5BQ9UGL1 1544 aa19.5■□□□□ 0.71
CCHCR1-203ENST00000396268 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
CCHCR1-203ENST00000396268 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
CCHCR1-203ENST00000396268 PRKCSHP14314 528 aaPredicted RBP19.47■□□□□ 0.71
CCHCR1-203ENST00000396268 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-203ENST00000396268 AKNAQ7Z591 1439 aa19.47■□□□□ 0.71
CCHCR1-203ENST00000396268 GCC2Q8IWJ2 1684 aa19.46■□□□□ 0.71
CCHCR1-203ENST00000396268 FOXD1Q16676 465 aa19.46■□□□□ 0.71
CCHCR1-203ENST00000396268 SAMD9LQ8IVG5 1584 aa19.44■□□□□ 0.7
CCHCR1-203ENST00000396268 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
CCHCR1-203ENST00000396268 WASHC2AQ641Q2 1341 aa19.43■□□□□ 0.7
CCHCR1-203ENST00000396268 PREX2Q70Z35 1606 aa19.43■□□□□ 0.7
CCHCR1-203ENST00000396268 ARHGAP5Q13017 1502 aa19.42■□□□□ 0.7
CCHCR1-203ENST00000396268 DENND4BO75064 1496 aaPredicted RBP19.42■□□□□ 0.7
CCHCR1-203ENST00000396268 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
CCHCR1-203ENST00000396268 EIF4G2P78344 907 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCHCR1-203ENST00000396268 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
CCHCR1-203ENST00000396268 MBD5Q9P267 1494 aa19.4■□□□□ 0.7
CCHCR1-203ENST00000396268 CROCC2H7BZ55 1655 aa19.39■□□□□ 0.7
CCHCR1-203ENST00000396268 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
CCHCR1-203ENST00000396268 SYCP2Q9BX26 1530 aa19.38■□□□□ 0.69
CCHCR1-203ENST00000396268 C9orf84Q5VXU9 1444 aa19.38■□□□□ 0.69
CCHCR1-203ENST00000396268 L3MBTL2Q969R5 705 aa19.37■□□□□ 0.69
CCHCR1-203ENST00000396268 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
CCHCR1-203ENST00000396268 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
CCHCR1-203ENST00000396268 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
CCHCR1-203ENST00000396268 ASXL2Q76L83 1435 aa19.35■□□□□ 0.69
CCHCR1-203ENST00000396268 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
CCHCR1-203ENST00000396268 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
CCHCR1-203ENST00000396268 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
CCHCR1-203ENST00000396268 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
CCHCR1-203ENST00000396268 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
CCHCR1-203ENST00000396268 PLCH2O75038 1416 aa19.33■□□□□ 0.69
CCHCR1-203ENST00000396268 ADGRL2O95490 1459 aa19.33■□□□□ 0.68
CCHCR1-203ENST00000396268 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
CCHCR1-203ENST00000396268 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
CCHCR1-203ENST00000396268 CCDC141Q6ZP82 1450 aa19.3■□□□□ 0.68
CCHCR1-203ENST00000396268 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-203ENST00000396268 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
CCHCR1-203ENST00000396268 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-203ENST00000396268 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
CCHCR1-203ENST00000396268 NPM1P06748 294 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCHCR1-203ENST00000396268 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
CCHCR1-203ENST00000396268 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
CCHCR1-203ENST00000396268 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
CCHCR1-203ENST00000396268 AFAP1Q8N556 730 aa19.27■□□□□ 0.68
CCHCR1-203ENST00000396268 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.68
CCHCR1-203ENST00000396268 TRAPPC8Q9Y2L5 1435 aa19.27■□□□□ 0.68
CCHCR1-203ENST00000396268 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
CCHCR1-203ENST00000396268 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-203ENST00000396268 PZPP20742 1482 aa19.25■□□□□ 0.67
CCHCR1-203ENST00000396268 CNGB1Q14028 1251 aaPredicted RBP19.24■□□□□ 0.67
CCHCR1-203ENST00000396268 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
CCHCR1-203ENST00000396268 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
CCHCR1-203ENST00000396268 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
CCHCR1-203ENST00000396268 NUP155O75694 1391 aa19.21■□□□□ 0.67
CCHCR1-203ENST00000396268 ABCC1P33527 1531 aa19.21■□□□□ 0.67
CCHCR1-203ENST00000396268 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
CCHCR1-203ENST00000396268 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
CCHCR1-203ENST00000396268 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
CCHCR1-203ENST00000396268 FANCAO15360 1455 aa19.2■□□□□ 0.66
CCHCR1-203ENST00000396268 PKD2Q13563 968 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms