RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 CC2D2AQ9P2K1 1620 aa6.67□□□□□ -1.34
A1CF-207ENST00000395495 POGKQ9P215 609 aa6.67□□□□□ -1.34
A1CF-207ENST00000395495 CADPSQ9ULU8 1353 aa6.67□□□□□ -1.34
A1CF-207ENST00000395495 ERICH6BQ5W0A0 696 aa6.67□□□□□ -1.34
A1CF-207ENST00000395495 PPM1GO15355 546 aaPredicted RBP6.67□□□□□ -1.34
A1CF-207ENST00000395495 TPRNQ4KMQ1 711 aa6.66□□□□□ -1.34
A1CF-207ENST00000395495 CWC22Q9HCG8 908 aaKnown RBP6.66□□□□□ -1.34
A1CF-207ENST00000395495 PLEKHD1A6NEE1 506 aa6.65□□□□□ -1.34
A1CF-207ENST00000395495 TPM4P67936 248 aa6.65□□□□□ -1.34
A1CF-207ENST00000395495 GOLGA6L1Q8N7Z2 621 aa6.65□□□□□ -1.34
A1CF-207ENST00000395495 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
A1CF-207ENST00000395495 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.35
A1CF-207ENST00000395495 RXRBP28702 533 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
A1CF-207ENST00000395495 CEP164Q9UPV0 1460 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 KDM2AQ9Y2K7 1162 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 MARCH6O60337 910 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 GGT6Q6P531 493 aa6.64□□□□□ -1.35
A1CF-207ENST00000395495 HDAC5Q9UQL6 1122 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 GTF3C3Q9Y5Q9 886 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 MSH5O43196 834 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 RASSF8Q8NHQ8 419 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 PDE4CQ08493 712 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 NGLY1Q96IV0 654 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 LAS1LQ9Y4W2 734 aaKnown RBP6.63□□□□□ -1.35
A1CF-207ENST00000395495 MRS2Q9HD23 443 aa6.63□□□□□ -1.35
A1CF-207ENST00000395495 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
A1CF-207ENST00000395495 PPP6R1Q9UPN7 881 aa6.62□□□□□ -1.35
A1CF-207ENST00000395495 HSP90AB1P08238 724 aaKnown RBP6.62□□□□□ -1.35
A1CF-207ENST00000395495 CSB-PGBD3P0DP91 1061 aa6.62□□□□□ -1.35
A1CF-207ENST00000395495 CALRP27797 417 aaKnown RBP6.61□□□□□ -1.35
A1CF-207ENST00000395495 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 KIAA1211Q6ZU35 1233 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 C16orf71Q8IYS4 520 aaPredicted RBP6.61□□□□□ -1.35
A1CF-207ENST00000395495 NBR1Q14596 966 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 CSRNP3Q8WYN3 585 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 GORABQ5T7V8 394 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 TPM3P06753 285 aa6.61□□□□□ -1.35
A1CF-207ENST00000395495 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.61□□□□□ -1.35
A1CF-207ENST00000395495 PPP4R2Q9NY27 417 aa6.6□□□□□ -1.35
A1CF-207ENST00000395495 RTF1Q92541 710 aaKnown RBP6.6□□□□□ -1.35
A1CF-207ENST00000395495 TRIM34Q9BYJ4 488 aa6.6□□□□□ -1.35
A1CF-207ENST00000395495 LOC105371045A0A1W2PR82 267 aa6.6□□□□□ -1.35
A1CF-207ENST00000395495 GTF2E1P29083 439 aaPredicted RBP6.6□□□□□ -1.35
A1CF-207ENST00000395495 TAF7LQ5H9L4 462 aa6.6□□□□□ -1.35
A1CF-207ENST00000395495 MRC2Q9UBG0 1479 aa6.59□□□□□ -1.35
A1CF-207ENST00000395495 NBPF8Q3BBV2 869 aa6.59□□□□□ -1.35
A1CF-207ENST00000395495 NBPF14Q5TI25 921 aa6.59□□□□□ -1.35
A1CF-207ENST00000395495 CEBPAP49715 358 aaPredicted RBP6.59□□□□□ -1.35
A1CF-207ENST00000395495 PROSER2Q86WR7 435 aaPredicted RBP6.59□□□□□ -1.35
A1CF-207ENST00000395495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.59□□□□□ -1.35
A1CF-207ENST00000395495 POGZQ7Z3K3 1410 aa6.59□□□□□ -1.35
A1CF-207ENST00000395495 SETQ01105 290 aaPredicted RBP6.58□□□□□ -1.36
A1CF-207ENST00000395495 NAP1L5Q96NT1 182 aaPredicted RBP6.58□□□□□ -1.36
A1CF-207ENST00000395495 ZNF330Q9Y3S2 320 aaPredicted RBP6.58□□□□□ -1.36
A1CF-207ENST00000395495 NESP48681 1621 aa6.58□□□□□ -1.36
A1CF-207ENST00000395495 GPATCH3Q96I76 525 aa6.58□□□□□ -1.36
A1CF-207ENST00000395495 TNNT3P45378 269 aaPredicted RBP6.58□□□□□ -1.36
A1CF-207ENST00000395495 BAG6P46379 1132 aa6.58□□□□□ -1.36
A1CF-207ENST00000395495 PTMSP20962 102 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 HSPA1LP34931 641 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 ZNF772Q68DY9 489 aaPredicted RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 TPM2P07951 284 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 FBXO3Q9UK99 471 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 AMOTL1Q8IY63 956 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 RRP12Q5JTH9 1297 aaKnown RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 CHMP4CQ96CF2 233 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 MSNP26038 577 aaKnown RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 R3HCC1Q9Y3T6 440 aaKnown RBP6.57□□□□□ -1.36
A1CF-207ENST00000395495 HSCBQ8IWL3 235 aa6.57□□□□□ -1.36
A1CF-207ENST00000395495 WASHC2AQ641Q2 1341 aa6.56□□□□□ -1.36
A1CF-207ENST00000395495 CHIC2Q9UKJ5 165 aa6.56□□□□□ -1.36
A1CF-207ENST00000395495 KIF3AQ9Y496 699 aa6.56□□□□□ -1.36
A1CF-207ENST00000395495 TSR1Q2NL82 804 aaKnown RBP6.56□□□□□ -1.36
A1CF-207ENST00000395495 PAF1Q8N7H5 531 aa6.56□□□□□ -1.36
A1CF-207ENST00000395495 ATF3P18847 181 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 CALD1Q05682 793 aaKnown RBP6.55□□□□□ -1.36
A1CF-207ENST00000395495 MTUS2Q5JR59 1369 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 CCDC70Q6NSX1 233 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 SOGA1O94964 1423 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 SYAP1Q96A49 352 aaPredicted RBP6.55□□□□□ -1.36
A1CF-207ENST00000395495 NCKAP5LQ9HCH0 1330 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 CCDC43Q96MW1 224 aaKnown RBP6.55□□□□□ -1.36
A1CF-207ENST00000395495 KANK1Q14678 1352 aa6.55□□□□□ -1.36
A1CF-207ENST00000395495 WWC2Q6AWC2 1192 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 EIF4G1Q04637 1599 aaKnown RBP6.54□□□□□ -1.36
A1CF-207ENST00000395495 CSPP1Q1MSJ5 1256 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 RDXP35241 583 aaKnown RBP6.54□□□□□ -1.36
A1CF-207ENST00000395495 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
A1CF-207ENST00000395495 GPR162Q16538 588 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
A1CF-207ENST00000395495 WWC1Q8IX03 1113 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 ANKLE2Q86XL3 938 aa6.54□□□□□ -1.36
A1CF-207ENST00000395495 CCDC47Q96A33 483 aaKnown RBP6.53□□□□□ -1.36
A1CF-207ENST00000395495 TPM1P09493 284 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms