RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 PKD2Q13563 968 aa11.81□□□□□ -0.52
MATR3-201ENST00000394805 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
MATR3-201ENST00000394805 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
MATR3-201ENST00000394805 KDM6BO15054 1643 aa11.81□□□□□ -0.52
MATR3-201ENST00000394805 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
MATR3-201ENST00000394805 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
MATR3-201ENST00000394805 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
MATR3-201ENST00000394805 MAGI3Q5TCQ9 1506 aa11.8□□□□□ -0.52
MATR3-201ENST00000394805 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
MATR3-201ENST00000394805 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
MATR3-201ENST00000394805 KDM5BQ9UGL1 1544 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
MATR3-201ENST00000394805 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 EHBP1L1Q8N3D4 1523 aa11.78□□□□□ -0.52
MATR3-201ENST00000394805 DENND4BO75064 1496 aaPredicted RBP11.78□□□□□ -0.52
MATR3-201ENST00000394805 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.52
MATR3-201ENST00000394805 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
MATR3-201ENST00000394805 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
MATR3-201ENST00000394805 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
MATR3-201ENST00000394805 CUL7Q14999 1698 aa11.76□□□□□ -0.53
MATR3-201ENST00000394805 USP47Q96K76 1375 aa11.75□□□□□ -0.53
MATR3-201ENST00000394805 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
MATR3-201ENST00000394805 UGGT2Q9NYU1 1516 aa11.75□□□□□ -0.53
MATR3-201ENST00000394805 EPRSP07814 1512 aaKnown RBP11.74□□□□□ -0.53
MATR3-201ENST00000394805 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
MATR3-201ENST00000394805 LAS1LQ9Y4W2 734 aaKnown RBP11.74□□□□□ -0.53
MATR3-201ENST00000394805 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
MATR3-201ENST00000394805 EXOC6Q8TAG9 804 aa11.73□□□□□ -0.53
MATR3-201ENST00000394805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■■□□ 18.1
MATR3-201ENST00000394805 SKAP1Q86WV1 359 aa11.72□□□□□ -0.53
MATR3-201ENST00000394805 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
MATR3-201ENST00000394805 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
MATR3-201ENST00000394805 DAPK1P53355 1430 aa11.71□□□□□ -0.53
MATR3-201ENST00000394805 PLIN1O60240 522 aa11.71□□□□□ -0.53
MATR3-201ENST00000394805 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
MATR3-201ENST00000394805 ABCC5O15440 1437 aa11.7□□□□□ -0.54
MATR3-201ENST00000394805 IPO9Q96P70 1041 aaKnown RBP11.7□□□□□ -0.54
MATR3-201ENST00000394805 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
MATR3-201ENST00000394805 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
MATR3-201ENST00000394805 NUP155O75694 1391 aa11.69□□□□□ -0.54
MATR3-201ENST00000394805 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
MATR3-201ENST00000394805 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
MATR3-201ENST00000394805 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
MATR3-201ENST00000394805 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
MATR3-201ENST00000394805 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
MATR3-201ENST00000394805 TSPY4P0CV99 314 aa11.67□□□□□ -0.54
MATR3-201ENST00000394805 TSPY10P0CW01 314 aa11.67□□□□□ -0.54
MATR3-201ENST00000394805 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
MATR3-201ENST00000394805 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.544e-9■■■■■ 28.9
MATR3-201ENST00000394805 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
MATR3-201ENST00000394805 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
MATR3-201ENST00000394805 HECW1Q76N89 1606 aa11.66□□□□□ -0.54
MATR3-201ENST00000394805 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
MATR3-201ENST00000394805 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
MATR3-201ENST00000394805 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.55
MATR3-201ENST00000394805 TEX14Q8IWB6 1497 aa11.64□□□□□ -0.55
MATR3-201ENST00000394805 SPATA31E1Q6ZUB1 1445 aa11.64□□□□□ -0.55
MATR3-201ENST00000394805 PLEKHD1A6NEE1 506 aa11.64□□□□□ -0.55
MATR3-201ENST00000394805 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
MATR3-201ENST00000394805 NEFMP07197 916 aa11.63□□□□□ -0.55
MATR3-201ENST00000394805 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
MATR3-201ENST00000394805 ROCK2O75116 1388 aaKnown RBP11.62□□□□□ -0.55
MATR3-201ENST00000394805 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
MATR3-201ENST00000394805 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
MATR3-201ENST00000394805 PDE4AP27815 886 aa11.62□□□□□ -0.55
MATR3-201ENST00000394805 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
MATR3-201ENST00000394805 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
MATR3-201ENST00000394805 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
MATR3-201ENST00000394805 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
MATR3-201ENST00000394805 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
MATR3-201ENST00000394805 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
MATR3-201ENST00000394805 KIF15Q9NS87 1388 aa11.6□□□□□ -0.55
MATR3-201ENST00000394805 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
MATR3-201ENST00000394805 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
MATR3-201ENST00000394805 ANKRD50Q9ULJ7 1429 aa11.59□□□□□ -0.55
MATR3-201ENST00000394805 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
MATR3-201ENST00000394805 PZPP20742 1482 aa11.59□□□□□ -0.55
MATR3-201ENST00000394805 RALBP1Q15311 655 aa11.58□□□□□ -0.56
MATR3-201ENST00000394805 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
MATR3-201ENST00000394805 PLB1Q6P1J6 1458 aa11.58□□□□□ -0.56
MATR3-201ENST00000394805 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
MATR3-201ENST00000394805 WDR62O43379 1518 aa11.57□□□□□ -0.56
MATR3-201ENST00000394805 PANK3Q9H999 370 aa11.57□□□□□ -0.56
MATR3-201ENST00000394805 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
MATR3-201ENST00000394805 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
MATR3-201ENST00000394805 IL27Q8NEV9 243 aa11.57□□□□□ -0.56
MATR3-201ENST00000394805 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
MATR3-201ENST00000394805 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
MATR3-201ENST00000394805 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
MATR3-201ENST00000394805 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
MATR3-201ENST00000394805 RGS3P49796 1198 aa11.55□□□□□ -0.56
MATR3-201ENST00000394805 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
MATR3-201ENST00000394805 RNF123Q5XPI4 1314 aa11.54□□□□□ -0.56
MATR3-201ENST00000394805 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
MATR3-201ENST00000394805 TROQ12816 1431 aaPredicted RBP11.53□□□□□ -0.56
MATR3-201ENST00000394805 BRD4O60885 1362 aaPredicted RBP11.53□□□□□ -0.56
MATR3-201ENST00000394805 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms