RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
CLIP2-203ENST00000395060 NCOA2Q15596 1464 aa19.44■□□□□ 0.7
CLIP2-203ENST00000395060 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
CLIP2-203ENST00000395060 KIF7Q2M1P5 1343 aa19.43■□□□□ 0.7
CLIP2-203ENST00000395060 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
CLIP2-203ENST00000395060 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
CLIP2-203ENST00000395060 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
CLIP2-203ENST00000395060 MYOM3Q5VTT5 1437 aa19.4■□□□□ 0.7
CLIP2-203ENST00000395060 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
CLIP2-203ENST00000395060 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
CLIP2-203ENST00000395060 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
CLIP2-203ENST00000395060 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
CLIP2-203ENST00000395060 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
CLIP2-203ENST00000395060 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
CLIP2-203ENST00000395060 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
CLIP2-203ENST00000395060 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
CLIP2-203ENST00000395060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLIP2-203ENST00000395060 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
CLIP2-203ENST00000395060 MAGI3Q5TCQ9 1506 aa19.35■□□□□ 0.69
CLIP2-203ENST00000395060 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
CLIP2-203ENST00000395060 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-203ENST00000395060 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.68
CLIP2-203ENST00000395060 DENND4BO75064 1496 aaPredicted RBP19.33■□□□□ 0.68
CLIP2-203ENST00000395060 KDM6BO15054 1643 aa19.33■□□□□ 0.68
CLIP2-203ENST00000395060 IQGAP2Q13576 1575 aa19.33■□□□□ 0.68
CLIP2-203ENST00000395060 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
CLIP2-203ENST00000395060 IPO9Q96P70 1041 aaKnown RBP19.32■□□□□ 0.68
CLIP2-203ENST00000395060 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
CLIP2-203ENST00000395060 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
CLIP2-203ENST00000395060 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
CLIP2-203ENST00000395060 NCOA1Q15788 1441 aa19.3■□□□□ 0.68
CLIP2-203ENST00000395060 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
CLIP2-203ENST00000395060 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-203ENST00000395060 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
CLIP2-203ENST00000395060 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
CLIP2-203ENST00000395060 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
CLIP2-203ENST00000395060 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
CLIP2-203ENST00000395060 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
CLIP2-203ENST00000395060 EXOC6Q8TAG9 804 aa19.26■□□□□ 0.67
CLIP2-203ENST00000395060 EHBP1L1Q8N3D4 1523 aa19.26■□□□□ 0.67
CLIP2-203ENST00000395060 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
CLIP2-203ENST00000395060 THOC2Q8NI27 1593 aaKnown RBP19.22■□□□□ 0.67
CLIP2-203ENST00000395060 UGGT2Q9NYU1 1516 aa19.22■□□□□ 0.67
CLIP2-203ENST00000395060 NEFMP07197 916 aa19.2■□□□□ 0.66
CLIP2-203ENST00000395060 PLIN1O60240 522 aa19.2■□□□□ 0.66
CLIP2-203ENST00000395060 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
CLIP2-203ENST00000395060 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
CLIP2-203ENST00000395060 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-203ENST00000395060 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
CLIP2-203ENST00000395060 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
CLIP2-203ENST00000395060 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
CLIP2-203ENST00000395060 WDR62O43379 1518 aa19.17■□□□□ 0.66
CLIP2-203ENST00000395060 ANKRD30BQ9BXX2 1392 aa19.17■□□□□ 0.66
CLIP2-203ENST00000395060 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
CLIP2-203ENST00000395060 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
CLIP2-203ENST00000395060 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-203ENST00000395060 USP47Q96K76 1375 aa19.16■□□□□ 0.66
CLIP2-203ENST00000395060 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-203ENST00000395060 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
CLIP2-203ENST00000395060 SLC4A3P48751 1232 aa19.15■□□□□ 0.66
CLIP2-203ENST00000395060 PRKCSHP14314 528 aaPredicted RBP19.14■□□□□ 0.66
CLIP2-203ENST00000395060 PKD2Q13563 968 aa19.14■□□□□ 0.65
CLIP2-203ENST00000395060 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
CLIP2-203ENST00000395060 CARD11Q9BXL7 1154 aa19.14■□□□□ 0.65
CLIP2-203ENST00000395060 DHX29Q7Z478 1369 aaKnown RBP19.13■□□□□ 0.65
CLIP2-203ENST00000395060 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
CLIP2-203ENST00000395060 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
CLIP2-203ENST00000395060 PDE4AP27815 886 aa19.11■□□□□ 0.65
CLIP2-203ENST00000395060 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
CLIP2-203ENST00000395060 RRP1P56182 461 aaKnown RBP19.1■□□□□ 0.65
CLIP2-203ENST00000395060 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
CLIP2-203ENST00000395060 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
CLIP2-203ENST00000395060 SPATA31E1Q6ZUB1 1445 aa19.1■□□□□ 0.65
CLIP2-203ENST00000395060 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
CLIP2-203ENST00000395060 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
CLIP2-203ENST00000395060 TEX14Q8IWB6 1497 aa19.07■□□□□ 0.64
CLIP2-203ENST00000395060 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
CLIP2-203ENST00000395060 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
CLIP2-203ENST00000395060 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
CLIP2-203ENST00000395060 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
CLIP2-203ENST00000395060 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
CLIP2-203ENST00000395060 DCAF11Q8TEB1 546 aa19.04■□□□□ 0.64
CLIP2-203ENST00000395060 ABCC5O15440 1437 aa19.04■□□□□ 0.64
CLIP2-203ENST00000395060 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
CLIP2-203ENST00000395060 DAPK1P53355 1430 aa19.04■□□□□ 0.64
CLIP2-203ENST00000395060 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
CLIP2-203ENST00000395060 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
CLIP2-203ENST00000395060 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
CLIP2-203ENST00000395060 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-203ENST00000395060 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
CLIP2-203ENST00000395060 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
CLIP2-203ENST00000395060 BACH2Q9BYV9 841 aa18.99■□□□□ 0.63
CLIP2-203ENST00000395060 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
CLIP2-203ENST00000395060 GCC2Q8IWJ2 1684 aa18.98■□□□□ 0.63
CLIP2-203ENST00000395060 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
CLIP2-203ENST00000395060 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-203ENST00000395060 BCORL1Q5H9F3 1711 aa18.97■□□□□ 0.63
CLIP2-203ENST00000395060 HNRNPMP52272 730 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLIP2-203ENST00000395060 C20orf194Q5TEA3 1177 aa18.96■□□□□ 0.63
CLIP2-203ENST00000395060 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms