RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SMG6Q86US8 1419 aaKnown RBP22.17■■□□□ 1.14
EFEMP1-202ENST00000394555 NPM2Q86SE8 214 aaKnown RBP22.17■■□□□ 1.14
EFEMP1-202ENST00000394555 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
EFEMP1-202ENST00000394555 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
EFEMP1-202ENST00000394555 HECW1Q76N89 1606 aa22.14■■□□□ 1.14
EFEMP1-202ENST00000394555 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
EFEMP1-202ENST00000394555 UGGT2Q9NYU1 1516 aa22.14■■□□□ 1.13
EFEMP1-202ENST00000394555 CUL7Q14999 1698 aa22.13■■□□□ 1.13
EFEMP1-202ENST00000394555 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
EFEMP1-202ENST00000394555 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
EFEMP1-202ENST00000394555 MAGI3Q5TCQ9 1506 aa22.13■■□□□ 1.13
EFEMP1-202ENST00000394555 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
EFEMP1-202ENST00000394555 ANKRD30BQ9BXX2 1392 aa22.09■■□□□ 1.13
EFEMP1-202ENST00000394555 GCC2Q8IWJ2 1684 aa22.08■■□□□ 1.13
EFEMP1-202ENST00000394555 TMC1Q8TDI8 760 aa22.08■■□□□ 1.12
EFEMP1-202ENST00000394555 SPATA31E1Q6ZUB1 1445 aa22.07■■□□□ 1.12
EFEMP1-202ENST00000394555 SAMD9Q5K651 1589 aa22.06■■□□□ 1.12
EFEMP1-202ENST00000394555 RPRD2Q5VT52 1461 aaKnown RBP22.06■■□□□ 1.12
EFEMP1-202ENST00000394555 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
EFEMP1-202ENST00000394555 TCOF1Q13428 1488 aaKnown RBP22.05■■□□□ 1.12
EFEMP1-202ENST00000394555 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
EFEMP1-202ENST00000394555 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
EFEMP1-202ENST00000394555 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
EFEMP1-202ENST00000394555 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
EFEMP1-202ENST00000394555 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
EFEMP1-202ENST00000394555 TEX14Q8IWB6 1497 aa22.03■■□□□ 1.12
EFEMP1-202ENST00000394555 NESP48681 1621 aa22.03■■□□□ 1.12
EFEMP1-202ENST00000394555 RTN4Q9NQC3 1192 aaKnown RBP22.02■■□□□ 1.12
EFEMP1-202ENST00000394555 PNISRQ8TF01 805 aaKnown RBP22.01■■□□□ 1.11
EFEMP1-202ENST00000394555 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
EFEMP1-202ENST00000394555 IL27Q8NEV9 243 aa22.01■■□□□ 1.11
EFEMP1-202ENST00000394555 THOC2Q8NI27 1593 aaKnown RBP22■■□□□ 1.11
EFEMP1-202ENST00000394555 EXOC6Q8TAG9 804 aa21.99■■□□□ 1.11
EFEMP1-202ENST00000394555 PRKCSHP14314 528 aaPredicted RBP21.98■■□□□ 1.11
EFEMP1-202ENST00000394555 USP47Q96K76 1375 aa21.98■■□□□ 1.11
EFEMP1-202ENST00000394555 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
EFEMP1-202ENST00000394555 NEFMP07197 916 aa21.96■■□□□ 1.11
EFEMP1-202ENST00000394555 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.11
EFEMP1-202ENST00000394555 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
EFEMP1-202ENST00000394555 EPRSP07814 1512 aaKnown RBP21.94■■□□□ 1.1
EFEMP1-202ENST00000394555 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
EFEMP1-202ENST00000394555 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
EFEMP1-202ENST00000394555 PDE4AP27815 886 aa21.92■■□□□ 1.1
EFEMP1-202ENST00000394555 DAPK1P53355 1430 aa21.92■■□□□ 1.1
EFEMP1-202ENST00000394555 POLR1AO95602 1720 aaPredicted RBP21.89■■□□□ 1.09
EFEMP1-202ENST00000394555 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.09
EFEMP1-202ENST00000394555 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.09
EFEMP1-202ENST00000394555 ABCC5O15440 1437 aa21.88■■□□□ 1.09
EFEMP1-202ENST00000394555 BCORL1Q5H9F3 1711 aa21.88■■□□□ 1.09
EFEMP1-202ENST00000394555 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
EFEMP1-202ENST00000394555 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
EFEMP1-202ENST00000394555 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
EFEMP1-202ENST00000394555 PKD2Q13563 968 aa21.86■■□□□ 1.09
EFEMP1-202ENST00000394555 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
EFEMP1-202ENST00000394555 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
EFEMP1-202ENST00000394555 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
EFEMP1-202ENST00000394555 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
EFEMP1-202ENST00000394555 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
EFEMP1-202ENST00000394555 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
EFEMP1-202ENST00000394555 PLIN1O60240 522 aa21.81■■□□□ 1.08
EFEMP1-202ENST00000394555 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
EFEMP1-202ENST00000394555 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
EFEMP1-202ENST00000394555 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
EFEMP1-202ENST00000394555 PZPP20742 1482 aa21.79■■□□□ 1.08
EFEMP1-202ENST00000394555 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
EFEMP1-202ENST00000394555 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
EFEMP1-202ENST00000394555 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
EFEMP1-202ENST00000394555 USP35Q9P2H5 1018 aa21.77■■□□□ 1.07
EFEMP1-202ENST00000394555 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.07
EFEMP1-202ENST00000394555 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.76■■□□□ 1.07
EFEMP1-202ENST00000394555 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
EFEMP1-202ENST00000394555 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
EFEMP1-202ENST00000394555 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
EFEMP1-202ENST00000394555 RALBP1Q15311 655 aa21.75■■□□□ 1.07
EFEMP1-202ENST00000394555 KIAA1107Q9UPP5 1409 aa21.74■■□□□ 1.07
EFEMP1-202ENST00000394555 DNMT1P26358 1616 aaKnown RBP21.74■■□□□ 1.07
EFEMP1-202ENST00000394555 MBD5Q9P267 1494 aa21.74■■□□□ 1.07
EFEMP1-202ENST00000394555 MS4A1P11836 297 aa21.74■■□□□ 1.07
EFEMP1-202ENST00000394555 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
EFEMP1-202ENST00000394555 KDM5CP41229 1560 aa21.72■■□□□ 1.07
EFEMP1-202ENST00000394555 WDR62O43379 1518 aa21.72■■□□□ 1.07
EFEMP1-202ENST00000394555 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
EFEMP1-202ENST00000394555 IQGAP2Q13576 1575 aa21.7■■□□□ 1.07
EFEMP1-202ENST00000394555 CRBNQ96SW2 442 aa21.69■■□□□ 1.06
EFEMP1-202ENST00000394555 NLRP13Q86W25 1043 aa21.68■■□□□ 1.06
EFEMP1-202ENST00000394555 BRPF3Q9ULD4 1205 aa21.68■■□□□ 1.06
EFEMP1-202ENST00000394555 KIF14Q15058 1648 aa21.68■■□□□ 1.06
EFEMP1-202ENST00000394555 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
EFEMP1-202ENST00000394555 CC2D1BQ5T0F9 858 aaKnown RBP21.66■■□□□ 1.06
EFEMP1-202ENST00000394555 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
EFEMP1-202ENST00000394555 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
EFEMP1-202ENST00000394555 NUP155O75694 1391 aa21.64■■□□□ 1.06
EFEMP1-202ENST00000394555 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.06
EFEMP1-202ENST00000394555 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
EFEMP1-202ENST00000394555 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
EFEMP1-202ENST00000394555 RALGAPBQ86X10 1494 aa21.62■■□□□ 1.05
EFEMP1-202ENST00000394555 GSE1Q14687 1217 aa21.62■■□□□ 1.05
EFEMP1-202ENST00000394555 NFKBIBQ15653 356 aa21.62■■□□□ 1.05
EFEMP1-202ENST00000394555 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
EFEMP1-202ENST00000394555 C20orf194Q5TEA3 1177 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1200.1 ms