RNA–Protein interactions for RNA: ENST00000395530.6

SPECC1-206, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 8,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-206ENST00000395530 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
SPECC1-206ENST00000395530 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
SPECC1-206ENST00000395530 ROCK2O75116 1388 aaKnown RBP16.92■□□□□ 0.3
SPECC1-206ENST00000395530 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
SPECC1-206ENST00000395530 ANP32BQ92688 251 aaKnown RBP16.92■□□□□ 0.3
SPECC1-206ENST00000395530 RAD54L2Q9Y4B4 1467 aa16.92■□□□□ 0.3
SPECC1-206ENST00000395530 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
SPECC1-206ENST00000395530 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
SPECC1-206ENST00000395530 HDGFL2Q7Z4V5 671 aaPredicted RBP16.9■□□□□ 0.3
SPECC1-206ENST00000395530 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
SPECC1-206ENST00000395530 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
SPECC1-206ENST00000395530 NPHP1O15259 732 aa16.85■□□□□ 0.29
SPECC1-206ENST00000395530 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
SPECC1-206ENST00000395530 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
SPECC1-206ENST00000395530 IGF1RP08069 1367 aa16.83■□□□□ 0.29
SPECC1-206ENST00000395530 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPECC1-206ENST00000395530 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
SPECC1-206ENST00000395530 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
SPECC1-206ENST00000395530 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
SPECC1-206ENST00000395530 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
SPECC1-206ENST00000395530 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
SPECC1-206ENST00000395530 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
SPECC1-206ENST00000395530 MS4A1P11836 297 aa16.78■□□□□ 0.28
SPECC1-206ENST00000395530 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.27
SPECC1-206ENST00000395530 PRDM2Q13029 1718 aa16.77■□□□□ 0.27
SPECC1-206ENST00000395530 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
SPECC1-206ENST00000395530 BECN1Q14457 450 aa16.75■□□□□ 0.27
SPECC1-206ENST00000395530 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
SPECC1-206ENST00000395530 OS9Q13438 667 aaPredicted RBP16.74■□□□□ 0.27
SPECC1-206ENST00000395530 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
SPECC1-206ENST00000395530 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
SPECC1-206ENST00000395530 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SPECC1-206ENST00000395530 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
SPECC1-206ENST00000395530 CFTRP13569 1480 aa16.72■□□□□ 0.27
SPECC1-206ENST00000395530 NESP48681 1621 aa16.72■□□□□ 0.27
SPECC1-206ENST00000395530 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
SPECC1-206ENST00000395530 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
SPECC1-206ENST00000395530 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.26
SPECC1-206ENST00000395530 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
SPECC1-206ENST00000395530 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
SPECC1-206ENST00000395530 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
SPECC1-206ENST00000395530 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPECC1-206ENST00000395530 RALBP1Q15311 655 aa16.7■□□□□ 0.26
SPECC1-206ENST00000395530 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
SPECC1-206ENST00000395530 NBR1Q14596 966 aa16.68■□□□□ 0.26
SPECC1-206ENST00000395530 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
SPECC1-206ENST00000395530 TRAK1Q9UPV9 953 aa16.66■□□□□ 0.26
SPECC1-206ENST00000395530 RGS3P49796 1198 aa16.66■□□□□ 0.26
SPECC1-206ENST00000395530 CUX1P39880 1505 aa16.65■□□□□ 0.26
SPECC1-206ENST00000395530 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
SPECC1-206ENST00000395530 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
SPECC1-206ENST00000395530 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
SPECC1-206ENST00000395530 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
SPECC1-206ENST00000395530 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
SPECC1-206ENST00000395530 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
SPECC1-206ENST00000395530 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
SPECC1-206ENST00000395530 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
SPECC1-206ENST00000395530 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
SPECC1-206ENST00000395530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPECC1-206ENST00000395530 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
SPECC1-206ENST00000395530 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
SPECC1-206ENST00000395530 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
SPECC1-206ENST00000395530 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
SPECC1-206ENST00000395530 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.25
SPECC1-206ENST00000395530 AMPHP49418 695 aa16.58■□□□□ 0.24
SPECC1-206ENST00000395530 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.24
SPECC1-206ENST00000395530 KIF21BO75037 1637 aa16.57■□□□□ 0.24
SPECC1-206ENST00000395530 KIF15Q9NS87 1388 aa16.57■□□□□ 0.24
SPECC1-206ENST00000395530 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SPECC1-206ENST00000395530 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
SPECC1-206ENST00000395530 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
SPECC1-206ENST00000395530 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
SPECC1-206ENST00000395530 KCNJ4P48050 445 aa16.56■□□□□ 0.24
SPECC1-206ENST00000395530 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
SPECC1-206ENST00000395530 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
SPECC1-206ENST00000395530 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
SPECC1-206ENST00000395530 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
SPECC1-206ENST00000395530 FGD1P98174 961 aa16.54■□□□□ 0.24
SPECC1-206ENST00000395530 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
SPECC1-206ENST00000395530 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
SPECC1-206ENST00000395530 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
SPECC1-206ENST00000395530 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
SPECC1-206ENST00000395530 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
SPECC1-206ENST00000395530 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
SPECC1-206ENST00000395530 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
SPECC1-206ENST00000395530 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
SPECC1-206ENST00000395530 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
SPECC1-206ENST00000395530 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
SPECC1-206ENST00000395530 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
SPECC1-206ENST00000395530 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
SPECC1-206ENST00000395530 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
SPECC1-206ENST00000395530 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
SPECC1-206ENST00000395530 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
SPECC1-206ENST00000395530 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
SPECC1-206ENST00000395530 PANK3Q9H999 370 aa16.49■□□□□ 0.23
SPECC1-206ENST00000395530 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
SPECC1-206ENST00000395530 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
SPECC1-206ENST00000395530 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
SPECC1-206ENST00000395530 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
SPECC1-206ENST00000395530 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms